RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 KRTAP11-1Q8IUC1 163 aa6.85□□□□□ -1.31
COL21A1-211ENST00000488912 ELOF1P60002 83 aaKnown RBP6.84□□□□□ -1.31
COL21A1-211ENST00000488912 RYR3Q15413 4870 aa6.84□□□□□ -1.31
COL21A1-211ENST00000488912 SPRR1AP35321 89 aa6.84□□□□□ -1.31
COL21A1-211ENST00000488912 KRTAP10-1P60331 282 aa6.84□□□□□ -1.31
COL21A1-211ENST00000488912 UBE2BP63146 152 aa6.84□□□□□ -1.31
COL21A1-211ENST00000488912 TRBV7-6A0A0J9YX20 115 aa6.83□□□□□ -1.32
COL21A1-211ENST00000488912 KRTAP4-16G5E9R7 235 aaPredicted RBP6.83□□□□□ -1.32
COL21A1-211ENST00000488912 COX7BP24311 80 aa6.83□□□□□ -1.32
COL21A1-211ENST00000488912 LINC00575Q6W349 94 aa6.83□□□□□ -1.32
COL21A1-211ENST00000488912 PLAC8Q9NZF1 115 aa6.83□□□□□ -1.32
COL21A1-211ENST00000488912 FAM30AQ9NZY2 134 aa6.83□□□□□ -1.32
COL21A1-211ENST00000488912 ATP5EP56381 51 aaPredicted RBP6.83□□□□□ -1.32
COL21A1-211ENST00000488912 REG3GQ6UW15 175 aa6.83□□□□□ -1.32
COL21A1-211ENST00000488912 A0A1B0GVY2 172 aa6.82□□□□□ -1.32
COL21A1-211ENST00000488912 LINC00528Q8N1L1 170 aa6.82□□□□□ -1.32
COL21A1-211ENST00000488912 Q6ZSA8 131 aa6.81□□□□□ -1.32
COL21A1-211ENST00000488912 FAM19A1Q7Z5A9 133 aa6.81□□□□□ -1.32
COL21A1-211ENST00000488912 ETDCA0A1B0GVM5 59 aa6.81□□□□□ -1.32
COL21A1-211ENST00000488912 NDUFC1O43677 76 aa6.81□□□□□ -1.32
COL21A1-211ENST00000488912 Q6ZRX8 168 aa6.81□□□□□ -1.32
COL21A1-211ENST00000488912 CIRBP-AS1Q8TBR5 109 aa6.79□□□□□ -1.32
COL21A1-211ENST00000488912 BRK1Q8WUW1 75 aa6.79□□□□□ -1.32
COL21A1-211ENST00000488912 LRP1BQ9NZR2 4599 aa6.79□□□□□ -1.32
COL21A1-211ENST00000488912 JMJD7-PLA2G4BH0Y9G9 81 aa6.78□□□□□ -1.32
COL21A1-211ENST00000488912 HAMPP81172 84 aa6.78□□□□□ -1.32
COL21A1-211ENST00000488912 SCXQ7RTU7 201 aa6.78□□□□□ -1.32
COL21A1-211ENST00000488912 Q9BRP9 147 aa6.78□□□□□ -1.32
COL21A1-211ENST00000488912 PRLHP81277 87 aa6.77□□□□□ -1.33
COL21A1-211ENST00000488912 ORMDL1Q9P0S3 153 aa6.77□□□□□ -1.33
COL21A1-211ENST00000488912 DYNC1H1Q14204 4646 aaKnown RBP6.77□□□□□ -1.33
COL21A1-211ENST00000488912 F8WEM9 126 aa6.77□□□□□ -1.33
COL21A1-211ENST00000488912 Q6ZQY7 126 aa6.77□□□□□ -1.33
COL21A1-211ENST00000488912 A0A0U1RQV1 116 aa6.76□□□□□ -1.33
COL21A1-211ENST00000488912 UBL5Q9BZL1 73 aa6.76□□□□□ -1.33
COL21A1-211ENST00000488912 RBM3P98179 157 aaKnown RBP6.75□□□□□ -1.33
COL21A1-211ENST00000488912 DHRS4-AS1Q9P1J3 65 aa6.75□□□□□ -1.33
COL21A1-211ENST00000488912 PSORS1C2Q9UIG4 136 aa6.75□□□□□ -1.33
COL21A1-211ENST00000488912 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.74□□□□□ -1.33
COL21A1-211ENST00000488912 ERC2-IT1O76042 136 aa6.73□□□□□ -1.33
COL21A1-211ENST00000488912 UBE2AP49459 152 aa6.72□□□□□ -1.33
COL21A1-211ENST00000488912 HIGD2AQ9BW72 106 aa6.72□□□□□ -1.33
COL21A1-211ENST00000488912 SNURFQ9Y675 71 aa6.72□□□□□ -1.33
COL21A1-211ENST00000488912 H0Y9J4 135 aa6.72□□□□□ -1.33
COL21A1-211ENST00000488912 KRTAP13-1Q8IUC0 172 aa6.72□□□□□ -1.33
COL21A1-211ENST00000488912 PRR15Q8IV56 129 aa6.72□□□□□ -1.33
COL21A1-211ENST00000488912 LAMTOR3Q9UHA4 124 aa6.72□□□□□ -1.33
COL21A1-211ENST00000488912 SRRM2Q9UQ35 2752 aaKnown RBP6.71□□□□□ -1.33
COL21A1-211ENST00000488912 TMEM256-PLSCR3K7ERE1 68 aa6.71□□□□□ -1.33
COL21A1-211ENST00000488912 C1orf137Q5JT78 98 aa6.71□□□□□ -1.33
COL21A1-211ENST00000488912 ST20-AS1Q8NBB2 130 aa6.71□□□□□ -1.33
COL21A1-211ENST00000488912 TRBV7-4A0A0J9YYF1 115 aa6.71□□□□□ -1.34
COL21A1-211ENST00000488912 PMAIP1Q13794 54 aa6.7□□□□□ -1.34
COL21A1-211ENST00000488912 DEFB105AQ8NG35 78 aa6.7□□□□□ -1.34
COL21A1-211ENST00000488912 APOBP04114 4563 aaKnown RBP6.69□□□□□ -1.34
COL21A1-211ENST00000488912 LINC01547P58512 204 aaPredicted RBP6.69□□□□□ -1.34
COL21A1-211ENST00000488912 CXCL6P80162 114 aa6.68□□□□□ -1.34
COL21A1-211ENST00000488912 LOC110117498A0A087WWA1 95 aa6.68□□□□□ -1.34
COL21A1-211ENST00000488912 FAM229BQ4G0N7 80 aa6.68□□□□□ -1.34
COL21A1-211ENST00000488912 Q6ZQT0 140 aa6.68□□□□□ -1.34
COL21A1-211ENST00000488912 Q8N377 158 aa6.68□□□□□ -1.34
COL21A1-211ENST00000488912 IGLV5-48A0A075B6I7 105 aa6.67□□□□□ -1.34
COL21A1-211ENST00000488912 H3BQ85 93 aa6.67□□□□□ -1.34
COL21A1-211ENST00000488912 VPS13BQ7Z7G8 4022 aa6.66□□□□□ -1.34
COL21A1-211ENST00000488912 IGLV7-43P04211 117 aa6.66□□□□□ -1.34
COL21A1-211ENST00000488912 ZNF861PO60384 105 aa6.65□□□□□ -1.34
COL21A1-211ENST00000488912 Q6ZVQ6 151 aa6.65□□□□□ -1.35
COL21A1-211ENST00000488912 MPLKIPQ8TAP9 179 aa6.64□□□□□ -1.35
COL21A1-211ENST00000488912 TMEM254Q8TBM7 123 aa6.64□□□□□ -1.35
COL21A1-211ENST00000488912 CD164Q04900 197 aa6.64□□□□□ -1.35
COL21A1-211ENST00000488912 SMR3BP02814 79 aaPredicted RBP6.62□□□□□ -1.35
COL21A1-211ENST00000488912 NREPQ16612 68 aa6.62□□□□□ -1.35
COL21A1-211ENST00000488912 PDE6GP18545 87 aa6.61□□□□□ -1.35
COL21A1-211ENST00000488912 SMIM29Q86T20 159 aa6.61□□□□□ -1.35
COL21A1-211ENST00000488912 Q1T7F1 81 aa6.6□□□□□ -1.35
COL21A1-211ENST00000488912 SPRR4Q96PI1 79 aa6.6□□□□□ -1.35
COL21A1-211ENST00000488912 FAT1Q14517 4588 aa6.6□□□□□ -1.35
COL21A1-211ENST00000488912 EPPK1P58107 5090 aaKnown RBP6.6□□□□□ -1.35
COL21A1-211ENST00000488912 SPRR1BP22528 89 aa6.6□□□□□ -1.35
COL21A1-211ENST00000488912 RPL37AP61513 92 aaKnown RBP6.59□□□□□ -1.36
COL21A1-211ENST00000488912 ZNF706Q9Y5V0 76 aaPredicted RBP6.58□□□□□ -1.36
COL21A1-211ENST00000488912 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
COL21A1-211ENST00000488912 BPY2O14599 106 aa6.57□□□□□ -1.36
COL21A1-211ENST00000488912 LINC00483Q53H64 154 aa6.57□□□□□ -1.36
COL21A1-211ENST00000488912 ANAPC11Q9NYG5 84 aa6.56□□□□□ -1.36
COL21A1-211ENST00000488912 OCR1Q9BZK8 76 aa6.56□□□□□ -1.36
COL21A1-211ENST00000488912 HSPG2P98160 4391 aa6.56□□□□□ -1.36
COL21A1-211ENST00000488912 CDK2AP2O75956 126 aa6.54□□□□□ -1.36
COL21A1-211ENST00000488912 RYR1P21817 5038 aa6.54□□□□□ -1.36
COL21A1-211ENST00000488912 KRTAP10-4P60372 401 aaPredicted RBP6.54□□□□□ -1.36
COL21A1-211ENST00000488912 IGLV8-61A0A075B6I0 122 aa6.53□□□□□ -1.36
COL21A1-211ENST00000488912 IGLV9-49A0A0B4J1Y8 123 aa6.53□□□□□ -1.36
COL21A1-211ENST00000488912 A0A0G2JQZ4 141 aa6.53□□□□□ -1.36
COL21A1-211ENST00000488912 KIAA1109Q2LD37 5005 aa6.52□□□□□ -1.37
COL21A1-211ENST00000488912 IGFL1Q6UW32 110 aa6.51□□□□□ -1.37
COL21A1-211ENST00000488912 A0A1W2PNM2 257 aa6.5□□□□□ -1.37
COL21A1-211ENST00000488912 IGKV4-1P06312 121 aa6.5□□□□□ -1.37
COL21A1-211ENST00000488912 SPINK6Q6UWN8 80 aa6.5□□□□□ -1.37
COL21A1-211ENST00000488912 KRTAP1-4P0C5Y4 121 aa6.49□□□□□ -1.37
COL21A1-211ENST00000488912 MOBPQ13875 183 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms