RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 LINC01600Q96MT4 127 aa7.31□□□□□ -1.24
TRAIP-209ENST00000488860 SPCS1Q9Y6A9 102 aa7.31□□□□□ -1.24
TRAIP-209ENST00000488860 MYCBP2O75592 4640 aa7.31□□□□□ -1.24
TRAIP-209ENST00000488860 MOBPQ13875 183 aa7.3□□□□□ -1.24
TRAIP-209ENST00000488860 OCIAD2Q56VL3 154 aa7.3□□□□□ -1.24
TRAIP-209ENST00000488860 LAMTOR3Q9UHA4 124 aa7.3□□□□□ -1.24
TRAIP-209ENST00000488860 OXTP01178 125 aa7.29□□□□□ -1.24
TRAIP-209ENST00000488860 KRTAP13-2Q52LG2 175 aa7.29□□□□□ -1.24
TRAIP-209ENST00000488860 TYMSOSQ8TAI1 123 aa7.29□□□□□ -1.24
TRAIP-209ENST00000488860 F8WEM9 126 aa7.28□□□□□ -1.24
TRAIP-209ENST00000488860 GHRHP01286 108 aa7.28□□□□□ -1.24
TRAIP-209ENST00000488860 PPDPFLQ8WWR9 84 aa7.28□□□□□ -1.24
TRAIP-209ENST00000488860 PCLOQ9Y6V0 5065 aa7.28□□□□□ -1.24
TRAIP-209ENST00000488860 C9JAW5 83 aa7.27□□□□□ -1.25
TRAIP-209ENST00000488860 SMIM29Q86T20 159 aa7.27□□□□□ -1.25
TRAIP-209ENST00000488860 TNXBP22105 4242 aa7.26□□□□□ -1.25
TRAIP-209ENST00000488860 A0A1B0GV72 72 aa7.26□□□□□ -1.25
TRAIP-209ENST00000488860 KRTAP29-1A8MX34 341 aaPredicted RBP7.26□□□□□ -1.25
TRAIP-209ENST00000488860 H3BMG7 143 aa7.26□□□□□ -1.25
TRAIP-209ENST00000488860 J3QL48 77 aa7.26□□□□□ -1.25
TRAIP-209ENST00000488860 K7EP34 96 aa7.26□□□□□ -1.25
TRAIP-209ENST00000488860 MTURNQ8N3F0 131 aa7.26□□□□□ -1.25
TRAIP-209ENST00000488860 Q8NBF4 154 aa7.26□□□□□ -1.25
TRAIP-209ENST00000488860 H3BQ85 93 aa7.25□□□□□ -1.25
TRAIP-209ENST00000488860 TMEM256-PLSCR3K7ERE1 68 aa7.24□□□□□ -1.25
TRAIP-209ENST00000488860 BAALC-AS2P0C853 105 aa7.24□□□□□ -1.25
TRAIP-209ENST00000488860 MT1HL1P0DM35 61 aa7.23□□□□□ -1.25
TRAIP-209ENST00000488860 NDUFV3P56181 108 aaKnown RBP7.23□□□□□ -1.25
TRAIP-209ENST00000488860 KRTAP10-8P60410 259 aa7.23□□□□□ -1.25
TRAIP-209ENST00000488860 GTF2H5Q6ZYL4 71 aa7.22□□□□□ -1.25
TRAIP-209ENST00000488860 UBE2V1Q13404 147 aa7.21□□□□□ -1.26
TRAIP-209ENST00000488860 ANKRD29Q8N6D5 301 aa7.21□□□□□ -1.26
TRAIP-209ENST00000488860 LINC00304Q8N9R0 145 aa7.2□□□□□ -1.26
TRAIP-209ENST00000488860 A0A0G2JQZ4 141 aa7.19□□□□□ -1.26
TRAIP-209ENST00000488860 A0A1B0GV90 55 aa7.19□□□□□ -1.26
TRAIP-209ENST00000488860 H3BT86 120 aa7.19□□□□□ -1.26
TRAIP-209ENST00000488860 SSBP3-AS1Q7Z2R9 100 aa7.19□□□□□ -1.26
TRAIP-209ENST00000488860 C4orf48Q5BLP8 95 aa7.18□□□□□ -1.26
TRAIP-209ENST00000488860 HRCT1Q6UXD1 115 aa7.18□□□□□ -1.26
TRAIP-209ENST00000488860 IGLV8-61A0A075B6I0 122 aa7.17□□□□□ -1.26
TRAIP-209ENST00000488860 IGFL1Q6UW32 110 aa7.17□□□□□ -1.26
TRAIP-209ENST00000488860 Q6JHZ5 121 aa7.16□□□□□ -1.26
TRAIP-209ENST00000488860 SMCPP49901 116 aaPredicted RBP7.14□□□□□ -1.27
TRAIP-209ENST00000488860 RBM3P98179 157 aaKnown RBP7.14□□□□□ -1.27
TRAIP-209ENST00000488860 PRO0461Q9UI25 63 aa7.14□□□□□ -1.27
TRAIP-209ENST00000488860 JMJD7-PLA2G4BH0Y9G9 81 aa7.13□□□□□ -1.27
TRAIP-209ENST00000488860 SPAG11AQ6PDA7 123 aa7.13□□□□□ -1.27
TRAIP-209ENST00000488860 DSCR8Q96T75 97 aa7.13□□□□□ -1.27
TRAIP-209ENST00000488860 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
TRAIP-209ENST00000488860 C14orf132Q9NPU4 83 aa7.11□□□□□ -1.27
TRAIP-209ENST00000488860 DMBT1Q9UGM3 2413 aaPredicted RBP7.1□□□□□ -1.27
TRAIP-209ENST00000488860 F8W1H4 67 aa7.1□□□□□ -1.27
TRAIP-209ENST00000488860 SPINK1P00995 79 aa7.1□□□□□ -1.27
TRAIP-209ENST00000488860 TRBV7-4A0A0J9YYF1 115 aa7.09□□□□□ -1.27
TRAIP-209ENST00000488860 CCKP06307 115 aa7.09□□□□□ -1.27
TRAIP-209ENST00000488860 CD164Q04900 197 aa7.09□□□□□ -1.27
TRAIP-209ENST00000488860 OBSCN-AS1Q96MR7 158 aa7.08□□□□□ -1.28
TRAIP-209ENST00000488860 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
TRAIP-209ENST00000488860 TRBV7-7A0A0K0K1E9 115 aa7.07□□□□□ -1.28
TRAIP-209ENST00000488860 A0A1W2PNM2 257 aa7.07□□□□□ -1.28
TRAIP-209ENST00000488860 TEN1Q86WV5 123 aa7.07□□□□□ -1.28
TRAIP-209ENST00000488860 LOC110117498A0A087WWA1 95 aa7.06□□□□□ -1.28
TRAIP-209ENST00000488860 Q6ZQT0 140 aa7.06□□□□□ -1.28
TRAIP-209ENST00000488860 RPS29P62273 56 aaKnown RBP7.05□□□□□ -1.28
TRAIP-209ENST00000488860 ETDBQ3ZM63 59 aa7.05□□□□□ -1.28
TRAIP-209ENST00000488860 Q6Q795 121 aa7.05□□□□□ -1.28
TRAIP-209ENST00000488860 RETNLBQ9BQ08 111 aa7.05□□□□□ -1.28
TRAIP-209ENST00000488860 A0A087WSZ3 146 aa7.04□□□□□ -1.28
TRAIP-209ENST00000488860 PDE6GP18545 87 aa7.04□□□□□ -1.28
TRAIP-209ENST00000488860 SS18L2Q9UHA2 77 aa7.01□□□□□ -1.29
TRAIP-209ENST00000488860 PRR4Q16378 134 aa6.99□□□□□ -1.29
TRAIP-209ENST00000488860 C21orf62-AS1Q17RA5 79 aa6.99□□□□□ -1.29
TRAIP-209ENST00000488860 HERC1Q15751 4861 aa6.98□□□□□ -1.29
TRAIP-209ENST00000488860 Q5XG85 94 aa6.98□□□□□ -1.29
TRAIP-209ENST00000488860 ASB16-AS1Q495Z4 193 aa6.95□□□□□ -1.3
TRAIP-209ENST00000488860 C1orf195Q5TG92 126 aa6.95□□□□□ -1.3
TRAIP-209ENST00000488860 A0A1B0GW54 56 aa6.93□□□□□ -1.3
TRAIP-209ENST00000488860 FP248Q71RG6 208 aaPredicted RBP6.93□□□□□ -1.3
TRAIP-209ENST00000488860 DEFB116Q30KQ4 102 aa6.92□□□□□ -1.3
TRAIP-209ENST00000488860 SIGMAR1Q99720 223 aa6.92□□□□□ -1.3
TRAIP-209ENST00000488860 IGLV7-46A0A075B6I9 117 aa6.91□□□□□ -1.3
TRAIP-209ENST00000488860 Q96NJ1 140 aa6.91□□□□□ -1.3
TRAIP-209ENST00000488860 NREPQ16612 68 aa6.9□□□□□ -1.3
TRAIP-209ENST00000488860 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
TRAIP-209ENST00000488860 LINC00472Q9H8W2 130 aa6.88□□□□□ -1.31
TRAIP-209ENST00000488860 LINC00846Q9NV44 126 aa6.88□□□□□ -1.31
TRAIP-209ENST00000488860 Q6ZVQ6 151 aa6.87□□□□□ -1.31
TRAIP-209ENST00000488860 HMCN2Q8NDA2 5059 aa6.86□□□□□ -1.31
TRAIP-209ENST00000488860 UBL5Q9BZL1 73 aa6.86□□□□□ -1.31
TRAIP-209ENST00000488860 C9orf92A6NGG3 77 aa6.84□□□□□ -1.31
TRAIP-209ENST00000488860 J3KT08 172 aa6.84□□□□□ -1.31
TRAIP-209ENST00000488860 LPAP08519 4548 aa6.84□□□□□ -1.32
TRAIP-209ENST00000488860 FAM240AA0A1B0GVK7 77 aa6.82□□□□□ -1.32
TRAIP-209ENST00000488860 J3QR89 54 aa6.82□□□□□ -1.32
TRAIP-209ENST00000488860 BPY2O14599 106 aa6.82□□□□□ -1.32
TRAIP-209ENST00000488860 ACYP1P07311 99 aa6.82□□□□□ -1.32
TRAIP-209ENST00000488860 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
TRAIP-209ENST00000488860 KRTAP13-3Q3SY46 172 aa6.81□□□□□ -1.32
TRAIP-209ENST00000488860 IGHV6-1A0A0B4J1U7 121 aa6.8□□□□□ -1.32
TRAIP-209ENST00000488860 CDIP1Q9H305 208 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms