RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 H0Y9P7 68 aa10.42□□□□□ -0.74
MCF2L-229ENST00000488765 LYRM9A8MSI8 78 aa10.41□□□□□ -0.74
MCF2L-229ENST00000488765 A0A087WSZ3 146 aa10.4□□□□□ -0.74
MCF2L-229ENST00000488765 NDUFB1O75438 58 aa10.4□□□□□ -0.74
MCF2L-229ENST00000488765 LIMD2Q9BT23 127 aa10.4□□□□□ -0.74
MCF2L-229ENST00000488765 ATP11AUNQ6ZP68 121 aa10.39□□□□□ -0.75
MCF2L-229ENST00000488765 A6NN06 94 aa10.39□□□□□ -0.75
MCF2L-229ENST00000488765 A0A096LNI7 61 aa10.38□□□□□ -0.75
MCF2L-229ENST00000488765 GVQW2A0A096LPI5 108 aaPredicted RBP10.37□□□□□ -0.75
MCF2L-229ENST00000488765 IGKV2D-24A0A075B6R9 120 aa10.37□□□□□ -0.75
MCF2L-229ENST00000488765 COA5Q86WW8 74 aa10.37□□□□□ -0.75
MCF2L-229ENST00000488765 MOBPQ13875 183 aa10.36□□□□□ -0.75
MCF2L-229ENST00000488765 EGFEM1PQ0D2K5 195 aa10.35□□□□□ -0.75
MCF2L-229ENST00000488765 NDUFS5O43920 106 aa10.35□□□□□ -0.75
MCF2L-229ENST00000488765 PRR34Q9NV39 138 aa10.35□□□□□ -0.75
MCF2L-229ENST00000488765 SPINK7P58062 85 aa10.35□□□□□ -0.75
MCF2L-229ENST00000488765 LELP1Q5T871 98 aa10.35□□□□□ -0.75
MCF2L-229ENST00000488765 ADM2Q7Z4H4 148 aa10.34□□□□□ -0.75
MCF2L-229ENST00000488765 LINC00476Q8WZB0 136 aa10.34□□□□□ -0.75
MCF2L-229ENST00000488765 C15orf56Q8N910 161 aa10.33□□□□□ -0.76
MCF2L-229ENST00000488765 Q6ZRX8 168 aa10.32□□□□□ -0.76
MCF2L-229ENST00000488765 H3BS24 57 aa10.32□□□□□ -0.76
MCF2L-229ENST00000488765 C8orf87E5RJ46 101 aa10.31□□□□□ -0.76
MCF2L-229ENST00000488765 KCNQ1DNQ9H478 68 aa10.3□□□□□ -0.76
MCF2L-229ENST00000488765 TENM2Q9NT68 2774 aa10.3□□□□□ -0.76
MCF2L-229ENST00000488765 CASC2Q6XLA1 102 aa10.3□□□□□ -0.76
MCF2L-229ENST00000488765 STAB2Q8WWQ8 2551 aa10.3□□□□□ -0.76
MCF2L-229ENST00000488765 C7orf65Q6ZTY9 151 aa10.29□□□□□ -0.76
MCF2L-229ENST00000488765 ANK2Q01484 3957 aa10.28□□□□□ -0.76
MCF2L-229ENST00000488765 TNP2Q05952 138 aa10.28□□□□□ -0.76
MCF2L-229ENST00000488765 Q75L30 129 aa10.28□□□□□ -0.76
MCF2L-229ENST00000488765 LOC101927531A0A1B0GV80 90 aa10.28□□□□□ -0.76
MCF2L-229ENST00000488765 PHF5AQ7RTV0 110 aaKnown RBP10.28□□□□□ -0.76
MCF2L-229ENST00000488765 SPRR4Q96PI1 79 aa10.28□□□□□ -0.76
MCF2L-229ENST00000488765 IGFL1Q6UW32 110 aa10.27□□□□□ -0.77
MCF2L-229ENST00000488765 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.77
MCF2L-229ENST00000488765 CDC42SE1Q9NRR8 79 aa10.26□□□□□ -0.77
MCF2L-229ENST00000488765 H0Y9J4 135 aa10.26□□□□□ -0.77
MCF2L-229ENST00000488765 PRLHP81277 87 aa10.26□□□□□ -0.77
MCF2L-229ENST00000488765 DHRS4-AS1Q9P1J3 65 aa10.26□□□□□ -0.77
MCF2L-229ENST00000488765 KRTAP24-1Q3LI83 254 aa10.24□□□□□ -0.77
MCF2L-229ENST00000488765 MDFIQ99750 246 aa10.24□□□□□ -0.77
MCF2L-229ENST00000488765 LINC00313P59037 77 aa10.23□□□□□ -0.77
MCF2L-229ENST00000488765 KRTAP10-11P60412 298 aa10.23□□□□□ -0.77
MCF2L-229ENST00000488765 Q8NAQ8 132 aa10.23□□□□□ -0.77
MCF2L-229ENST00000488765 CNBPP62633 177 aaKnown RBP10.19□□□□□ -0.78
MCF2L-229ENST00000488765 KRTAP26-1Q6PEX3 210 aa10.19□□□□□ -0.78
MCF2L-229ENST00000488765 IGLV1-50A0A075B6I6 118 aa10.18□□□□□ -0.78
MCF2L-229ENST00000488765 CASC10Q5T4H9 136 aa10.18□□□□□ -0.78
MCF2L-229ENST00000488765 KRTAP29-1A8MX34 341 aaPredicted RBP10.17□□□□□ -0.78
MCF2L-229ENST00000488765 KRTAP7-1Q8IUC3 87 aa10.17□□□□□ -0.78
MCF2L-229ENST00000488765 SPANXA2-OT1Q8N9U9 137 aa10.17□□□□□ -0.78
MCF2L-229ENST00000488765 C9orf163Q8N9P6 203 aa10.16□□□□□ -0.78
MCF2L-229ENST00000488765 KRTAP4-16G5E9R7 235 aaPredicted RBP10.16□□□□□ -0.78
MCF2L-229ENST00000488765 PRR26Q8N8Z3 221 aa10.15□□□□□ -0.78
MCF2L-229ENST00000488765 IGKV2-24A0A0C4DH68 120 aa10.14□□□□□ -0.79
MCF2L-229ENST00000488765 A0A1B0GW54 56 aa10.11□□□□□ -0.79
MCF2L-229ENST00000488765 IGLV7-46A0A075B6I9 117 aa10.1□□□□□ -0.79
MCF2L-229ENST00000488765 DEFB131BA0A096LNP1 70 aa10.09□□□□□ -0.79
MCF2L-229ENST00000488765 REG3GQ6UW15 175 aa10.08□□□□□ -0.8
MCF2L-229ENST00000488765 HRES1P13985 223 aa10.07□□□□□ -0.8
MCF2L-229ENST00000488765 LINC01558Q9Y6Z2 57 aa10.06□□□□□ -0.8
MCF2L-229ENST00000488765 SPRR1AP35321 89 aa10.04□□□□□ -0.8
MCF2L-229ENST00000488765 A8MWP4 228 aa10.03□□□□□ -0.8
MCF2L-229ENST00000488765 K7EIL1 84 aa10.03□□□□□ -0.8
MCF2L-229ENST00000488765 IGLV5-37A0A075B6J1 123 aa10.01□□□□□ -0.81
MCF2L-229ENST00000488765 LINC01554Q52M75 96 aa10.01□□□□□ -0.81
MCF2L-229ENST00000488765 H3BPC8 53 aa9.98□□□□□ -0.81
MCF2L-229ENST00000488765 MMP24-AS1A0A0U1RRL7 71 aa9.98□□□□□ -0.81
MCF2L-229ENST00000488765 LYSTQ99698 3801 aa9.98□□□□□ -0.81
MCF2L-229ENST00000488765 IGHV6-1A0A0B4J1U7 121 aa9.97□□□□□ -0.81
MCF2L-229ENST00000488765 LINC00472Q9H8W2 130 aa9.97□□□□□ -0.81
MCF2L-229ENST00000488765 DNAH10Q8IVF4 4471 aa9.94□□□□□ -0.82
MCF2L-229ENST00000488765 PLAC8Q9NZF1 115 aa9.93□□□□□ -0.82
MCF2L-229ENST00000488765 IGLV9-49A0A0B4J1Y8 123 aa9.93□□□□□ -0.82
MCF2L-229ENST00000488765 KRTAP11-1Q8IUC1 163 aa9.93□□□□□ -0.82
MCF2L-229ENST00000488765 CHTF8P0CG12 524 aa9.92□□□□□ -0.82
MCF2L-229ENST00000488765 FLG2Q5D862 2391 aaPredicted RBP9.91□□□□□ -0.82
MCF2L-229ENST00000488765 IGLV8-61A0A075B6I0 122 aa9.9□□□□□ -0.83
MCF2L-229ENST00000488765 A0A087X002 238 aa9.9□□□□□ -0.83
MCF2L-229ENST00000488765 NOTCH2NLQ7Z3S9 236 aa9.9□□□□□ -0.83
MCF2L-229ENST00000488765 CSAG1Q6PB30 78 aa9.89□□□□□ -0.83
MCF2L-229ENST00000488765 RETNLBQ9BQ08 111 aa9.88□□□□□ -0.83
MCF2L-229ENST00000488765 LINC01556Q5JQF7 62 aa9.87□□□□□ -0.83
MCF2L-229ENST00000488765 TGP01266 2768 aa9.86□□□□□ -0.83
MCF2L-229ENST00000488765 TLX1NBP0CAT3 122 aa9.84□□□□□ -0.83
MCF2L-229ENST00000488765 PLA2G2DQ9UNK4 145 aa9.84□□□□□ -0.83
MCF2L-229ENST00000488765 CMYA5Q8N3K9 4069 aa9.84□□□□□ -0.83
MCF2L-229ENST00000488765 SPINK6Q6UWN8 80 aa9.82□□□□□ -0.84
MCF2L-229ENST00000488765 C8orf17Q9NRJ1 99 aa9.81□□□□□ -0.84
MCF2L-229ENST00000488765 Q6ZR54 194 aa9.8□□□□□ -0.84
MCF2L-229ENST00000488765 ANAPC11Q9NYG5 84 aa9.8□□□□□ -0.84
MCF2L-229ENST00000488765 PLA2G1BP04054 148 aaKnown RBP9.79□□□□□ -0.84
MCF2L-229ENST00000488765 UBE2DNLQ8IWF7 75 aa9.79□□□□□ -0.84
MCF2L-229ENST00000488765 Q5W150 140 aa9.78□□□□□ -0.84
MCF2L-229ENST00000488765 A0A1B0GU69 56 aa9.78□□□□□ -0.84
MCF2L-229ENST00000488765 CDK2AP2O75956 126 aa9.75□□□□□ -0.85
MCF2L-229ENST00000488765 TP53AIP1Q9HCN2 124 aa9.74□□□□□ -0.85
MCF2L-229ENST00000488765 HUWE1Q7Z6Z7 4374 aaKnown RBP9.73□□□□□ -0.85
MCF2L-229ENST00000488765 H3BNG1 76 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms