RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 MT1BP07438 61 aa7.06□□□□□ -1.28
U2AF1-211ENST00000486519 DSCR10P59022 87 aa7.06□□□□□ -1.28
U2AF1-211ENST00000486519 C18orf32Q8TCD1 76 aa7.06□□□□□ -1.28
U2AF1-211ENST00000486519 J3QQQ9 107 aa7.03□□□□□ -1.28
U2AF1-211ENST00000486519 CBY1Q9Y3M2 126 aa7.03□□□□□ -1.28
U2AF1-211ENST00000486519 S100A6P06703 90 aa7.02□□□□□ -1.29
U2AF1-211ENST00000486519 IFI27L1Q96BM0 104 aa7.02□□□□□ -1.29
U2AF1-211ENST00000486519 HIST1H2BKO60814 126 aa7.01□□□□□ -1.29
U2AF1-211ENST00000486519 HIST1H2BJP06899 126 aa7.01□□□□□ -1.29
U2AF1-211ENST00000486519 HIST1H2BOP23527 126 aa7.01□□□□□ -1.29
U2AF1-211ENST00000486519 HIST1H2BBP33778 126 aa7.01□□□□□ -1.29
U2AF1-211ENST00000486519 HIST1H2BDP58876 126 aa7.01□□□□□ -1.29
U2AF1-211ENST00000486519 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
U2AF1-211ENST00000486519 HIST1H2BCP62807 126 aa7.01□□□□□ -1.29
U2AF1-211ENST00000486519 HIST2H2BEQ16778 126 aa7.01□□□□□ -1.29
U2AF1-211ENST00000486519 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.01□□□□□ -1.29
U2AF1-211ENST00000486519 HIST1H2BHQ93079 126 aa7.01□□□□□ -1.29
U2AF1-211ENST00000486519 HIST1H2BNQ99877 126 aa7.01□□□□□ -1.29
U2AF1-211ENST00000486519 HIST1H2BMQ99879 126 aa7.01□□□□□ -1.29
U2AF1-211ENST00000486519 A0A0J9YXY3 114 aa7□□□□□ -1.29
U2AF1-211ENST00000486519 A6NJY4 79 aa7□□□□□ -1.29
U2AF1-211ENST00000486519 LST1O00453 97 aa7□□□□□ -1.29
U2AF1-211ENST00000486519 SPANXDQ9BXN6 97 aa7□□□□□ -1.29
U2AF1-211ENST00000486519 HSBP1O75506 76 aa6.99□□□□□ -1.29
U2AF1-211ENST00000486519 LINC00518Q8N0U6 118 aa6.99□□□□□ -1.29
U2AF1-211ENST00000486519 LINC00308Q8TCZ7 52 aa6.99□□□□□ -1.29
U2AF1-211ENST00000486519 CLEC2BQ92478 149 aa6.99□□□□□ -1.29
U2AF1-211ENST00000486519 CHCHD1Q96BP2 118 aaKnown RBP6.99□□□□□ -1.29
U2AF1-211ENST00000486519 SPANXCQ9NY87 97 aa6.99□□□□□ -1.29
U2AF1-211ENST00000486519 LITAFQ99732 161 aa6.97□□□□□ -1.29
U2AF1-211ENST00000486519 H0Y8G0 127 aa6.96□□□□□ -1.3
U2AF1-211ENST00000486519 SERF1AO75920 110 aa6.96□□□□□ -1.3
U2AF1-211ENST00000486519 SPRR2FQ96RM1 72 aa6.96□□□□□ -1.3
U2AF1-211ENST00000486519 F8WEM9 126 aa6.95□□□□□ -1.3
U2AF1-211ENST00000486519 S100A2P29034 98 aa6.95□□□□□ -1.3
U2AF1-211ENST00000486519 A0A1B0GWB2 263 aa6.94□□□□□ -1.3
U2AF1-211ENST00000486519 NMUP48645 174 aa6.94□□□□□ -1.3
U2AF1-211ENST00000486519 TRBV7-6A0A0J9YX20 115 aa6.93□□□□□ -1.3
U2AF1-211ENST00000486519 COA6Q5JTJ3 125 aaKnown RBP6.93□□□□□ -1.3
U2AF1-211ENST00000486519 LEPROTL1O95214 131 aa6.92□□□□□ -1.3
U2AF1-211ENST00000486519 Q6JHZ5 121 aa6.92□□□□□ -1.3
U2AF1-211ENST00000486519 MTURNQ8N3F0 131 aa6.92□□□□□ -1.3
U2AF1-211ENST00000486519 SNRPEP62304 92 aaKnown RBP6.91□□□□□ -1.3
U2AF1-211ENST00000486519 PMCHL2Q9BQD1 86 aa6.91□□□□□ -1.3
U2AF1-211ENST00000486519 HSPB8Q9UJY1 196 aa6.91□□□□□ -1.3
U2AF1-211ENST00000486519 FABP4P15090 132 aa6.9□□□□□ -1.3
U2AF1-211ENST00000486519 LINC00310P59036 64 aa6.89□□□□□ -1.31
U2AF1-211ENST00000486519 LCE1AQ5T7P2 110 aa6.89□□□□□ -1.31
U2AF1-211ENST00000486519 HIST3H2BBQ8N257 126 aa6.88□□□□□ -1.31
U2AF1-211ENST00000486519 OCIAD2Q56VL3 154 aa6.87□□□□□ -1.31
U2AF1-211ENST00000486519 H3BUT2 72 aa6.85□□□□□ -1.31
U2AF1-211ENST00000486519 KRTDAPP60985 99 aa6.85□□□□□ -1.31
U2AF1-211ENST00000486519 Q5VV11 94 aa6.85□□□□□ -1.31
U2AF1-211ENST00000486519 HIST1H2BLQ99880 126 aa6.85□□□□□ -1.31
U2AF1-211ENST00000486519 TRAV13-2A0A0B4J235 113 aa6.83□□□□□ -1.32
U2AF1-211ENST00000486519 A0A1W2PNM2 257 aa6.83□□□□□ -1.32
U2AF1-211ENST00000486519 GHRHP01286 108 aa6.83□□□□□ -1.32
U2AF1-211ENST00000486519 SPRR2DP22532 72 aa6.83□□□□□ -1.32
U2AF1-211ENST00000486519 SPINK7P58062 85 aa6.83□□□□□ -1.32
U2AF1-211ENST00000486519 HERVK_113P61574 105 aa6.83□□□□□ -1.32
U2AF1-211ENST00000486519 KRTAP19-8Q3LI54 63 aa6.83□□□□□ -1.32
U2AF1-211ENST00000486519 ANKRD39Q53RE8 183 aa6.83□□□□□ -1.32
U2AF1-211ENST00000486519 LINC00313P59037 77 aa6.82□□□□□ -1.32
U2AF1-211ENST00000486519 SYS1-DBNDD2H3BUS1 97 aa6.81□□□□□ -1.32
U2AF1-211ENST00000486519 C3orf79P0CE67 100 aa6.81□□□□□ -1.32
U2AF1-211ENST00000486519 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
U2AF1-211ENST00000486519 Q6ZQY7 126 aa6.81□□□□□ -1.32
U2AF1-211ENST00000486519 PLNP26678 52 aa6.8□□□□□ -1.32
U2AF1-211ENST00000486519 DPM2O94777 84 aa6.79□□□□□ -1.32
U2AF1-211ENST00000486519 WFDC13Q8IUB5 93 aa6.79□□□□□ -1.32
U2AF1-211ENST00000486519 SIGMAR1Q99720 223 aa6.79□□□□□ -1.32
U2AF1-211ENST00000486519 TIMM17BO60830 172 aa6.78□□□□□ -1.32
U2AF1-211ENST00000486519 SCGB1D1O95968 90 aa6.78□□□□□ -1.32
U2AF1-211ENST00000486519 SMIM11BQ8TCY0 68 aa6.78□□□□□ -1.32
U2AF1-211ENST00000486519 NHP2Q9NX24 153 aaKnown RBP6.78□□□□□ -1.32
U2AF1-211ENST00000486519 A4D1N5 150 aa6.77□□□□□ -1.33
U2AF1-211ENST00000486519 A6NDN8 102 aa6.77□□□□□ -1.33
U2AF1-211ENST00000486519 PCP4L1A6NKN8 68 aa6.77□□□□□ -1.33
U2AF1-211ENST00000486519 E9PLD3 99 aa6.77□□□□□ -1.33
U2AF1-211ENST00000486519 IGKCP01834 107 aa6.77□□□□□ -1.33
U2AF1-211ENST00000486519 C12orf57Q99622 126 aa6.77□□□□□ -1.33
U2AF1-211ENST00000486519 TTTY13Q9BZ97 58 aa6.77□□□□□ -1.33
U2AF1-211ENST00000486519 SS18L2Q9UHA2 77 aa6.77□□□□□ -1.33
U2AF1-211ENST00000486519 A0A087WSZ3 146 aa6.76□□□□□ -1.33
U2AF1-211ENST00000486519 LINC01545Q5VT33 79 aa6.76□□□□□ -1.33
U2AF1-211ENST00000486519 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
U2AF1-211ENST00000486519 KRTAP4-6Q9BYQ5 205 aa6.75□□□□□ -1.33
U2AF1-211ENST00000486519 ZNF815PA8K554 130 aa6.74□□□□□ -1.33
U2AF1-211ENST00000486519 HSBP1L1C9JCN9 74 aa6.74□□□□□ -1.33
U2AF1-211ENST00000486519 SMIM6P0DI80 62 aa6.74□□□□□ -1.33
U2AF1-211ENST00000486519 LINC00575Q6W349 94 aa6.74□□□□□ -1.33
U2AF1-211ENST00000486519 FAM218AQ96MZ4 157 aa6.74□□□□□ -1.33
U2AF1-211ENST00000486519 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
U2AF1-211ENST00000486519 ATOH7Q8N100 152 aa6.72□□□□□ -1.33
U2AF1-211ENST00000486519 ZCCHC13Q8WW36 166 aaKnown RBP6.7□□□□□ -1.34
U2AF1-211ENST00000486519 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
U2AF1-211ENST00000486519 VAMP8Q9BV40 100 aa6.69□□□□□ -1.34
U2AF1-211ENST00000486519 hADV29S1A0JD25 119 aa6.68□□□□□ -1.34
U2AF1-211ENST00000486519 IGKV4-1P06312 121 aa6.68□□□□□ -1.34
U2AF1-211ENST00000486519 PYY3Q5JQD4 70 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms