RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 LINC01545Q5VT33 79 aa9.59□□□□□ -0.87
CHRD-216ENST00000486066 MPLKIPQ8TAP9 179 aa9.59□□□□□ -0.87
CHRD-216ENST00000486066 F8WEM9 126 aa9.58□□□□□ -0.88
CHRD-216ENST00000486066 A6NDN8 102 aa9.57□□□□□ -0.88
CHRD-216ENST00000486066 KRTAP16-1A8MUX0 517 aa9.57□□□□□ -0.88
CHRD-216ENST00000486066 SMIM11BQ8TCY0 68 aa9.57□□□□□ -0.88
CHRD-216ENST00000486066 IFITM1P13164 125 aa9.55□□□□□ -0.88
CHRD-216ENST00000486066 KRTAP6-3Q3LI67 103 aa9.53□□□□□ -0.88
CHRD-216ENST00000486066 OCIAD2Q56VL3 154 aa9.53□□□□□ -0.88
CHRD-216ENST00000486066 LINC00575Q6W349 94 aa9.53□□□□□ -0.88
CHRD-216ENST00000486066 TRAV13-2A0A0B4J235 113 aa9.52□□□□□ -0.89
CHRD-216ENST00000486066 LST1O00453 97 aa9.51□□□□□ -0.89
CHRD-216ENST00000486066 Q6ZQY7 126 aa9.51□□□□□ -0.89
CHRD-216ENST00000486066 Q6ZVH6 145 aa9.5□□□□□ -0.89
CHRD-216ENST00000486066 MUSTN1Q8IVN3 82 aa9.5□□□□□ -0.89
CHRD-216ENST00000486066 COPS9Q8WXC6 57 aa9.5□□□□□ -0.89
CHRD-216ENST00000486066 HRES1P13985 223 aa9.49□□□□□ -0.89
CHRD-216ENST00000486066 PET117Q6UWS5 81 aa9.49□□□□□ -0.89
CHRD-216ENST00000486066 LINC00846Q9NV44 126 aa9.48□□□□□ -0.89
CHRD-216ENST00000486066 NEBP20929 6669 aa9.48□□□□□ -0.89
CHRD-216ENST00000486066 SCGB1D4Q6XE38 83 aa9.47□□□□□ -0.89
CHRD-216ENST00000486066 hADV29S1A0JD25 119 aa9.44□□□□□ -0.9
CHRD-216ENST00000486066 SLC7A5P1Q8MH63 180 aa9.44□□□□□ -0.9
CHRD-216ENST00000486066 FAM236DA0A1B0GTK5 79 aa9.43□□□□□ -0.9
CHRD-216ENST00000486066 COLCA2A8K830 154 aa9.43□□□□□ -0.9
CHRD-216ENST00000486066 FAM236CP0DP71 79 aa9.43□□□□□ -0.9
CHRD-216ENST00000486066 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
CHRD-216ENST00000486066 MUC12Q9UKN1 5478 aa9.42□□□□□ -0.9
CHRD-216ENST00000486066 PPDPFLQ8WWR9 84 aa9.41□□□□□ -0.9
CHRD-216ENST00000486066 H3BUT2 72 aa9.4□□□□□ -0.9
CHRD-216ENST00000486066 C3orf79P0CE67 100 aa9.4□□□□□ -0.9
CHRD-216ENST00000486066 VAMP3Q15836 100 aa9.4□□□□□ -0.9
CHRD-216ENST00000486066 SS18L2Q9UHA2 77 aa9.4□□□□□ -0.9
CHRD-216ENST00000486066 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.39□□□□□ -0.91
CHRD-216ENST00000486066 NOTCH2NLQ7Z3S9 236 aa9.39□□□□□ -0.91
CHRD-216ENST00000486066 DSCR10P59022 87 aa9.38□□□□□ -0.91
CHRD-216ENST00000486066 RBM12B-AS1Q9P1G2 102 aa9.37□□□□□ -0.91
CHRD-216ENST00000486066 HIST1H2BKO60814 126 aa9.36□□□□□ -0.91
CHRD-216ENST00000486066 HIST1H2BJP06899 126 aa9.36□□□□□ -0.91
CHRD-216ENST00000486066 HIST1H2BOP23527 126 aa9.36□□□□□ -0.91
CHRD-216ENST00000486066 HIST1H2BBP33778 126 aa9.36□□□□□ -0.91
CHRD-216ENST00000486066 HIST1H2BDP58876 126 aa9.36□□□□□ -0.91
CHRD-216ENST00000486066 HIST1H2BCP62807 126 aa9.36□□□□□ -0.91
CHRD-216ENST00000486066 HIST2H2BEQ16778 126 aa9.36□□□□□ -0.91
CHRD-216ENST00000486066 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.36□□□□□ -0.91
CHRD-216ENST00000486066 HIST1H2BHQ93079 126 aa9.36□□□□□ -0.91
CHRD-216ENST00000486066 HIST1H2BNQ99877 126 aa9.36□□□□□ -0.91
CHRD-216ENST00000486066 HIST1H2BMQ99879 126 aa9.36□□□□□ -0.91
CHRD-216ENST00000486066 SCGB1D1O95968 90 aa9.35□□□□□ -0.91
CHRD-216ENST00000486066 TEN1Q86WV5 123 aa9.33□□□□□ -0.92
CHRD-216ENST00000486066 SNHG12Q9BXW3 62 aa9.31□□□□□ -0.92
CHRD-216ENST00000486066 A0A087WSZ3 146 aa9.3□□□□□ -0.92
CHRD-216ENST00000486066 LINC00313P59037 77 aa9.25□□□□□ -0.93
CHRD-216ENST00000486066 KRTDAPP60985 99 aa9.25□□□□□ -0.93
CHRD-216ENST00000486066 ATOH7Q8N100 152 aa9.25□□□□□ -0.93
CHRD-216ENST00000486066 COA6Q5JTJ3 125 aaKnown RBP9.23□□□□□ -0.93
CHRD-216ENST00000486066 BVES-AS1Q5T3Y7 98 aa9.23□□□□□ -0.93
CHRD-216ENST00000486066 SIGMAR1Q99720 223 aa9.2□□□□□ -0.94
CHRD-216ENST00000486066 A8MWP4 228 aa9.19□□□□□ -0.94
CHRD-216ENST00000486066 NDUFV3P56181 108 aaKnown RBP9.19□□□□□ -0.94
CHRD-216ENST00000486066 A0A1W2PNM2 257 aa9.18□□□□□ -0.94
CHRD-216ENST00000486066 Q8N9P0 234 aaPredicted RBP9.16□□□□□ -0.94
CHRD-216ENST00000486066 MTURNQ8N3F0 131 aa9.15□□□□□ -0.94
CHRD-216ENST00000486066 SNRPEP62304 92 aaKnown RBP9.14□□□□□ -0.95
CHRD-216ENST00000486066 IGKV4-1P06312 121 aa9.13□□□□□ -0.95
CHRD-216ENST00000486066 FAM218AQ96MZ4 157 aa9.13□□□□□ -0.95
CHRD-216ENST00000486066 C12orf57Q99622 126 aa9.12□□□□□ -0.95
CHRD-216ENST00000486066 H3BMG7 143 aa9.11□□□□□ -0.95
CHRD-216ENST00000486066 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
CHRD-216ENST00000486066 MDN1Q9NU22 5596 aa9.08□□□□□ -0.96
CHRD-216ENST00000486066 SPINK7P58062 85 aa9.07□□□□□ -0.96
CHRD-216ENST00000486066 TRBV7-4A0A0J9YYF1 115 aa9.06□□□□□ -0.96
CHRD-216ENST00000486066 KRTAP20-1Q3LI63 56 aa9.05□□□□□ -0.96
CHRD-216ENST00000486066 ZCCHC13Q8WW36 166 aaKnown RBP9.05□□□□□ -0.96
CHRD-216ENST00000486066 H0YGX0 51 aa9.04□□□□□ -0.96
CHRD-216ENST00000486066 DEFB116Q30KQ4 102 aa9.04□□□□□ -0.96
CHRD-216ENST00000486066 IGHV6-1A0A0B4J1U7 121 aa9.03□□□□□ -0.96
CHRD-216ENST00000486066 KMT2DO14686 5537 aa9.01□□□□□ -0.97
CHRD-216ENST00000486066 A0A1B0GX51 115 aa8.99□□□□□ -0.97
CHRD-216ENST00000486066 RAB37Q96AX2 223 aa8.99□□□□□ -0.97
CHRD-216ENST00000486066 C8orf87E5RJ46 101 aa8.98□□□□□ -0.97
CHRD-216ENST00000486066 SNCGO76070 127 aa8.98□□□□□ -0.97
CHRD-216ENST00000486066 FABP2P12104 132 aa8.97□□□□□ -0.97
CHRD-216ENST00000486066 HIST1H4GQ99525 98 aa8.97□□□□□ -0.97
CHRD-216ENST00000486066 A0A1B0GVX0 72 aa8.96□□□□□ -0.98
CHRD-216ENST00000486066 WFDC13Q8IUB5 93 aa8.96□□□□□ -0.98
CHRD-216ENST00000486066 GHRHP01286 108 aa8.95□□□□□ -0.98
CHRD-216ENST00000486066 ANKRD29Q8N6D5 301 aa8.94□□□□□ -0.98
CHRD-216ENST00000486066 A0A0B4J2C4 111 aa8.93□□□□□ -0.98
CHRD-216ENST00000486066 HSBP1L1C9JCN9 74 aa8.91□□□□□ -0.98
CHRD-216ENST00000486066 KRTAP5-9P26371 169 aa8.91□□□□□ -0.98
CHRD-216ENST00000486066 CCKP06307 115 aa8.87□□□□□ -0.99
CHRD-216ENST00000486066 COX8AP10176 69 aa8.87□□□□□ -0.99
CHRD-216ENST00000486066 HIST1H2BLQ99880 126 aa8.87□□□□□ -0.99
CHRD-216ENST00000486066 DLEU1O43261 78 aa8.86□□□□□ -0.99
CHRD-216ENST00000486066 A6NN06 94 aa8.85□□□□□ -0.99
CHRD-216ENST00000486066 TRACP01848 142 aa8.85□□□□□ -0.99
CHRD-216ENST00000486066 MT1BP07438 61 aa8.85□□□□□ -0.99
CHRD-216ENST00000486066 HIST3H2BBQ8N257 126 aa8.85□□□□□ -0.99
CHRD-216ENST00000486066 A0A1B0GV72 72 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms