RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 PRR26Q8N8Z3 221 aa11.88□□□□□ -0.51
TRAPPC12-220ENST00000482645 LINC01547P58512 204 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC12-220ENST00000482645 TNXBP22105 4242 aa11.86□□□□□ -0.51
TRAPPC12-220ENST00000482645 IGLV5-48A0A075B6I7 105 aa11.86□□□□□ -0.51
TRAPPC12-220ENST00000482645 OCIAD2Q56VL3 154 aa11.86□□□□□ -0.51
TRAPPC12-220ENST00000482645 A0A087X002 238 aa11.85□□□□□ -0.51
TRAPPC12-220ENST00000482645 TEX49A0A1B0GTD5 131 aa11.84□□□□□ -0.51
TRAPPC12-220ENST00000482645 CRYGAP11844 174 aa11.83□□□□□ -0.52
TRAPPC12-220ENST00000482645 Q8N377 158 aa11.83□□□□□ -0.52
TRAPPC12-220ENST00000482645 GHRHP01286 108 aa11.81□□□□□ -0.52
TRAPPC12-220ENST00000482645 MT1HL1P0DM35 61 aa11.81□□□□□ -0.52
TRAPPC12-220ENST00000482645 C3orf22Q8N5N4 141 aa11.81□□□□□ -0.52
TRAPPC12-220ENST00000482645 BAALC-AS2P0C853 105 aa11.81□□□□□ -0.52
TRAPPC12-220ENST00000482645 FAM229BQ4G0N7 80 aa11.81□□□□□ -0.52
TRAPPC12-220ENST00000482645 LINC00483Q53H64 154 aa11.81□□□□□ -0.52
TRAPPC12-220ENST00000482645 DMBT1Q9UGM3 2413 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-220ENST00000482645 SPRR1BP22528 89 aa11.8□□□□□ -0.52
TRAPPC12-220ENST00000482645 PCP4P48539 62 aa11.8□□□□□ -0.52
TRAPPC12-220ENST00000482645 PPDPFLQ8WWR9 84 aa11.8□□□□□ -0.52
TRAPPC12-220ENST00000482645 TMEM256-PLSCR3K7ERE1 68 aa11.79□□□□□ -0.52
TRAPPC12-220ENST00000482645 H3BQ85 93 aa11.78□□□□□ -0.52
TRAPPC12-220ENST00000482645 H3BT86 120 aa11.77□□□□□ -0.52
TRAPPC12-220ENST00000482645 KRTAP10-8P60410 259 aa11.77□□□□□ -0.52
TRAPPC12-220ENST00000482645 UBE2V1Q13404 147 aa11.77□□□□□ -0.52
TRAPPC12-220ENST00000482645 A0A1B0GV72 72 aa11.76□□□□□ -0.53
TRAPPC12-220ENST00000482645 KRTAP13-2Q52LG2 175 aa11.76□□□□□ -0.53
TRAPPC12-220ENST00000482645 TYMSOSQ8TAI1 123 aa11.76□□□□□ -0.53
TRAPPC12-220ENST00000482645 PRO0461Q9UI25 63 aa11.76□□□□□ -0.53
TRAPPC12-220ENST00000482645 SMIM29Q86T20 159 aa11.76□□□□□ -0.53
TRAPPC12-220ENST00000482645 ANKRD29Q8N6D5 301 aa11.76□□□□□ -0.53
TRAPPC12-220ENST00000482645 IGLV9-49A0A0B4J1Y8 123 aa11.75□□□□□ -0.53
TRAPPC12-220ENST00000482645 LAMTOR3Q9UHA4 124 aa11.75□□□□□ -0.53
TRAPPC12-220ENST00000482645 SMCPP49901 116 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-220ENST00000482645 F8WEM9 126 aa11.73□□□□□ -0.53
TRAPPC12-220ENST00000482645 NDUFV3P56181 108 aaKnown RBP11.73□□□□□ -0.53
TRAPPC12-220ENST00000482645 C9orf153Q5TBE3 101 aa11.72□□□□□ -0.53
TRAPPC12-220ENST00000482645 F8W1H4 67 aa11.7□□□□□ -0.54
TRAPPC12-220ENST00000482645 MOBPQ13875 183 aa11.7□□□□□ -0.54
TRAPPC12-220ENST00000482645 Q8NBF4 154 aa11.66□□□□□ -0.54
TRAPPC12-220ENST00000482645 HERC1Q15751 4861 aa11.65□□□□□ -0.54
TRAPPC12-220ENST00000482645 LINC00304Q8N9R0 145 aa11.62□□□□□ -0.55
TRAPPC12-220ENST00000482645 JMJD7-PLA2G4BH0Y9G9 81 aa11.61□□□□□ -0.55
TRAPPC12-220ENST00000482645 RBM3P98179 157 aaKnown RBP11.61□□□□□ -0.55
TRAPPC12-220ENST00000482645 IGLV8-61A0A075B6I0 122 aa11.6□□□□□ -0.55
TRAPPC12-220ENST00000482645 ETDBQ3ZM63 59 aa11.6□□□□□ -0.55
TRAPPC12-220ENST00000482645 A0A0G2JQZ4 141 aa11.6□□□□□ -0.55
TRAPPC12-220ENST00000482645 TEN1Q86WV5 123 aa11.6□□□□□ -0.55
TRAPPC12-220ENST00000482645 C14orf132Q9NPU4 83 aa11.6□□□□□ -0.55
TRAPPC12-220ENST00000482645 SSBP3-AS1Q7Z2R9 100 aa11.59□□□□□ -0.55
TRAPPC12-220ENST00000482645 C21orf62-AS1Q17RA5 79 aa11.58□□□□□ -0.56
TRAPPC12-220ENST00000482645 IGFL1Q6UW32 110 aa11.58□□□□□ -0.56
TRAPPC12-220ENST00000482645 OBSCN-AS1Q96MR7 158 aa11.58□□□□□ -0.56
TRAPPC12-220ENST00000482645 DSCR8Q96T75 97 aa11.58□□□□□ -0.56
TRAPPC12-220ENST00000482645 Q6JHZ5 121 aa11.57□□□□□ -0.56
TRAPPC12-220ENST00000482645 C4orf48Q5BLP8 95 aa11.56□□□□□ -0.56
TRAPPC12-220ENST00000482645 TRBV7-4A0A0J9YYF1 115 aa11.55□□□□□ -0.56
TRAPPC12-220ENST00000482645 HRCT1Q6UXD1 115 aa11.52□□□□□ -0.57
TRAPPC12-220ENST00000482645 VPS25Q9BRG1 176 aa11.52□□□□□ -0.57
TRAPPC12-220ENST00000482645 LOC110117498A0A087WWA1 95 aa11.51□□□□□ -0.57
TRAPPC12-220ENST00000482645 SPAG11AQ6PDA7 123 aa11.51□□□□□ -0.57
TRAPPC12-220ENST00000482645 CCKP06307 115 aa11.5□□□□□ -0.57
TRAPPC12-220ENST00000482645 Q6ZQT0 140 aa11.5□□□□□ -0.57
TRAPPC12-220ENST00000482645 A0A1W2PNM2 257 aa11.47□□□□□ -0.57
TRAPPC12-220ENST00000482645 SPINK1P00995 79 aa11.46□□□□□ -0.57
TRAPPC12-220ENST00000482645 PDE6GP18545 87 aa11.46□□□□□ -0.57
TRAPPC12-220ENST00000482645 K7ERU9 68 aa11.42□□□□□ -0.58
TRAPPC12-220ENST00000482645 RETNLBQ9BQ08 111 aa11.42□□□□□ -0.58
TRAPPC12-220ENST00000482645 CD164Q04900 197 aa11.41□□□□□ -0.58
TRAPPC12-220ENST00000482645 Q6Q795 121 aa11.41□□□□□ -0.58
TRAPPC12-220ENST00000482645 TRBV7-7A0A0K0K1E9 115 aa11.4□□□□□ -0.58
TRAPPC12-220ENST00000482645 A0A087WSZ3 146 aa11.39□□□□□ -0.59
TRAPPC12-220ENST00000482645 RPS29P62273 56 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-220ENST00000482645 PRR4Q16378 134 aa11.36□□□□□ -0.59
TRAPPC12-220ENST00000482645 LIMD2Q9BT23 127 aa11.35□□□□□ -0.59
TRAPPC12-220ENST00000482645 HMCN2Q8NDA2 5059 aa11.35□□□□□ -0.59
TRAPPC12-220ENST00000482645 SVIPQ8NHG7 77 aa11.34□□□□□ -0.59
TRAPPC12-220ENST00000482645 SCGB1A1P11684 91 aa11.31□□□□□ -0.6
TRAPPC12-220ENST00000482645 SS18L2Q9UHA2 77 aa11.3□□□□□ -0.6
TRAPPC12-220ENST00000482645 A0A1B0GW54 56 aa11.3□□□□□ -0.6
TRAPPC12-220ENST00000482645 J3QR89 54 aa11.28□□□□□ -0.6
TRAPPC12-220ENST00000482645 FAM240AA0A1B0GVK7 77 aa11.25□□□□□ -0.61
TRAPPC12-220ENST00000482645 Q5XG85 94 aa11.25□□□□□ -0.61
TRAPPC12-220ENST00000482645 LINC00846Q9NV44 126 aa11.25□□□□□ -0.61
TRAPPC12-220ENST00000482645 ACYP1P07311 99 aa11.23□□□□□ -0.61
TRAPPC12-220ENST00000482645 IGLV7-46A0A075B6I9 117 aa11.22□□□□□ -0.61
TRAPPC12-220ENST00000482645 NREPQ16612 68 aa11.21□□□□□ -0.61
TRAPPC12-220ENST00000482645 LPAP08519 4548 aa11.21□□□□□ -0.62
TRAPPC12-220ENST00000482645 ASB16-AS1Q495Z4 193 aa11.2□□□□□ -0.62
TRAPPC12-220ENST00000482645 FP248Q71RG6 208 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC12-220ENST00000482645 UBL5Q9BZL1 73 aa11.2□□□□□ -0.62
TRAPPC12-220ENST00000482645 Q6ZVQ6 151 aa11.19□□□□□ -0.62
TRAPPC12-220ENST00000482645 C1orf195Q5TG92 126 aa11.18□□□□□ -0.62
TRAPPC12-220ENST00000482645 Q96NJ1 140 aa11.18□□□□□ -0.62
TRAPPC12-220ENST00000482645 DEFB116Q30KQ4 102 aa11.17□□□□□ -0.62
TRAPPC12-220ENST00000482645 LINC00472Q9H8W2 130 aa11.15□□□□□ -0.62
TRAPPC12-220ENST00000482645 LRP2P98164 4655 aa11.15□□□□□ -0.63
TRAPPC12-220ENST00000482645 SIGMAR1Q99720 223 aa11.14□□□□□ -0.63
TRAPPC12-220ENST00000482645 IGKV4-1P06312 121 aa11.12□□□□□ -0.63
TRAPPC12-220ENST00000482645 BPY2O14599 106 aa11.09□□□□□ -0.63
TRAPPC12-220ENST00000482645 TPRXLQ17RH7 258 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms