RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 DNAH5Q8TE73 4624 aa12.69□□□□□ -0.38
NECAB3-213ENST00000488489 ETDCA0A1B0GVM5 59 aa12.69□□□□□ -0.38
NECAB3-213ENST00000488489 IGLV5-52A0A0A0MRZ9 124 aa12.67□□□□□ -0.38
NECAB3-213ENST00000488489 PKD1P98161 4303 aa12.66□□□□□ -0.38
NECAB3-213ENST00000488489 TRAV7A0A075B6U4 112 aa12.65□□□□□ -0.38
NECAB3-213ENST00000488489 DNAH8Q96JB1 4490 aa12.64□□□□□ -0.39
NECAB3-213ENST00000488489 EPM2AB3EWF7 344 aa12.64□□□□□ -0.39
NECAB3-213ENST00000488489 C20orf197Q8N268 126 aa12.64□□□□□ -0.39
NECAB3-213ENST00000488489 UBE2BP63146 152 aa12.63□□□□□ -0.39
NECAB3-213ENST00000488489 DHRS4-AS1Q9P1J3 65 aa12.63□□□□□ -0.39
NECAB3-213ENST00000488489 KRTAP10-2P60368 255 aa12.62□□□□□ -0.39
NECAB3-213ENST00000488489 SRRM2Q9UQ35 2752 aaKnown RBP12.62□□□□□ -0.39
NECAB3-213ENST00000488489 ERC2-IT1O76042 136 aa12.61□□□□□ -0.39
NECAB3-213ENST00000488489 PRLHP81277 87 aa12.59□□□□□ -0.39
NECAB3-213ENST00000488489 OXTP01178 125 aa12.58□□□□□ -0.4
NECAB3-213ENST00000488489 ST20-AS1Q8NBB2 130 aa12.58□□□□□ -0.4
NECAB3-213ENST00000488489 DEFB105AQ8NG35 78 aa12.58□□□□□ -0.4
NECAB3-213ENST00000488489 Q8N377 158 aa12.56□□□□□ -0.4
NECAB3-213ENST00000488489 SCXQ7RTU7 201 aa12.55□□□□□ -0.4
NECAB3-213ENST00000488489 KLKP1Q107X0 134 aa12.55□□□□□ -0.4
NECAB3-213ENST00000488489 PLAC8Q9NZF1 115 aa12.54□□□□□ -0.4
NECAB3-213ENST00000488489 FAM236DA0A1B0GTK5 79 aa12.52□□□□□ -0.4
NECAB3-213ENST00000488489 H7BZZ5 65 aa12.52□□□□□ -0.4
NECAB3-213ENST00000488489 FAM236CP0DP71 79 aa12.52□□□□□ -0.4
NECAB3-213ENST00000488489 LCE6AA0A183 80 aa12.52□□□□□ -0.41
NECAB3-213ENST00000488489 IGLV5-48A0A075B6I7 105 aa12.51□□□□□ -0.41
NECAB3-213ENST00000488489 KMT2CQ8NEZ4 4911 aaKnown RBP12.51□□□□□ -0.41
NECAB3-213ENST00000488489 HIGD2AQ9BW72 106 aa12.5□□□□□ -0.41
NECAB3-213ENST00000488489 FAM30AQ9NZY2 134 aa12.5□□□□□ -0.41
NECAB3-213ENST00000488489 H0Y9J4 135 aa12.49□□□□□ -0.41
NECAB3-213ENST00000488489 PKHD1P08F94 4074 aa12.48□□□□□ -0.41
NECAB3-213ENST00000488489 RYR2Q92736 4967 aa12.48□□□□□ -0.41
NECAB3-213ENST00000488489 KRTAP13-1Q8IUC0 172 aa12.46□□□□□ -0.42
NECAB3-213ENST00000488489 UBE2AP49459 152 aa12.45□□□□□ -0.42
NECAB3-213ENST00000488489 SNURFQ9Y675 71 aa12.45□□□□□ -0.42
NECAB3-213ENST00000488489 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
NECAB3-213ENST00000488489 C5orf47Q569G3 176 aa12.44□□□□□ -0.42
NECAB3-213ENST00000488489 IGKV4-1P06312 121 aa12.44□□□□□ -0.42
NECAB3-213ENST00000488489 NREPQ16612 68 aa12.44□□□□□ -0.42
NECAB3-213ENST00000488489 PSORS1C2Q9UIG4 136 aa12.43□□□□□ -0.42
NECAB3-213ENST00000488489 BPY2O14599 106 aa12.42□□□□□ -0.42
NECAB3-213ENST00000488489 SMIM29Q86T20 159 aa12.42□□□□□ -0.42
NECAB3-213ENST00000488489 SERP1Q9Y6X1 66 aa12.42□□□□□ -0.42
NECAB3-213ENST00000488489 Q5XG85 94 aa12.41□□□□□ -0.42
NECAB3-213ENST00000488489 CIRBP-AS1Q8TBR5 109 aa12.41□□□□□ -0.42
NECAB3-213ENST00000488489 NDUFC1O43677 76 aa12.4□□□□□ -0.42
NECAB3-213ENST00000488489 Q6ZSA8 131 aa12.4□□□□□ -0.42
NECAB3-213ENST00000488489 Q8N9L7 120 aa12.4□□□□□ -0.42
NECAB3-213ENST00000488489 F8WEM9 126 aa12.4□□□□□ -0.43
NECAB3-213ENST00000488489 LRP1BQ9NZR2 4599 aa12.39□□□□□ -0.43
NECAB3-213ENST00000488489 A0A1B0GW54 56 aa12.37□□□□□ -0.43
NECAB3-213ENST00000488489 C1orf137Q5JT78 98 aa12.36□□□□□ -0.43
NECAB3-213ENST00000488489 C4orf26Q17RF5 130 aa12.34□□□□□ -0.43
NECAB3-213ENST00000488489 TMEM254Q8TBM7 123 aa12.34□□□□□ -0.43
NECAB3-213ENST00000488489 OCR1Q9BZK8 76 aa12.33□□□□□ -0.44
NECAB3-213ENST00000488489 A0A1W2PNM2 257 aa12.32□□□□□ -0.44
NECAB3-213ENST00000488489 LINC00336Q6ZUF6 198 aa12.32□□□□□ -0.44
NECAB3-213ENST00000488489 SPRR1BP22528 89 aa12.31□□□□□ -0.44
NECAB3-213ENST00000488489 ATP5EP56381 51 aaPredicted RBP12.31□□□□□ -0.44
NECAB3-213ENST00000488489 Q8NBF4 154 aa12.29□□□□□ -0.44
NECAB3-213ENST00000488489 ZNF861PO60384 105 aa12.28□□□□□ -0.44
NECAB3-213ENST00000488489 DYNC1H1Q14204 4646 aaKnown RBP12.28□□□□□ -0.44
NECAB3-213ENST00000488489 HRCT1Q6UXD1 115 aa12.28□□□□□ -0.44
NECAB3-213ENST00000488489 A0A0G2JQZ4 141 aa12.27□□□□□ -0.45
NECAB3-213ENST00000488489 A0A0U1RQV1 116 aa12.26□□□□□ -0.45
NECAB3-213ENST00000488489 VPS13BQ7Z7G8 4022 aa12.26□□□□□ -0.45
NECAB3-213ENST00000488489 A0A1B0GVY2 172 aa12.26□□□□□ -0.45
NECAB3-213ENST00000488489 SPRR4Q96PI1 79 aa12.26□□□□□ -0.45
NECAB3-213ENST00000488489 IGLV7-43P04211 117 aa12.25□□□□□ -0.45
NECAB3-213ENST00000488489 IGLV8-61A0A075B6I0 122 aa12.24□□□□□ -0.45
NECAB3-213ENST00000488489 IGFL1Q6UW32 110 aa12.23□□□□□ -0.45
NECAB3-213ENST00000488489 RYR3Q15413 4870 aa12.22□□□□□ -0.45
NECAB3-213ENST00000488489 SMIM26A0A096LP01 95 aa12.22□□□□□ -0.45
NECAB3-213ENST00000488489 LINC00483Q53H64 154 aa12.19□□□□□ -0.46
NECAB3-213ENST00000488489 ANAPC11Q9NYG5 84 aa12.17□□□□□ -0.46
NECAB3-213ENST00000488489 DSCR10P59022 87 aa12.17□□□□□ -0.46
NECAB3-213ENST00000488489 FP248Q71RG6 208 aaPredicted RBP12.17□□□□□ -0.46
NECAB3-213ENST00000488489 ZNF706Q9Y5V0 76 aaPredicted RBP12.16□□□□□ -0.46
NECAB3-213ENST00000488489 APOBP04114 4563 aaKnown RBP12.14□□□□□ -0.47
NECAB3-213ENST00000488489 IGLV9-49A0A0B4J1Y8 123 aa12.13□□□□□ -0.47
NECAB3-213ENST00000488489 K7EQZ3 153 aa12.12□□□□□ -0.47
NECAB3-213ENST00000488489 A0A087WSZ3 146 aa12.05□□□□□ -0.48
NECAB3-213ENST00000488489 HCG22E2RYF7 251 aa12.04□□□□□ -0.48
NECAB3-213ENST00000488489 FAT1Q14517 4588 aa12.04□□□□□ -0.48
NECAB3-213ENST00000488489 MOBPQ13875 183 aa12.04□□□□□ -0.48
NECAB3-213ENST00000488489 ZCCHC13Q8WW36 166 aaKnown RBP12.04□□□□□ -0.48
NECAB3-213ENST00000488489 FAM229BQ4G0N7 80 aa12.03□□□□□ -0.48
NECAB3-213ENST00000488489 SMR3BP02814 79 aaPredicted RBP12.01□□□□□ -0.49
NECAB3-213ENST00000488489 RPL37AP61513 92 aaKnown RBP11.99□□□□□ -0.49
NECAB3-213ENST00000488489 PRO0628Q9UI54 55 aa11.95□□□□□ -0.5
NECAB3-213ENST00000488489 A0A087X002 238 aa11.95□□□□□ -0.5
NECAB3-213ENST00000488489 DEFB116Q30KQ4 102 aa11.95□□□□□ -0.5
NECAB3-213ENST00000488489 KRTAP1-4P0C5Y4 121 aa11.93□□□□□ -0.5
NECAB3-213ENST00000488489 hDV103S1A0JD37 113 aa11.93□□□□□ -0.5
NECAB3-213ENST00000488489 MPLKIPQ8TAP9 179 aa11.91□□□□□ -0.5
NECAB3-213ENST00000488489 KRTAP13-2Q52LG2 175 aa11.9□□□□□ -0.5
NECAB3-213ENST00000488489 WFDC13Q8IUB5 93 aa11.9□□□□□ -0.5
NECAB3-213ENST00000488489 KRTAP29-1A8MX34 341 aaPredicted RBP11.87□□□□□ -0.51
NECAB3-213ENST00000488489 KRTAP10-4P60372 401 aaPredicted RBP11.87□□□□□ -0.51
NECAB3-213ENST00000488489 LINC00472Q9H8W2 130 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms