RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 LINC00474Q9P2X8 69 aa5.86□□□□□ -1.47
TMEM39A-208ENST00000486159 JMJD7-PLA2G4BH0Y9G9 81 aa5.85□□□□□ -1.47
TMEM39A-208ENST00000486159 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.85□□□□□ -1.47
TMEM39A-208ENST00000486159 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
TMEM39A-208ENST00000486159 C7orf33Q8WU49 177 aa5.85□□□□□ -1.47
TMEM39A-208ENST00000486159 OBSCN-AS1Q96MR7 158 aa5.85□□□□□ -1.47
TMEM39A-208ENST00000486159 IGKV2-24A0A0C4DH68 120 aa5.84□□□□□ -1.47
TMEM39A-208ENST00000486159 C21orf62-AS1Q17RA5 79 aa5.84□□□□□ -1.47
TMEM39A-208ENST00000486159 IGLV1-50A0A075B6I6 118 aa5.83□□□□□ -1.48
TMEM39A-208ENST00000486159 MRPL55Q7Z7F7 128 aaKnown RBP5.83□□□□□ -1.48
TMEM39A-208ENST00000486159 PLAC8Q9NZF1 115 aa5.83□□□□□ -1.48
TMEM39A-208ENST00000486159 C22orf24Q9Y442 160 aa5.83□□□□□ -1.48
TMEM39A-208ENST00000486159 A0A096LNI7 61 aa5.82□□□□□ -1.48
TMEM39A-208ENST00000486159 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
TMEM39A-208ENST00000486159 SPRR1AP35321 89 aa5.82□□□□□ -1.48
TMEM39A-208ENST00000486159 LRP2P98164 4655 aa5.82□□□□□ -1.48
TMEM39A-208ENST00000486159 DHRS4-AS1Q9P1J3 65 aa5.82□□□□□ -1.48
TMEM39A-208ENST00000486159 SIGMAR1Q99720 223 aa5.81□□□□□ -1.48
TMEM39A-208ENST00000486159 PDE6GP18545 87 aa5.8□□□□□ -1.48
TMEM39A-208ENST00000486159 FSIP2Q5CZC0 6907 aa5.79□□□□□ -1.48
TMEM39A-208ENST00000486159 ETDCA0A1B0GVM5 59 aa5.79□□□□□ -1.48
TMEM39A-208ENST00000486159 KRTAP4-16G5E9R7 235 aaPredicted RBP5.79□□□□□ -1.48
TMEM39A-208ENST00000486159 Q6ZQY7 126 aa5.79□□□□□ -1.48
TMEM39A-208ENST00000486159 Q6ZRX8 168 aa5.79□□□□□ -1.48
TMEM39A-208ENST00000486159 FAM19A5Q7Z5A7 132 aaPredicted RBP5.79□□□□□ -1.48
TMEM39A-208ENST00000486159 KRTAP7-1Q8IUC3 87 aa5.79□□□□□ -1.48
TMEM39A-208ENST00000486159 FAM168BA1KXE4 195 aa5.78□□□□□ -1.48
TMEM39A-208ENST00000486159 B5MCH6 92 aa5.78□□□□□ -1.48
TMEM39A-208ENST00000486159 REG3GQ6UW15 175 aa5.78□□□□□ -1.48
TMEM39A-208ENST00000486159 SCGB1A1P11684 91 aa5.77□□□□□ -1.49
TMEM39A-208ENST00000486159 RBM3P98179 157 aaKnown RBP5.77□□□□□ -1.49
TMEM39A-208ENST00000486159 LOC110117498A0A087WWA1 95 aa5.76□□□□□ -1.49
TMEM39A-208ENST00000486159 RPL37AP8A6NKH3 93 aa5.76□□□□□ -1.49
TMEM39A-208ENST00000486159 CCKP06307 115 aa5.76□□□□□ -1.49
TMEM39A-208ENST00000486159 LAMTOR3Q9UHA4 124 aa5.76□□□□□ -1.49
TMEM39A-208ENST00000486159 LPAP08519 4548 aa5.76□□□□□ -1.49
TMEM39A-208ENST00000486159 A0A1W2PNN7 141 aa5.75□□□□□ -1.49
TMEM39A-208ENST00000486159 H0Y9J4 135 aa5.75□□□□□ -1.49
TMEM39A-208ENST00000486159 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
TMEM39A-208ENST00000486159 C14orf132Q9NPU4 83 aa5.75□□□□□ -1.49
TMEM39A-208ENST00000486159 GAGE2AQ6NT46 116 aa5.74□□□□□ -1.49
TMEM39A-208ENST00000486159 DSCR8Q96T75 97 aa5.74□□□□□ -1.49
TMEM39A-208ENST00000486159 NDUFV3P56181 108 aaKnown RBP5.73□□□□□ -1.49
TMEM39A-208ENST00000486159 LINC00643Q86TS7 51 aa5.73□□□□□ -1.49
TMEM39A-208ENST00000486159 IGLV5-48A0A075B6I7 105 aa5.72□□□□□ -1.49
TMEM39A-208ENST00000486159 UBE2BP63146 152 aa5.72□□□□□ -1.49
TMEM39A-208ENST00000486159 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
TMEM39A-208ENST00000486159 KRTAP11-1Q8IUC1 163 aa5.72□□□□□ -1.49
TMEM39A-208ENST00000486159 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
TMEM39A-208ENST00000486159 TRBV7-4A0A0J9YYF1 115 aa5.71□□□□□ -1.5
TMEM39A-208ENST00000486159 A0A1B0GW54 56 aa5.71□□□□□ -1.5
TMEM39A-208ENST00000486159 Q6Q795 121 aa5.71□□□□□ -1.5
TMEM39A-208ENST00000486159 SPINK6Q6UWN8 80 aa5.71□□□□□ -1.5
TMEM39A-208ENST00000486159 Q6ZQT0 140 aa5.71□□□□□ -1.5
TMEM39A-208ENST00000486159 PHF5AQ7RTV0 110 aaKnown RBP5.71□□□□□ -1.5
TMEM39A-208ENST00000486159 Q9BRP9 147 aa5.71□□□□□ -1.5
TMEM39A-208ENST00000486159 IMUPQ9GZP8 106 aa5.71□□□□□ -1.5
TMEM39A-208ENST00000486159 PSORS1C2Q9UIG4 136 aa5.7□□□□□ -1.5
TMEM39A-208ENST00000486159 MT-ATP8P03928 68 aa5.69□□□□□ -1.5
TMEM39A-208ENST00000486159 FAM19A1Q7Z5A9 133 aa5.69□□□□□ -1.5
TMEM39A-208ENST00000486159 Q8N377 158 aa5.69□□□□□ -1.5
TMEM39A-208ENST00000486159 TRBV7-7A0A0K0K1E9 115 aa5.68□□□□□ -1.5
TMEM39A-208ENST00000486159 BCE1O60756 84 aa5.68□□□□□ -1.5
TMEM39A-208ENST00000486159 LINC01547P58512 204 aaPredicted RBP5.68□□□□□ -1.5
TMEM39A-208ENST00000486159 ATP5EP2Q5VTU8 51 aa5.68□□□□□ -1.5
TMEM39A-208ENST00000486159 SMCR5Q8TEV8 140 aa5.68□□□□□ -1.5
TMEM39A-208ENST00000486159 Q6JHZ5 121 aa5.67□□□□□ -1.5
TMEM39A-208ENST00000486159 UBL5Q9BZL1 73 aa5.67□□□□□ -1.5
TMEM39A-208ENST00000486159 UBE2AP49459 152 aa5.66□□□□□ -1.5
TMEM39A-208ENST00000486159 C1orf137Q5JT78 98 aa5.66□□□□□ -1.5
TMEM39A-208ENST00000486159 DEFB105AQ8NG35 78 aa5.66□□□□□ -1.5
TMEM39A-208ENST00000486159 LINC00846Q9NV44 126 aa5.66□□□□□ -1.5
TMEM39A-208ENST00000486159 F8WEM9 126 aa5.65□□□□□ -1.5
TMEM39A-208ENST00000486159 SPRR1BP22528 89 aa5.65□□□□□ -1.5
TMEM39A-208ENST00000486159 PCP4P48539 62 aa5.65□□□□□ -1.5
TMEM39A-208ENST00000486159 PRR26Q8N8Z3 221 aa5.65□□□□□ -1.5
TMEM39A-208ENST00000486159 A0A1B0GV72 72 aa5.64□□□□□ -1.51
TMEM39A-208ENST00000486159 ERC2-IT1O76042 136 aa5.64□□□□□ -1.51
TMEM39A-208ENST00000486159 IGLV8-61A0A075B6I0 122 aa5.63□□□□□ -1.51
TMEM39A-208ENST00000486159 PRLHP81277 87 aa5.63□□□□□ -1.51
TMEM39A-208ENST00000486159 KRTAP13-1Q8IUC0 172 aa5.63□□□□□ -1.51
TMEM39A-208ENST00000486159 ST20-AS1Q8NBB2 130 aa5.63□□□□□ -1.51
TMEM39A-208ENST00000486159 HIGD2AQ9BW72 106 aa5.63□□□□□ -1.51
TMEM39A-208ENST00000486159 IGLV7-43P04211 117 aa5.62□□□□□ -1.51
TMEM39A-208ENST00000486159 ZNF706Q9Y5V0 76 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-208ENST00000486159 SMIM29Q86T20 159 aa5.61□□□□□ -1.51
TMEM39A-208ENST00000486159 KRTAP1-4P0C5Y4 121 aa5.6□□□□□ -1.51
TMEM39A-208ENST00000486159 CXCL6P80162 114 aa5.6□□□□□ -1.51
TMEM39A-208ENST00000486159 Q6ZVQ6 151 aa5.59□□□□□ -1.51
TMEM39A-208ENST00000486159 Q8NBF4 154 aa5.59□□□□□ -1.51
TMEM39A-208ENST00000486159 SPRR4Q96PI1 79 aa5.59□□□□□ -1.51
TMEM39A-208ENST00000486159 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
TMEM39A-208ENST00000486159 ZNF861PO60384 105 aa5.58□□□□□ -1.52
TMEM39A-208ENST00000486159 CRYGAP11844 174 aa5.57□□□□□ -1.52
TMEM39A-208ENST00000486159 LINC00483Q53H64 154 aa5.57□□□□□ -1.52
TMEM39A-208ENST00000486159 NREPQ16612 68 aa5.56□□□□□ -1.52
TMEM39A-208ENST00000486159 C3orf22Q8N5N4 141 aa5.56□□□□□ -1.52
TMEM39A-208ENST00000486159 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
TMEM39A-208ENST00000486159 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
TMEM39A-208ENST00000486159 IGKV3D-7A0A0C4DH55 119 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms