RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 REG3GQ6UW15 175 aa12.81□□□□□ -0.36
RXRB-204ENST00000483281 LINC00528Q8N1L1 170 aa12.81□□□□□ -0.36
RXRB-204ENST00000483281 Q5XG85 94 aa12.8□□□□□ -0.36
RXRB-204ENST00000483281 TMEM256-PLSCR3K7ERE1 68 aa12.79□□□□□ -0.36
RXRB-204ENST00000483281 GHRHP01286 108 aa12.79□□□□□ -0.36
RXRB-204ENST00000483281 BCE1O60756 84 aa12.78□□□□□ -0.36
RXRB-204ENST00000483281 KRTAP4-16G5E9R7 235 aaPredicted RBP12.77□□□□□ -0.37
RXRB-204ENST00000483281 ZNF73O43830 326 aaPredicted RBP12.77□□□□□ -0.37
RXRB-204ENST00000483281 HSPG2P98160 4391 aa12.76□□□□□ -0.37
RXRB-204ENST00000483281 FAM229AH3BQW9 127 aa12.75□□□□□ -0.37
RXRB-204ENST00000483281 RPL37AP61513 92 aaKnown RBP12.75□□□□□ -0.37
RXRB-204ENST00000483281 C1orf137Q5JT78 98 aa12.75□□□□□ -0.37
RXRB-204ENST00000483281 TRBV7-6A0A0J9YX20 115 aa12.74□□□□□ -0.37
RXRB-204ENST00000483281 RYR1P21817 5038 aa12.74□□□□□ -0.37
RXRB-204ENST00000483281 FAM19A1Q7Z5A9 133 aa12.74□□□□□ -0.37
RXRB-204ENST00000483281 DIRC1Q969H9 104 aa12.73□□□□□ -0.37
RXRB-204ENST00000483281 H0Y9J4 135 aa12.72□□□□□ -0.37
RXRB-204ENST00000483281 C6orf99Q4VX62 202 aa12.72□□□□□ -0.37
RXRB-204ENST00000483281 Q8N1X5 172 aa12.72□□□□□ -0.37
RXRB-204ENST00000483281 UBL5Q9BZL1 73 aa12.72□□□□□ -0.37
RXRB-204ENST00000483281 C4orf26Q17RF5 130 aa12.71□□□□□ -0.37
RXRB-204ENST00000483281 VPS13BQ7Z7G8 4022 aa12.71□□□□□ -0.37
RXRB-204ENST00000483281 BIRC6Q9NR09 4857 aa12.71□□□□□ -0.37
RXRB-204ENST00000483281 ETDCA0A1B0GVM5 59 aa12.7□□□□□ -0.38
RXRB-204ENST00000483281 PLA2G1BP04054 148 aaKnown RBP12.7□□□□□ -0.38
RXRB-204ENST00000483281 IGLV7-43P04211 117 aa12.7□□□□□ -0.38
RXRB-204ENST00000483281 KRTAP10-4P60372 401 aaPredicted RBP12.7□□□□□ -0.38
RXRB-204ENST00000483281 KIAA1109Q2LD37 5005 aa12.7□□□□□ -0.38
RXRB-204ENST00000483281 KRTAP13-1Q8IUC0 172 aa12.69□□□□□ -0.38
RXRB-204ENST00000483281 LOC110117498A0A087WWA1 95 aa12.68□□□□□ -0.38
RXRB-204ENST00000483281 TRAV7A0A075B6U4 112 aa12.67□□□□□ -0.38
RXRB-204ENST00000483281 Q6ZQT0 140 aa12.67□□□□□ -0.38
RXRB-204ENST00000483281 FAM236DA0A1B0GTK5 79 aa12.67□□□□□ -0.38
RXRB-204ENST00000483281 ZNF861PO60384 105 aa12.67□□□□□ -0.38
RXRB-204ENST00000483281 FAM236CP0DP71 79 aa12.67□□□□□ -0.38
RXRB-204ENST00000483281 ELOF1P60002 83 aaKnown RBP12.67□□□□□ -0.38
RXRB-204ENST00000483281 Q5VSD8 79 aa12.67□□□□□ -0.38
RXRB-204ENST00000483281 Q6ZRX8 168 aa12.67□□□□□ -0.38
RXRB-204ENST00000483281 C20orf197Q8N268 126 aa12.67□□□□□ -0.38
RXRB-204ENST00000483281 COX7BP24311 80 aa12.66□□□□□ -0.38
RXRB-204ENST00000483281 UBE2AP49459 152 aa12.66□□□□□ -0.38
RXRB-204ENST00000483281 KRTAP17-1Q9BYP8 105 aa12.66□□□□□ -0.38
RXRB-204ENST00000483281 FAT1Q14517 4588 aa12.66□□□□□ -0.38
RXRB-204ENST00000483281 HRCT1Q6UXD1 115 aa12.65□□□□□ -0.38
RXRB-204ENST00000483281 H7BZZ5 65 aa12.65□□□□□ -0.38
RXRB-204ENST00000483281 LINC00575Q6W349 94 aa12.64□□□□□ -0.39
RXRB-204ENST00000483281 KLKP1Q107X0 134 aa12.63□□□□□ -0.39
RXRB-204ENST00000483281 SERP1Q9Y6X1 66 aa12.63□□□□□ -0.39
RXRB-204ENST00000483281 PRLHP81277 87 aa12.63□□□□□ -0.39
RXRB-204ENST00000483281 RBM3P98179 157 aaKnown RBP12.61□□□□□ -0.39
RXRB-204ENST00000483281 Q9BRP9 147 aa12.6□□□□□ -0.39
RXRB-204ENST00000483281 DHRS4-AS1Q9P1J3 65 aa12.6□□□□□ -0.39
RXRB-204ENST00000483281 SPINK6Q6UWN8 80 aa12.6□□□□□ -0.39
RXRB-204ENST00000483281 LINC01547P58512 204 aaPredicted RBP12.59□□□□□ -0.39
RXRB-204ENST00000483281 SRRM2Q9UQ35 2752 aaKnown RBP12.59□□□□□ -0.39
RXRB-204ENST00000483281 CXCL6P80162 114 aa12.57□□□□□ -0.4
RXRB-204ENST00000483281 H3BQ85 93 aa12.56□□□□□ -0.4
RXRB-204ENST00000483281 PDE6GP18545 87 aa12.56□□□□□ -0.4
RXRB-204ENST00000483281 Q6ZVQ6 151 aa12.56□□□□□ -0.4
RXRB-204ENST00000483281 HIGD2AQ9BW72 106 aa12.56□□□□□ -0.4
RXRB-204ENST00000483281 ERC2-IT1O76042 136 aa12.52□□□□□ -0.41
RXRB-204ENST00000483281 LAMTOR3Q9UHA4 124 aa12.5□□□□□ -0.41
RXRB-204ENST00000483281 NDUFC1O43677 76 aa12.49□□□□□ -0.41
RXRB-204ENST00000483281 ZNF706Q9Y5V0 76 aaPredicted RBP12.47□□□□□ -0.41
RXRB-204ENST00000483281 PKHD1L1Q86WI1 4243 aa12.47□□□□□ -0.41
RXRB-204ENST00000483281 SMIM26A0A096LP01 95 aa12.47□□□□□ -0.41
RXRB-204ENST00000483281 HERC2O95714 4834 aa12.46□□□□□ -0.41
RXRB-204ENST00000483281 TRBV7-4A0A0J9YYF1 115 aa12.46□□□□□ -0.41
RXRB-204ENST00000483281 ATP5EP56381 51 aaPredicted RBP12.45□□□□□ -0.42
RXRB-204ENST00000483281 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.45□□□□□ -0.42
RXRB-204ENST00000483281 Q6ZQY7 126 aa12.45□□□□□ -0.42
RXRB-204ENST00000483281 KRTAP4-5Q9BYR2 181 aa12.45□□□□□ -0.42
RXRB-204ENST00000483281 PRO0628Q9UI54 55 aa12.45□□□□□ -0.42
RXRB-204ENST00000483281 SPRR4Q96PI1 79 aa12.45□□□□□ -0.42
RXRB-204ENST00000483281 F8WEM9 126 aa12.44□□□□□ -0.42
RXRB-204ENST00000483281 SNURFQ9Y675 71 aa12.44□□□□□ -0.42
RXRB-204ENST00000483281 FP248Q71RG6 208 aaPredicted RBP12.43□□□□□ -0.42
RXRB-204ENST00000483281 ST20-AS1Q8NBB2 130 aa12.42□□□□□ -0.42
RXRB-204ENST00000483281 IGLV5-48A0A075B6I7 105 aa12.41□□□□□ -0.42
RXRB-204ENST00000483281 SPRR1BP22528 89 aa12.41□□□□□ -0.42
RXRB-204ENST00000483281 KRTAP1-4P0C5Y4 121 aa12.4□□□□□ -0.42
RXRB-204ENST00000483281 LINC00483Q53H64 154 aa12.4□□□□□ -0.42
RXRB-204ENST00000483281 FAM229BQ4G0N7 80 aa12.37□□□□□ -0.43
RXRB-204ENST00000483281 Q8N377 158 aa12.36□□□□□ -0.43
RXRB-204ENST00000483281 NREPQ16612 68 aa12.35□□□□□ -0.43
RXRB-204ENST00000483281 DEFB105AQ8NG35 78 aa12.35□□□□□ -0.43
RXRB-204ENST00000483281 TMEM254Q8TBM7 123 aa12.32□□□□□ -0.44
RXRB-204ENST00000483281 ANAPC11Q9NYG5 84 aa12.32□□□□□ -0.44
RXRB-204ENST00000483281 BPY2O14599 106 aa12.3□□□□□ -0.44
RXRB-204ENST00000483281 SMIM29Q86T20 159 aa12.29□□□□□ -0.44
RXRB-204ENST00000483281 IGKV4-1P06312 121 aa12.27□□□□□ -0.44
RXRB-204ENST00000483281 OCR1Q9BZK8 76 aa12.27□□□□□ -0.44
RXRB-204ENST00000483281 A0A087X002 238 aa12.27□□□□□ -0.45
RXRB-204ENST00000483281 A0A0U1RQV1 116 aa12.27□□□□□ -0.45
RXRB-204ENST00000483281 FLG2Q5D862 2391 aaPredicted RBP12.26□□□□□ -0.45
RXRB-204ENST00000483281 KRTAP13-2Q52LG2 175 aa12.23□□□□□ -0.45
RXRB-204ENST00000483281 PRR26Q8N8Z3 221 aa12.23□□□□□ -0.45
RXRB-204ENST00000483281 KRTAP10-8P60410 259 aa12.22□□□□□ -0.45
RXRB-204ENST00000483281 KRTAP29-1A8MX34 341 aaPredicted RBP12.21□□□□□ -0.46
RXRB-204ENST00000483281 SSBP3-AS1Q7Z2R9 100 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms