RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 TRBV7-6A0A0J9YX20 115 aa6.15□□□□□ -1.42
LIMK1-205ENST00000483414 F8WDY8 70 aa6.15□□□□□ -1.42
LIMK1-205ENST00000483414 ELOF1P60002 83 aaKnown RBP6.15□□□□□ -1.42
LIMK1-205ENST00000483414 PRR4Q16378 134 aa6.15□□□□□ -1.42
LIMK1-205ENST00000483414 ETDCA0A1B0GVM5 59 aa6.15□□□□□ -1.43
LIMK1-205ENST00000483414 BPY2O14599 106 aa6.14□□□□□ -1.43
LIMK1-205ENST00000483414 PSCAO43653 123 aa6.14□□□□□ -1.43
LIMK1-205ENST00000483414 UBE2BP63146 152 aa6.14□□□□□ -1.43
LIMK1-205ENST00000483414 LOC110117498A0A087WWA1 95 aa6.14□□□□□ -1.43
LIMK1-205ENST00000483414 FAM168BA1KXE4 195 aa6.14□□□□□ -1.43
LIMK1-205ENST00000483414 EPM2AB3EWF7 344 aa6.14□□□□□ -1.43
LIMK1-205ENST00000483414 SERTAD4-AS1Q5TG53 156 aa6.14□□□□□ -1.43
LIMK1-205ENST00000483414 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
LIMK1-205ENST00000483414 FUSP35637 526 aaKnown RBP eCLIP6.13□□□□□ -1.43
LIMK1-205ENST00000483414 IGKV2-24A0A0C4DH68 120 aa6.13□□□□□ -1.43
LIMK1-205ENST00000483414 TLX1NBP0CAT3 122 aa6.13□□□□□ -1.43
LIMK1-205ENST00000483414 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
LIMK1-205ENST00000483414 SERP1Q9Y6X1 66 aa6.13□□□□□ -1.43
LIMK1-205ENST00000483414 C9orf163Q8N9P6 203 aa6.12□□□□□ -1.43
LIMK1-205ENST00000483414 TRAV7A0A075B6U4 112 aa6.11□□□□□ -1.43
LIMK1-205ENST00000483414 H3BQ85 93 aa6.11□□□□□ -1.43
LIMK1-205ENST00000483414 Q6ZSA8 131 aa6.11□□□□□ -1.43
LIMK1-205ENST00000483414 KRTAP7-1Q8IUC3 87 aa6.11□□□□□ -1.43
LIMK1-205ENST00000483414 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.11□□□□□ -1.43
LIMK1-205ENST00000483414 C14orf177Q52M58 125 aa6.11□□□□□ -1.43
LIMK1-205ENST00000483414 LINC00528Q8N1L1 170 aa6.11□□□□□ -1.43
LIMK1-205ENST00000483414 BIRC6Q9NR09 4857 aa6.1□□□□□ -1.43
LIMK1-205ENST00000483414 PANO1I0J062 215 aa6.1□□□□□ -1.43
LIMK1-205ENST00000483414 ST20-AS1Q8NBB2 130 aa6.1□□□□□ -1.43
LIMK1-205ENST00000483414 HIGD2AQ9BW72 106 aa6.09□□□□□ -1.43
LIMK1-205ENST00000483414 FAT1Q14517 4588 aa6.09□□□□□ -1.43
LIMK1-205ENST00000483414 TRBV7-4A0A0J9YYF1 115 aa6.09□□□□□ -1.44
LIMK1-205ENST00000483414 KRTAP10-1P60331 282 aa6.07□□□□□ -1.44
LIMK1-205ENST00000483414 CXCL6P80162 114 aa6.07□□□□□ -1.44
LIMK1-205ENST00000483414 FAM30AQ9NZY2 134 aa6.07□□□□□ -1.44
LIMK1-205ENST00000483414 KIAA1109Q2LD37 5005 aa6.07□□□□□ -1.44
LIMK1-205ENST00000483414 SMIM26A0A096LP01 95 aa6.07□□□□□ -1.44
LIMK1-205ENST00000483414 A0A0G2JQZ4 141 aa6.07□□□□□ -1.44
LIMK1-205ENST00000483414 A0A1W2PNN7 141 aa6.07□□□□□ -1.44
LIMK1-205ENST00000483414 TMEM254Q8TBM7 123 aa6.07□□□□□ -1.44
LIMK1-205ENST00000483414 DEFB116Q30KQ4 102 aa6.06□□□□□ -1.44
LIMK1-205ENST00000483414 Q8N377 158 aa6.06□□□□□ -1.44
LIMK1-205ENST00000483414 KLKP1Q107X0 134 aa6.06□□□□□ -1.44
LIMK1-205ENST00000483414 C1orf195Q5TG92 126 aa6.06□□□□□ -1.44
LIMK1-205ENST00000483414 SPACA4Q8TDM5 124 aa6.06□□□□□ -1.44
LIMK1-205ENST00000483414 A0A096LNI7 61 aa6.06□□□□□ -1.44
LIMK1-205ENST00000483414 A8MU10 97 aa6.06□□□□□ -1.44
LIMK1-205ENST00000483414 PSPHP1O15172 72 aa6.06□□□□□ -1.44
LIMK1-205ENST00000483414 C1orf137Q5JT78 98 aa6.06□□□□□ -1.44
LIMK1-205ENST00000483414 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
LIMK1-205ENST00000483414 IGLV5-52A0A0A0MRZ9 124 aa6.05□□□□□ -1.44
LIMK1-205ENST00000483414 C16orf90A8MZG2 172 aa6.05□□□□□ -1.44
LIMK1-205ENST00000483414 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
LIMK1-205ENST00000483414 KCNQ1DNQ9H478 68 aa6.04□□□□□ -1.44
LIMK1-205ENST00000483414 DHRS4-AS1Q9P1J3 65 aa6.04□□□□□ -1.44
LIMK1-205ENST00000483414 MRPL55Q7Z7F7 128 aaKnown RBP6.03□□□□□ -1.44
LIMK1-205ENST00000483414 HERC2O95714 4834 aa6.03□□□□□ -1.44
LIMK1-205ENST00000483414 ERC2-IT1O76042 136 aa6.03□□□□□ -1.44
LIMK1-205ENST00000483414 PRLHP81277 87 aa6.03□□□□□ -1.44
LIMK1-205ENST00000483414 PLA2G2DQ9UNK4 145 aa6.03□□□□□ -1.44
LIMK1-205ENST00000483414 CHTF8P0CG12 524 aa6.02□□□□□ -1.45
LIMK1-205ENST00000483414 Q6ZRX8 168 aa6.02□□□□□ -1.45
LIMK1-205ENST00000483414 SRRM2Q9UQ35 2752 aaKnown RBP6.01□□□□□ -1.45
LIMK1-205ENST00000483414 IGLV5-37A0A075B6J1 123 aa6.01□□□□□ -1.45
LIMK1-205ENST00000483414 Q9BRP9 147 aa6.01□□□□□ -1.45
LIMK1-205ENST00000483414 SEC61GP60059 68 aa6.01□□□□□ -1.45
LIMK1-205ENST00000483414 IGLV1-50A0A075B6I6 118 aa6.01□□□□□ -1.45
LIMK1-205ENST00000483414 PLAC8Q9NZF1 115 aa6□□□□□ -1.45
LIMK1-205ENST00000483414 V9GYY9 64 aa6□□□□□ -1.45
LIMK1-205ENST00000483414 SMIM29Q86T20 159 aa6□□□□□ -1.45
LIMK1-205ENST00000483414 PRYO14603 147 aa6□□□□□ -1.45
LIMK1-205ENST00000483414 IGKV4-1P06312 121 aa6□□□□□ -1.45
LIMK1-205ENST00000483414 REG3GQ6UW15 175 aa6□□□□□ -1.45
LIMK1-205ENST00000483414 A0A1W2PNM2 257 aa5.99□□□□□ -1.45
LIMK1-205ENST00000483414 KRTAP11-1Q8IUC1 163 aa5.99□□□□□ -1.45
LIMK1-205ENST00000483414 WFDC13Q8IUB5 93 aa5.98□□□□□ -1.45
LIMK1-205ENST00000483414 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
LIMK1-205ENST00000483414 CIRBP-AS1Q8TBR5 109 aa5.97□□□□□ -1.45
LIMK1-205ENST00000483414 A0A087WSZ3 146 aa5.96□□□□□ -1.46
LIMK1-205ENST00000483414 BCE1O60756 84 aa5.96□□□□□ -1.46
LIMK1-205ENST00000483414 UBE2AP49459 152 aa5.96□□□□□ -1.46
LIMK1-205ENST00000483414 Q8NBF4 154 aa5.95□□□□□ -1.46
LIMK1-205ENST00000483414 TNXBP22105 4242 aa5.95□□□□□ -1.46
LIMK1-205ENST00000483414 K7EQZ3 153 aa5.95□□□□□ -1.46
LIMK1-205ENST00000483414 FAT3Q8TDW7 4589 aa5.95□□□□□ -1.46
LIMK1-205ENST00000483414 IGLV5-48A0A075B6I7 105 aa5.94□□□□□ -1.46
LIMK1-205ENST00000483414 CDK2AP2O75956 126 aa5.94□□□□□ -1.46
LIMK1-205ENST00000483414 PHF5AQ7RTV0 110 aaKnown RBP5.94□□□□□ -1.46
LIMK1-205ENST00000483414 OCR1Q9BZK8 76 aa5.94□□□□□ -1.46
LIMK1-205ENST00000483414 NDUFC1O43677 76 aa5.93□□□□□ -1.46
LIMK1-205ENST00000483414 RPL37AP61513 92 aaKnown RBP5.93□□□□□ -1.46
LIMK1-205ENST00000483414 C1orf64Q8NEQ6 169 aa5.93□□□□□ -1.46
LIMK1-205ENST00000483414 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
LIMK1-205ENST00000483414 KRTAP4-16G5E9R7 235 aaPredicted RBP5.92□□□□□ -1.46
LIMK1-205ENST00000483414 A8MUN3 132 aa5.91□□□□□ -1.46
LIMK1-205ENST00000483414 SPRR1AP35321 89 aa5.9□□□□□ -1.46
LIMK1-205ENST00000483414 IGFL1Q6UW32 110 aa5.9□□□□□ -1.46
LIMK1-205ENST00000483414 H0Y9J4 135 aa5.89□□□□□ -1.47
LIMK1-205ENST00000483414 J3QL48 77 aa5.89□□□□□ -1.47
LIMK1-205ENST00000483414 KRTAP13-1Q8IUC0 172 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms