RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 ERC2-IT1O76042 136 aa7.67□□□□□ -1.18
TSPAN1-208ENST00000482928 IGLV7-43P04211 117 aa7.67□□□□□ -1.18
TSPAN1-208ENST00000482928 TEX49A0A1B0GTD5 131 aa7.66□□□□□ -1.18
TSPAN1-208ENST00000482928 A0A1B0GV72 72 aa7.66□□□□□ -1.18
TSPAN1-208ENST00000482928 JMJD7-PLA2G4BH0Y9G9 81 aa7.66□□□□□ -1.18
TSPAN1-208ENST00000482928 ZNF861PO60384 105 aa7.66□□□□□ -1.18
TSPAN1-208ENST00000482928 ST20-AS1Q8NBB2 130 aa7.66□□□□□ -1.18
TSPAN1-208ENST00000482928 FAT4Q6V0I7 4981 aa7.66□□□□□ -1.18
TSPAN1-208ENST00000482928 F8WEM9 126 aa7.65□□□□□ -1.18
TSPAN1-208ENST00000482928 NDUFV3P56181 108 aaKnown RBP7.64□□□□□ -1.19
TSPAN1-208ENST00000482928 RPL37AP61513 92 aaKnown RBP7.64□□□□□ -1.19
TSPAN1-208ENST00000482928 KRTAP13-1Q8IUC0 172 aa7.64□□□□□ -1.19
TSPAN1-208ENST00000482928 VPS13BQ7Z7G8 4022 aa7.63□□□□□ -1.19
TSPAN1-208ENST00000482928 IGLV5-48A0A075B6I7 105 aa7.63□□□□□ -1.19
TSPAN1-208ENST00000482928 GAGE2AQ6NT46 116 aa7.63□□□□□ -1.19
TSPAN1-208ENST00000482928 K7ERU9 68 aa7.62□□□□□ -1.19
TSPAN1-208ENST00000482928 RBM3P98179 157 aaKnown RBP7.62□□□□□ -1.19
TSPAN1-208ENST00000482928 Q8N377 158 aa7.62□□□□□ -1.19
TSPAN1-208ENST00000482928 DSCR8Q96T75 97 aa7.62□□□□□ -1.19
TSPAN1-208ENST00000482928 XGP55808 180 aa7.61□□□□□ -1.19
TSPAN1-208ENST00000482928 SMR3BP02814 79 aaPredicted RBP7.6□□□□□ -1.19
TSPAN1-208ENST00000482928 C14orf132Q9NPU4 83 aa7.6□□□□□ -1.19
TSPAN1-208ENST00000482928 FAT1Q14517 4588 aa7.59□□□□□ -1.19
TSPAN1-208ENST00000482928 LINC01547P58512 204 aaPredicted RBP7.59□□□□□ -1.19
TSPAN1-208ENST00000482928 SPRR4Q96PI1 79 aa7.59□□□□□ -1.19
TSPAN1-208ENST00000482928 PDE6GP18545 87 aa7.58□□□□□ -1.2
TSPAN1-208ENST00000482928 C21orf62-AS1Q17RA5 79 aa7.58□□□□□ -1.2
TSPAN1-208ENST00000482928 KRTAP29-1A8MX34 341 aaPredicted RBP7.57□□□□□ -1.2
TSPAN1-208ENST00000482928 SPRR1BP22528 89 aa7.57□□□□□ -1.2
TSPAN1-208ENST00000482928 C3orf22Q8N5N4 141 aa7.57□□□□□ -1.2
TSPAN1-208ENST00000482928 OBSCN-AS1Q96MR7 158 aa7.57□□□□□ -1.2
TSPAN1-208ENST00000482928 FAM229AH3BQW9 127 aa7.56□□□□□ -1.2
TSPAN1-208ENST00000482928 PLA2G1BP04054 148 aaKnown RBP7.55□□□□□ -1.2
TSPAN1-208ENST00000482928 C9orf153Q5TBE3 101 aa7.55□□□□□ -1.2
TSPAN1-208ENST00000482928 VPS25Q9BRG1 176 aa7.55□□□□□ -1.2
TSPAN1-208ENST00000482928 LOC110117498A0A087WWA1 95 aa7.53□□□□□ -1.2
TSPAN1-208ENST00000482928 IGLV9-49A0A0B4J1Y8 123 aa7.53□□□□□ -1.2
TSPAN1-208ENST00000482928 LINC00483Q53H64 154 aa7.53□□□□□ -1.2
TSPAN1-208ENST00000482928 SPINK6Q6UWN8 80 aa7.53□□□□□ -1.2
TSPAN1-208ENST00000482928 SMIM29Q86T20 159 aa7.53□□□□□ -1.2
TSPAN1-208ENST00000482928 LRP2P98164 4655 aa7.52□□□□□ -1.21
TSPAN1-208ENST00000482928 CCKP06307 115 aa7.52□□□□□ -1.21
TSPAN1-208ENST00000482928 ACYP1P07311 99 aa7.52□□□□□ -1.21
TSPAN1-208ENST00000482928 Q6JHZ5 121 aa7.51□□□□□ -1.21
TSPAN1-208ENST00000482928 TRBV7-4A0A0J9YYF1 115 aa7.5□□□□□ -1.21
TSPAN1-208ENST00000482928 Q6ZQT0 140 aa7.5□□□□□ -1.21
TSPAN1-208ENST00000482928 DNAH8Q96JB1 4490 aa7.49□□□□□ -1.21
TSPAN1-208ENST00000482928 FAM240AA0A1B0GVK7 77 aa7.49□□□□□ -1.21
TSPAN1-208ENST00000482928 Q8NBF4 154 aa7.48□□□□□ -1.21
TSPAN1-208ENST00000482928 ANAPC11Q9NYG5 84 aa7.48□□□□□ -1.21
TSPAN1-208ENST00000482928 CRCT1Q9UGL9 99 aa7.48□□□□□ -1.21
TSPAN1-208ENST00000482928 IGLV8-61A0A075B6I0 122 aa7.47□□□□□ -1.21
TSPAN1-208ENST00000482928 MOBPQ13875 183 aa7.47□□□□□ -1.21
TSPAN1-208ENST00000482928 FAM229BQ4G0N7 80 aa7.47□□□□□ -1.21
TSPAN1-208ENST00000482928 FSIP2Q5CZC0 6907 aa7.46□□□□□ -1.21
TSPAN1-208ENST00000482928 IGFL1Q6UW32 110 aa7.46□□□□□ -1.22
TSPAN1-208ENST00000482928 CRYGAP11844 174 aa7.45□□□□□ -1.22
TSPAN1-208ENST00000482928 A0A1B0GW54 56 aa7.43□□□□□ -1.22
TSPAN1-208ENST00000482928 UBL5Q9BZL1 73 aa7.43□□□□□ -1.22
TSPAN1-208ENST00000482928 SSBP3-AS1Q7Z2R9 100 aa7.41□□□□□ -1.22
TSPAN1-208ENST00000482928 A0A0G2JQZ4 141 aa7.4□□□□□ -1.22
TSPAN1-208ENST00000482928 A0A1W2PNM2 257 aa7.4□□□□□ -1.22
TSPAN1-208ENST00000482928 PKHD1L1Q86WI1 4243 aa7.4□□□□□ -1.22
TSPAN1-208ENST00000482928 KRTAP10-4P60372 401 aaPredicted RBP7.39□□□□□ -1.23
TSPAN1-208ENST00000482928 HRCT1Q6UXD1 115 aa7.39□□□□□ -1.23
TSPAN1-208ENST00000482928 TYMSOSQ8TAI1 123 aa7.39□□□□□ -1.23
TSPAN1-208ENST00000482928 LINC00846Q9NV44 126 aa7.39□□□□□ -1.23
TSPAN1-208ENST00000482928 KRTAP1-4P0C5Y4 121 aa7.38□□□□□ -1.23
TSPAN1-208ENST00000482928 NREPQ16612 68 aa7.38□□□□□ -1.23
TSPAN1-208ENST00000482928 A0A087X002 238 aa7.37□□□□□ -1.23
TSPAN1-208ENST00000482928 C4orf48Q5BLP8 95 aa7.37□□□□□ -1.23
TSPAN1-208ENST00000482928 Q6Q795 121 aa7.37□□□□□ -1.23
TSPAN1-208ENST00000482928 A0A087WSZ3 146 aa7.36□□□□□ -1.23
TSPAN1-208ENST00000482928 LINC00643Q86TS7 51 aa7.36□□□□□ -1.23
TSPAN1-208ENST00000482928 SS18L2Q9UHA2 77 aa7.36□□□□□ -1.23
TSPAN1-208ENST00000482928 TRBV7-7A0A0K0K1E9 115 aa7.35□□□□□ -1.23
TSPAN1-208ENST00000482928 KRTAP13-2Q52LG2 175 aa7.35□□□□□ -1.23
TSPAN1-208ENST00000482928 CDIP1Q9H305 208 aa7.35□□□□□ -1.23
TSPAN1-208ENST00000482928 CD164Q04900 197 aa7.34□□□□□ -1.23
TSPAN1-208ENST00000482928 Q6ZVQ6 151 aa7.34□□□□□ -1.23
TSPAN1-208ENST00000482928 PRR26Q8N8Z3 221 aa7.34□□□□□ -1.23
TSPAN1-208ENST00000482928 LRP1Q07954 4544 aaKnown RBP7.33□□□□□ -1.24
TSPAN1-208ENST00000482928 ATP5EP2Q5VTU8 51 aa7.33□□□□□ -1.24
TSPAN1-208ENST00000482928 SIGMAR1Q99720 223 aa7.31□□□□□ -1.24
TSPAN1-208ENST00000482928 KRTAP9-7A8MTY7 169 aa7.3□□□□□ -1.24
TSPAN1-208ENST00000482928 LIMD2Q9BT23 127 aa7.3□□□□□ -1.24
TSPAN1-208ENST00000482928 IGKV3D-7A0A0C4DH55 119 aa7.29□□□□□ -1.24
TSPAN1-208ENST00000482928 BPY2O14599 106 aa7.29□□□□□ -1.24
TSPAN1-208ENST00000482928 LINC00304Q8N9R0 145 aa7.29□□□□□ -1.24
TSPAN1-208ENST00000482928 OXTP01178 125 aa7.28□□□□□ -1.24
TSPAN1-208ENST00000482928 SPAG11AQ6PDA7 123 aa7.28□□□□□ -1.24
TSPAN1-208ENST00000482928 MT-ATP8P03928 68 aa7.27□□□□□ -1.25
TSPAN1-208ENST00000482928 SPINK1P00995 79 aa7.26□□□□□ -1.25
TSPAN1-208ENST00000482928 CXCL6P80162 114 aa7.26□□□□□ -1.25
TSPAN1-208ENST00000482928 HIST1H4AP62805 103 aaKnown RBP7.25□□□□□ -1.25
TSPAN1-208ENST00000482928 FAT3Q8TDW7 4589 aa7.24□□□□□ -1.25
TSPAN1-208ENST00000482928 A0A0U1RQV1 116 aa7.24□□□□□ -1.25
TSPAN1-208ENST00000482928 J3KT08 172 aa7.24□□□□□ -1.25
TSPAN1-208ENST00000482928 DEFB116Q30KQ4 102 aa7.22□□□□□ -1.25
TSPAN1-208ENST00000482928 IMUPQ9GZP8 106 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms