RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 Q6ZRN7 208 aaPredicted RBP5.89□□□□□ -1.47
COL12A1-208ENST00000486533 NKAPP1Q8N9T2 125 aa5.89□□□□□ -1.47
COL12A1-208ENST00000486533 RMI2Q96E14 147 aa5.89□□□□□ -1.47
COL12A1-208ENST00000486533 KRTAP4-5Q9BYR2 181 aa5.89□□□□□ -1.47
COL12A1-208ENST00000486533 DNAH5Q8TE73 4624 aa5.89□□□□□ -1.47
COL12A1-208ENST00000486533 HSPG2P98160 4391 aa5.89□□□□□ -1.47
COL12A1-208ENST00000486533 TRBV7-4A0A0J9YYF1 115 aa5.89□□□□□ -1.47
COL12A1-208ENST00000486533 LINC01547P58512 204 aaPredicted RBP5.89□□□□□ -1.47
COL12A1-208ENST00000486533 HAMPP81172 84 aa5.89□□□□□ -1.47
COL12A1-208ENST00000486533 Q6ZVQ6 151 aa5.89□□□□□ -1.47
COL12A1-208ENST00000486533 Q8NDZ9 215 aa5.88□□□□□ -1.47
COL12A1-208ENST00000486533 XAGE1AQ9HD64 81 aa5.88□□□□□ -1.47
COL12A1-208ENST00000486533 NDUFC1O43677 76 aa5.87□□□□□ -1.47
COL12A1-208ENST00000486533 DNAH10OSP0CZ25 163 aa5.87□□□□□ -1.47
COL12A1-208ENST00000486533 FUSP35637 526 aaKnown RBP eCLIP5.87□□□□□ -1.47
COL12A1-208ENST00000486533 SYCNQ0VAF6 134 aa5.87□□□□□ -1.47
COL12A1-208ENST00000486533 HIGD2BQ4VC39 106 aa5.87□□□□□ -1.47
COL12A1-208ENST00000486533 ATP5EP56381 51 aaPredicted RBP5.86□□□□□ -1.47
COL12A1-208ENST00000486533 Q6ZRU5 148 aa5.86□□□□□ -1.47
COL12A1-208ENST00000486533 DHRS4-AS1Q9P1J3 65 aa5.86□□□□□ -1.47
COL12A1-208ENST00000486533 PLA2G2DQ9UNK4 145 aa5.86□□□□□ -1.47
COL12A1-208ENST00000486533 APOBP04114 4563 aaKnown RBP5.86□□□□□ -1.47
COL12A1-208ENST00000486533 IGKV2D-24A0A075B6R9 120 aa5.85□□□□□ -1.47
COL12A1-208ENST00000486533 FAM19A1Q7Z5A9 133 aa5.85□□□□□ -1.47
COL12A1-208ENST00000486533 C15orf56Q8N910 161 aa5.85□□□□□ -1.47
COL12A1-208ENST00000486533 A0A087WTM6 91 aa5.84□□□□□ -1.47
COL12A1-208ENST00000486533 PRYO14603 147 aa5.84□□□□□ -1.47
COL12A1-208ENST00000486533 PSCAO43653 123 aa5.84□□□□□ -1.47
COL12A1-208ENST00000486533 TLX1NBP0CAT3 122 aa5.84□□□□□ -1.47
COL12A1-208ENST00000486533 KRTAP26-1Q6PEX3 210 aa5.84□□□□□ -1.47
COL12A1-208ENST00000486533 Q8N1X5 172 aa5.84□□□□□ -1.47
COL12A1-208ENST00000486533 KCNQ1DNQ9H478 68 aa5.84□□□□□ -1.48
COL12A1-208ENST00000486533 FAM236DA0A1B0GTK5 79 aa5.83□□□□□ -1.48
COL12A1-208ENST00000486533 ERC2-IT1O76042 136 aa5.83□□□□□ -1.48
COL12A1-208ENST00000486533 FAM236CP0DP71 79 aa5.83□□□□□ -1.48
COL12A1-208ENST00000486533 DPH3Q96FX2 82 aa5.83□□□□□ -1.48
COL12A1-208ENST00000486533 IGLV5-37A0A075B6J1 123 aa5.82□□□□□ -1.48
COL12A1-208ENST00000486533 KLKP1Q107X0 134 aa5.82□□□□□ -1.48
COL12A1-208ENST00000486533 NREPQ16612 68 aa5.82□□□□□ -1.48
COL12A1-208ENST00000486533 C20orf197Q8N268 126 aa5.81□□□□□ -1.48
COL12A1-208ENST00000486533 ETDCA0A1B0GVM5 59 aa5.8□□□□□ -1.48
COL12A1-208ENST00000486533 KRTAP10-1P60331 282 aa5.8□□□□□ -1.48
COL12A1-208ENST00000486533 IGLV5-52A0A0A0MRZ9 124 aa5.8□□□□□ -1.48
COL12A1-208ENST00000486533 SERP1Q9Y6X1 66 aa5.8□□□□□ -1.48
COL12A1-208ENST00000486533 EPM2AB3EWF7 344 aa5.79□□□□□ -1.48
COL12A1-208ENST00000486533 Q6ZRP5 223 aa5.79□□□□□ -1.48
COL12A1-208ENST00000486533 FAM19A5Q7Z5A7 132 aaPredicted RBP5.79□□□□□ -1.48
COL12A1-208ENST00000486533 PKIGQ9Y2B9 76 aa5.79□□□□□ -1.48
COL12A1-208ENST00000486533 LRCOL1A6NCL2 159 aa5.78□□□□□ -1.48
COL12A1-208ENST00000486533 BPY2O14599 106 aa5.78□□□□□ -1.48
COL12A1-208ENST00000486533 C5orf47Q569G3 176 aa5.78□□□□□ -1.48
COL12A1-208ENST00000486533 C7orf33Q8WU49 177 aa5.78□□□□□ -1.48
COL12A1-208ENST00000486533 IGLV5-48A0A075B6I7 105 aa5.77□□□□□ -1.49
COL12A1-208ENST00000486533 Q6ZRX8 168 aa5.77□□□□□ -1.49
COL12A1-208ENST00000486533 SRRM2Q9UQ35 2752 aaKnown RBP5.77□□□□□ -1.49
COL12A1-208ENST00000486533 Q5VSD8 79 aa5.76□□□□□ -1.49
COL12A1-208ENST00000486533 FAT1Q14517 4588 aa5.76□□□□□ -1.49
COL12A1-208ENST00000486533 F8WEM9 126 aa5.76□□□□□ -1.49
COL12A1-208ENST00000486533 SMR3BP02814 79 aaPredicted RBP5.76□□□□□ -1.49
COL12A1-208ENST00000486533 SPRR1AP35321 89 aa5.75□□□□□ -1.49
COL12A1-208ENST00000486533 DMBT1Q9UGM3 2413 aaPredicted RBP5.74□□□□□ -1.49
COL12A1-208ENST00000486533 IGLV1-50A0A075B6I6 118 aa5.74□□□□□ -1.49
COL12A1-208ENST00000486533 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.74□□□□□ -1.49
COL12A1-208ENST00000486533 H7BZZ5 65 aa5.74□□□□□ -1.49
COL12A1-208ENST00000486533 CYSTM1Q9H1C7 97 aa5.74□□□□□ -1.49
COL12A1-208ENST00000486533 IGKV4-1P06312 121 aa5.73□□□□□ -1.49
COL12A1-208ENST00000486533 MRPL55Q7Z7F7 128 aaKnown RBP5.73□□□□□ -1.49
COL12A1-208ENST00000486533 Q8N377 158 aa5.73□□□□□ -1.49
COL12A1-208ENST00000486533 C14orf177Q52M58 125 aa5.72□□□□□ -1.49
COL12A1-208ENST00000486533 C1orf137Q5JT78 98 aa5.72□□□□□ -1.49
COL12A1-208ENST00000486533 SERTAD4-AS1Q5TG53 156 aa5.72□□□□□ -1.49
COL12A1-208ENST00000486533 SCXQ7RTU7 201 aa5.72□□□□□ -1.49
COL12A1-208ENST00000486533 Q8NBF4 154 aa5.72□□□□□ -1.49
COL12A1-208ENST00000486533 DEFB105AQ8NG35 78 aa5.72□□□□□ -1.49
COL12A1-208ENST00000486533 RPL37AP8A6NKH3 93 aa5.72□□□□□ -1.49
COL12A1-208ENST00000486533 REG3GQ6UW15 175 aa5.72□□□□□ -1.49
COL12A1-208ENST00000486533 TMEM254Q8TBM7 123 aa5.72□□□□□ -1.49
COL12A1-208ENST00000486533 FAM30AQ9NZY2 134 aa5.72□□□□□ -1.49
COL12A1-208ENST00000486533 FLG2Q5D862 2391 aaPredicted RBP5.71□□□□□ -1.49
COL12A1-208ENST00000486533 MYCBP2O75592 4640 aa5.71□□□□□ -1.49
COL12A1-208ENST00000486533 HERC1Q15751 4861 aa5.71□□□□□ -1.5
COL12A1-208ENST00000486533 SMIM26A0A096LP01 95 aa5.71□□□□□ -1.5
COL12A1-208ENST00000486533 KRTAP4-16G5E9R7 235 aaPredicted RBP5.71□□□□□ -1.5
COL12A1-208ENST00000486533 UBE2BP63146 152 aa5.71□□□□□ -1.5
COL12A1-208ENST00000486533 SPRR4Q96PI1 79 aa5.7□□□□□ -1.5
COL12A1-208ENST00000486533 SNURFQ9Y675 71 aa5.69□□□□□ -1.5
COL12A1-208ENST00000486533 OCR1Q9BZK8 76 aa5.68□□□□□ -1.5
COL12A1-208ENST00000486533 Q6ZSA8 131 aa5.67□□□□□ -1.5
COL12A1-208ENST00000486533 Q9BRP9 147 aa5.67□□□□□ -1.5
COL12A1-208ENST00000486533 A0A0U1RQV1 116 aa5.66□□□□□ -1.5
COL12A1-208ENST00000486533 PLA2G1BP04054 148 aaKnown RBP5.66□□□□□ -1.5
COL12A1-208ENST00000486533 CNBPP62633 177 aaKnown RBP5.66□□□□□ -1.5
COL12A1-208ENST00000486533 A0A1W2PNM2 257 aa5.65□□□□□ -1.5
COL12A1-208ENST00000486533 VPS13BQ7Z7G8 4022 aa5.65□□□□□ -1.51
COL12A1-208ENST00000486533 IGLV8-61A0A075B6I0 122 aa5.64□□□□□ -1.51
COL12A1-208ENST00000486533 NDUFB1O75438 58 aa5.63□□□□□ -1.51
COL12A1-208ENST00000486533 OXTP01178 125 aa5.63□□□□□ -1.51
COL12A1-208ENST00000486533 DNAH8Q96JB1 4490 aa5.63□□□□□ -1.51
COL12A1-208ENST00000486533 FAM168BA1KXE4 195 aa5.63□□□□□ -1.51
COL12A1-208ENST00000486533 H0Y9J4 135 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms