RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 SPRR4Q96PI1 79 aa4.66□□□□□ -1.66
SHROOM3-206ENST00000484236 SS18L2Q9UHA2 77 aa4.66□□□□□ -1.66
SHROOM3-206ENST00000484236 IGLV8-61A0A075B6I0 122 aa4.65□□□□□ -1.67
SHROOM3-206ENST00000484236 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.65□□□□□ -1.67
SHROOM3-206ENST00000484236 TRAV7A0A075B6U4 112 aa4.65□□□□□ -1.67
SHROOM3-206ENST00000484236 ERC2-IT1O76042 136 aa4.65□□□□□ -1.67
SHROOM3-206ENST00000484236 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
SHROOM3-206ENST00000484236 A0A1W2PNM2 257 aa4.64□□□□□ -1.67
SHROOM3-206ENST00000484236 BPY2O14599 106 aa4.64□□□□□ -1.67
SHROOM3-206ENST00000484236 SPRR1BP22528 89 aa4.64□□□□□ -1.67
SHROOM3-206ENST00000484236 SMIM29Q86T20 159 aa4.64□□□□□ -1.67
SHROOM3-206ENST00000484236 EPM2AB3EWF7 344 aa4.63□□□□□ -1.67
SHROOM3-206ENST00000484236 COL7A1Q02388 2944 aa4.63□□□□□ -1.67
SHROOM3-206ENST00000484236 C3orf84H3BNL1 204 aa4.62□□□□□ -1.67
SHROOM3-206ENST00000484236 TMEM258P61165 79 aa4.62□□□□□ -1.67
SHROOM3-206ENST00000484236 PHF5AQ7RTV0 110 aaKnown RBP4.62□□□□□ -1.67
SHROOM3-206ENST00000484236 A0A087WTM6 91 aa4.61□□□□□ -1.67
SHROOM3-206ENST00000484236 IGKV4-1P06312 121 aa4.61□□□□□ -1.67
SHROOM3-206ENST00000484236 CHTF8P0CG12 524 aa4.61□□□□□ -1.67
SHROOM3-206ENST00000484236 PRLHP81277 87 aa4.61□□□□□ -1.67
SHROOM3-206ENST00000484236 SCXQ7RTU7 201 aa4.61□□□□□ -1.67
SHROOM3-206ENST00000484236 LINC00476Q8WZB0 136 aa4.61□□□□□ -1.67
SHROOM3-206ENST00000484236 HIGD2AQ9BW72 106 aa4.61□□□□□ -1.67
SHROOM3-206ENST00000484236 UBE2AP49459 152 aa4.6□□□□□ -1.67
SHROOM3-206ENST00000484236 Q6ZR54 194 aa4.6□□□□□ -1.67
SHROOM3-206ENST00000484236 SPACA4Q8TDM5 124 aa4.6□□□□□ -1.67
SHROOM3-206ENST00000484236 VPS13DQ5THJ4 4388 aa4.59□□□□□ -1.67
SHROOM3-206ENST00000484236 IGFL1Q6UW32 110 aa4.59□□□□□ -1.67
SHROOM3-206ENST00000484236 KLKP1Q107X0 134 aa4.58□□□□□ -1.68
SHROOM3-206ENST00000484236 KRTAP13-1Q8IUC0 172 aa4.58□□□□□ -1.68
SHROOM3-206ENST00000484236 NDUFC1O43677 76 aa4.57□□□□□ -1.68
SHROOM3-206ENST00000484236 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
SHROOM3-206ENST00000484236 KRTAP11-1Q8IUC1 163 aa4.57□□□□□ -1.68
SHROOM3-206ENST00000484236 C20orf197Q8N268 126 aa4.57□□□□□ -1.68
SHROOM3-206ENST00000484236 DPH3Q96FX2 82 aa4.57□□□□□ -1.68
SHROOM3-206ENST00000484236 DNAH10Q8IVF4 4471 aa4.56□□□□□ -1.68
SHROOM3-206ENST00000484236 RTL8CO15255 209 aa4.56□□□□□ -1.68
SHROOM3-206ENST00000484236 RPL37AP61513 92 aaKnown RBP4.56□□□□□ -1.68
SHROOM3-206ENST00000484236 OCR1Q9BZK8 76 aa4.56□□□□□ -1.68
SHROOM3-206ENST00000484236 PLECQ15149 4684 aaKnown RBP4.55□□□□□ -1.68
SHROOM3-206ENST00000484236 PANO1I0J062 215 aa4.55□□□□□ -1.68
SHROOM3-206ENST00000484236 J3KT08 172 aa4.55□□□□□ -1.68
SHROOM3-206ENST00000484236 DSCR10P59022 87 aa4.55□□□□□ -1.68
SHROOM3-206ENST00000484236 C1orf134Q5TEV5 83 aa4.55□□□□□ -1.68
SHROOM3-206ENST00000484236 Q8N9L7 120 aa4.55□□□□□ -1.68
SHROOM3-206ENST00000484236 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
SHROOM3-206ENST00000484236 PLAC8Q9NZF1 115 aa4.55□□□□□ -1.68
SHROOM3-206ENST00000484236 ZNF706Q9Y5V0 76 aaPredicted RBP4.55□□□□□ -1.68
SHROOM3-206ENST00000484236 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.55□□□□□ -1.68
SHROOM3-206ENST00000484236 KRTAP21-3Q3LHN1 58 aa4.54□□□□□ -1.68
SHROOM3-206ENST00000484236 LINC00483Q53H64 154 aa4.54□□□□□ -1.68
SHROOM3-206ENST00000484236 A0A087WSZ3 146 aa4.53□□□□□ -1.68
SHROOM3-206ENST00000484236 IGLV5-52A0A0A0MRZ9 124 aa4.52□□□□□ -1.69
SHROOM3-206ENST00000484236 HCG22E2RYF7 251 aa4.52□□□□□ -1.69
SHROOM3-206ENST00000484236 H7BZZ5 65 aa4.52□□□□□ -1.69
SHROOM3-206ENST00000484236 ATP5EP56381 51 aaPredicted RBP4.52□□□□□ -1.69
SHROOM3-206ENST00000484236 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
SHROOM3-206ENST00000484236 TMEM254Q8TBM7 123 aa4.52□□□□□ -1.69
SHROOM3-206ENST00000484236 TENM2Q9NT68 2774 aa4.51□□□□□ -1.69
SHROOM3-206ENST00000484236 CSMD3Q7Z407 3707 aa4.51□□□□□ -1.69
SHROOM3-206ENST00000484236 LCE6AA0A183 80 aa4.51□□□□□ -1.69
SHROOM3-206ENST00000484236 FAM236DA0A1B0GTK5 79 aa4.51□□□□□ -1.69
SHROOM3-206ENST00000484236 K7EQZ3 153 aa4.51□□□□□ -1.69
SHROOM3-206ENST00000484236 FAM236CP0DP71 79 aa4.51□□□□□ -1.69
SHROOM3-206ENST00000484236 DNAH7Q8WXX0 4024 aa4.51□□□□□ -1.69
SHROOM3-206ENST00000484236 DNAH17Q9UFH2 4485 aa4.5□□□□□ -1.69
SHROOM3-206ENST00000484236 A0A0U1RQV1 116 aa4.5□□□□□ -1.69
SHROOM3-206ENST00000484236 ZNF861PO60384 105 aa4.5□□□□□ -1.69
SHROOM3-206ENST00000484236 WWC2-AS2Q96NR7 200 aa4.5□□□□□ -1.69
SHROOM3-206ENST00000484236 LINC00472Q9H8W2 130 aa4.5□□□□□ -1.69
SHROOM3-206ENST00000484236 PSORS1C2Q9UIG4 136 aa4.5□□□□□ -1.69
SHROOM3-206ENST00000484236 PRKDCP78527 4128 aaKnown RBP4.49□□□□□ -1.69
SHROOM3-206ENST00000484236 A0A0G2JQZ4 141 aa4.49□□□□□ -1.69
SHROOM3-206ENST00000484236 A8MWP4 228 aa4.49□□□□□ -1.69
SHROOM3-206ENST00000484236 LY6G6CO95867 125 aa4.49□□□□□ -1.69
SHROOM3-206ENST00000484236 C5orf47Q569G3 176 aa4.49□□□□□ -1.69
SHROOM3-206ENST00000484236 SNURFQ9Y675 71 aa4.49□□□□□ -1.69
SHROOM3-206ENST00000484236 PRR15Q8IV56 129 aa4.48□□□□□ -1.69
SHROOM3-206ENST00000484236 LYSTQ99698 3801 aa4.48□□□□□ -1.69
SHROOM3-206ENST00000484236 STARD9Q9P2P6 4700 aa4.48□□□□□ -1.69
SHROOM3-206ENST00000484236 FAM30AQ9NZY2 134 aa4.47□□□□□ -1.69
SHROOM3-206ENST00000484236 SERP1Q9Y6X1 66 aa4.47□□□□□ -1.69
SHROOM3-206ENST00000484236 DNAH6Q9C0G6 4158 aa4.47□□□□□ -1.69
SHROOM3-206ENST00000484236 KRTAP29-1A8MX34 341 aaPredicted RBP4.46□□□□□ -1.7
SHROOM3-206ENST00000484236 NDUFB1O75438 58 aa4.46□□□□□ -1.7
SHROOM3-206ENST00000484236 MEGF8Q7Z7M0 2845 aa4.46□□□□□ -1.7
SHROOM3-206ENST00000484236 DNAH2Q9P225 4427 aa4.45□□□□□ -1.7
SHROOM3-206ENST00000484236 IGLV9-49A0A0B4J1Y8 123 aa4.45□□□□□ -1.7
SHROOM3-206ENST00000484236 IGLV7-43P04211 117 aa4.45□□□□□ -1.7
SHROOM3-206ENST00000484236 H3BPC8 53 aa4.44□□□□□ -1.7
SHROOM3-206ENST00000484236 DEFB116Q30KQ4 102 aa4.44□□□□□ -1.7
SHROOM3-206ENST00000484236 CASC2Q6XLA1 102 aa4.44□□□□□ -1.7
SHROOM3-206ENST00000484236 ZCCHC13Q8WW36 166 aaKnown RBP4.44□□□□□ -1.7
SHROOM3-206ENST00000484236 MP68P56378 58 aa4.43□□□□□ -1.7
SHROOM3-206ENST00000484236 CD164Q04900 197 aa4.43□□□□□ -1.7
SHROOM3-206ENST00000484236 WFDC13Q8IUB5 93 aa4.43□□□□□ -1.7
SHROOM3-206ENST00000484236 MOBPQ13875 183 aa4.42□□□□□ -1.7
SHROOM3-206ENST00000484236 SSBP3-AS1Q7Z2R9 100 aa4.42□□□□□ -1.7
SHROOM3-206ENST00000484236 Q96NJ1 140 aa4.42□□□□□ -1.7
SHROOM3-206ENST00000484236 OXTP01178 125 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms