RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ETDCA0A1B0GVM5 59 aa3.4□□□□□ -1.87
COL17A1-206ENST00000483876 RPL37AP8A6NKH3 93 aa3.4□□□□□ -1.87
COL17A1-206ENST00000483876 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.87
COL17A1-206ENST00000483876 CCKP06307 115 aa3.4□□□□□ -1.87
COL17A1-206ENST00000483876 IGLV5-48A0A075B6I7 105 aa3.39□□□□□ -1.87
COL17A1-206ENST00000483876 IGKV2-24A0A0C4DH68 120 aa3.39□□□□□ -1.87
COL17A1-206ENST00000483876 A0A1B0GW54 56 aa3.39□□□□□ -1.87
COL17A1-206ENST00000483876 SCGB1A1P11684 91 aa3.39□□□□□ -1.87
COL17A1-206ENST00000483876 NDUFV3P56181 108 aaKnown RBP3.39□□□□□ -1.87
COL17A1-206ENST00000483876 SPACA4Q8TDM5 124 aa3.39□□□□□ -1.87
COL17A1-206ENST00000483876 LAMTOR3Q9UHA4 124 aa3.39□□□□□ -1.87
COL17A1-206ENST00000483876 LINC00643Q86TS7 51 aa3.38□□□□□ -1.87
COL17A1-206ENST00000483876 DPH3Q96FX2 82 aa3.38□□□□□ -1.87
COL17A1-206ENST00000483876 DSCR8Q96T75 97 aa3.38□□□□□ -1.87
COL17A1-206ENST00000483876 Q9BRP9 147 aa3.38□□□□□ -1.87
COL17A1-206ENST00000483876 C14orf132Q9NPU4 83 aa3.38□□□□□ -1.87
COL17A1-206ENST00000483876 PLAC8Q9NZF1 115 aa3.38□□□□□ -1.87
COL17A1-206ENST00000483876 IGLV5-52A0A0A0MRZ9 124 aa3.37□□□□□ -1.87
COL17A1-206ENST00000483876 TRBV7-4A0A0J9YYF1 115 aa3.37□□□□□ -1.87
COL17A1-206ENST00000483876 CHTF8P0CG12 524 aa3.37□□□□□ -1.87
COL17A1-206ENST00000483876 LINC01547P58512 204 aaPredicted RBP3.37□□□□□ -1.87
COL17A1-206ENST00000483876 GAGE2AQ6NT46 116 aa3.37□□□□□ -1.87
COL17A1-206ENST00000483876 Q6ZQT0 140 aa3.37□□□□□ -1.87
COL17A1-206ENST00000483876 Q8N377 158 aa3.37□□□□□ -1.87
COL17A1-206ENST00000483876 KRTAP4-8Q9BYQ9 185 aa3.37□□□□□ -1.87
COL17A1-206ENST00000483876 IMUPQ9GZP8 106 aa3.37□□□□□ -1.87
COL17A1-206ENST00000483876 BCE1O60756 84 aa3.36□□□□□ -1.87
COL17A1-206ENST00000483876 OXTP01178 125 aa3.36□□□□□ -1.87
COL17A1-206ENST00000483876 SPRR1BP22528 89 aa3.36□□□□□ -1.87
COL17A1-206ENST00000483876 KRTAP10-2P60368 255 aa3.36□□□□□ -1.87
COL17A1-206ENST00000483876 UBE2BP63146 152 aa3.36□□□□□ -1.87
COL17A1-206ENST00000483876 Q6Q795 121 aa3.36□□□□□ -1.87
COL17A1-206ENST00000483876 PHF5AQ7RTV0 110 aaKnown RBP3.36□□□□□ -1.87
COL17A1-206ENST00000483876 FAM19A1Q7Z5A9 133 aa3.36□□□□□ -1.87
COL17A1-206ENST00000483876 SMCR5Q8TEV8 140 aa3.36□□□□□ -1.87
COL17A1-206ENST00000483876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.36□□□□□ -1.87
COL17A1-206ENST00000483876 TRBV7-7A0A0K0K1E9 115 aa3.35□□□□□ -1.87
COL17A1-206ENST00000483876 PANO1I0J062 215 aa3.35□□□□□ -1.87
COL17A1-206ENST00000483876 KRTAP13-1Q8IUC0 172 aa3.35□□□□□ -1.87
COL17A1-206ENST00000483876 IGLV8-61A0A075B6I0 122 aa3.34□□□□□ -1.87
COL17A1-206ENST00000483876 A0A0U1RQV1 116 aa3.34□□□□□ -1.87
COL17A1-206ENST00000483876 ERC2-IT1O76042 136 aa3.34□□□□□ -1.87
COL17A1-206ENST00000483876 MT-ATP8P03928 68 aa3.34□□□□□ -1.87
COL17A1-206ENST00000483876 KRTAP11-1Q8IUC1 163 aa3.34□□□□□ -1.87
COL17A1-206ENST00000483876 DEFB105AQ8NG35 78 aa3.34□□□□□ -1.87
COL17A1-206ENST00000483876 LINC00846Q9NV44 126 aa3.34□□□□□ -1.87
COL17A1-206ENST00000483876 LRP1Q07954 4544 aaKnown RBP3.33□□□□□ -1.88
COL17A1-206ENST00000483876 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
COL17A1-206ENST00000483876 UBE2AP49459 152 aa3.33□□□□□ -1.88
COL17A1-206ENST00000483876 ATP5EP2Q5VTU8 51 aa3.33□□□□□ -1.88
COL17A1-206ENST00000483876 Q6JHZ5 121 aa3.33□□□□□ -1.88
COL17A1-206ENST00000483876 Q6ZSA8 131 aa3.33□□□□□ -1.88
COL17A1-206ENST00000483876 SMIM29Q86T20 159 aa3.33□□□□□ -1.88
COL17A1-206ENST00000483876 ST20-AS1Q8NBB2 130 aa3.33□□□□□ -1.88
COL17A1-206ENST00000483876 UBL5Q9BZL1 73 aa3.33□□□□□ -1.88
COL17A1-206ENST00000483876 RPL37AP61513 92 aaKnown RBP3.32□□□□□ -1.88
COL17A1-206ENST00000483876 PRLHP81277 87 aa3.32□□□□□ -1.88
COL17A1-206ENST00000483876 HIGD2AQ9BW72 106 aa3.32□□□□□ -1.88
COL17A1-206ENST00000483876 F8WEM9 126 aa3.31□□□□□ -1.88
COL17A1-206ENST00000483876 ZNF861PO60384 105 aa3.31□□□□□ -1.88
COL17A1-206ENST00000483876 PLA2G1BP04054 148 aaKnown RBP3.31□□□□□ -1.88
COL17A1-206ENST00000483876 FUSP35637 526 aaKnown RBP eCLIP3.31□□□□□ -1.88
COL17A1-206ENST00000483876 PCP4P48539 62 aa3.31□□□□□ -1.88
COL17A1-206ENST00000483876 C1orf137Q5JT78 98 aa3.31□□□□□ -1.88
COL17A1-206ENST00000483876 SPRR4Q96PI1 79 aa3.31□□□□□ -1.88
COL17A1-206ENST00000483876 PSORS1C2Q9UIG4 136 aa3.31□□□□□ -1.88
COL17A1-206ENST00000483876 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
COL17A1-206ENST00000483876 PKHD1L1Q86WI1 4243 aa3.31□□□□□ -1.88
COL17A1-206ENST00000483876 CRYGAP11844 174 aa3.3□□□□□ -1.88
COL17A1-206ENST00000483876 CXCL6P80162 114 aa3.3□□□□□ -1.88
COL17A1-206ENST00000483876 LINC00483Q53H64 154 aa3.3□□□□□ -1.88
COL17A1-206ENST00000483876 A0A1B0GV72 72 aa3.29□□□□□ -1.88
COL17A1-206ENST00000483876 KRTAP10-1P60331 282 aa3.29□□□□□ -1.88
COL17A1-206ENST00000483876 HAMPP81172 84 aa3.29□□□□□ -1.88
COL17A1-206ENST00000483876 Q6ZVQ6 151 aa3.29□□□□□ -1.88
COL17A1-206ENST00000483876 Q8NBF4 154 aa3.29□□□□□ -1.88
COL17A1-206ENST00000483876 CIRBP-AS1Q8TBR5 109 aa3.29□□□□□ -1.88
COL17A1-206ENST00000483876 FAM30AQ9NZY2 134 aa3.29□□□□□ -1.88
COL17A1-206ENST00000483876 A0A1W2PNM2 257 aa3.28□□□□□ -1.88
COL17A1-206ENST00000483876 IGLV7-43P04211 117 aa3.28□□□□□ -1.88
COL17A1-206ENST00000483876 NREPQ16612 68 aa3.28□□□□□ -1.88
COL17A1-206ENST00000483876 C3orf22Q8N5N4 141 aa3.28□□□□□ -1.88
COL17A1-206ENST00000483876 XP32Q5T750 250 aa3.27□□□□□ -1.89
COL17A1-206ENST00000483876 IGFL1Q6UW32 110 aa3.27□□□□□ -1.89
COL17A1-206ENST00000483876 FAT3Q8TDW7 4589 aa3.26□□□□□ -1.89
COL17A1-206ENST00000483876 HIST1H4AP62805 103 aaKnown RBP3.26□□□□□ -1.89
COL17A1-206ENST00000483876 SCXQ7RTU7 201 aa3.26□□□□□ -1.89
COL17A1-206ENST00000483876 IGKV3D-7A0A0C4DH55 119 aa3.25□□□□□ -1.89
COL17A1-206ENST00000483876 BPY2O14599 106 aa3.24□□□□□ -1.89
COL17A1-206ENST00000483876 SSBP3-AS1Q7Z2R9 100 aa3.24□□□□□ -1.89
COL17A1-206ENST00000483876 ATOX1O00244 68 aa3.23□□□□□ -1.89
COL17A1-206ENST00000483876 CD164Q04900 197 aa3.23□□□□□ -1.89
COL17A1-206ENST00000483876 FAM229BQ4G0N7 80 aa3.23□□□□□ -1.89
COL17A1-206ENST00000483876 SMIM20Q8N5G0 67 aa3.23□□□□□ -1.89
COL17A1-206ENST00000483876 ANAPC13Q9BS18 74 aa3.23□□□□□ -1.89
COL17A1-206ENST00000483876 A0A087WSZ3 146 aa3.22□□□□□ -1.89
COL17A1-206ENST00000483876 FAM236AA0A1B0GUQ0 79 aa3.22□□□□□ -1.89
COL17A1-206ENST00000483876 FAM236BA0A1B0GV22 79 aa3.22□□□□□ -1.89
COL17A1-206ENST00000483876 J3KT08 172 aa3.22□□□□□ -1.89
COL17A1-206ENST00000483876 MT1HL1P0DM35 61 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms