RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 SRRM2Q9UQ35 2752 aaKnown RBP6.48□□□□□ -1.37
LINC00173-203ENST00000480237 TEX49A0A1B0GTD5 131 aa6.47□□□□□ -1.37
LINC00173-203ENST00000480237 A0A1B0GV72 72 aa6.47□□□□□ -1.37
LINC00173-203ENST00000480237 A0A1B0GVY2 172 aa6.47□□□□□ -1.37
LINC00173-203ENST00000480237 CIRBP-AS1Q8TBR5 109 aa6.47□□□□□ -1.37
LINC00173-203ENST00000480237 HIGD2AQ9BW72 106 aa6.47□□□□□ -1.37
LINC00173-203ENST00000480237 HAMPP81172 84 aa6.46□□□□□ -1.38
LINC00173-203ENST00000480237 SMCR5Q8TEV8 140 aa6.46□□□□□ -1.38
LINC00173-203ENST00000480237 PSORS1C2Q9UIG4 136 aa6.46□□□□□ -1.38
LINC00173-203ENST00000480237 H0Y9J4 135 aa6.45□□□□□ -1.38
LINC00173-203ENST00000480237 J3QR89 54 aa6.45□□□□□ -1.38
LINC00173-203ENST00000480237 LCE5AQ5TCM9 118 aa6.45□□□□□ -1.38
LINC00173-203ENST00000480237 DEFB105AQ8NG35 78 aa6.45□□□□□ -1.38
LINC00173-203ENST00000480237 LAMTOR3Q9UHA4 124 aa6.45□□□□□ -1.38
LINC00173-203ENST00000480237 ERC2-IT1O76042 136 aa6.44□□□□□ -1.38
LINC00173-203ENST00000480237 C1orf137Q5JT78 98 aa6.44□□□□□ -1.38
LINC00173-203ENST00000480237 SIGMAR1Q99720 223 aa6.44□□□□□ -1.38
LINC00173-203ENST00000480237 Q8N1X5 172 aa6.44□□□□□ -1.38
LINC00173-203ENST00000480237 ST20-AS1Q8NBB2 130 aa6.44□□□□□ -1.38
LINC00173-203ENST00000480237 JMJD7-PLA2G4BH0Y9G9 81 aa6.43□□□□□ -1.38
LINC00173-203ENST00000480237 KRTAP13-1Q8IUC0 172 aa6.42□□□□□ -1.38
LINC00173-203ENST00000480237 C14orf132Q9NPU4 83 aa6.42□□□□□ -1.38
LINC00173-203ENST00000480237 IGLV5-48A0A075B6I7 105 aa6.41□□□□□ -1.38
LINC00173-203ENST00000480237 Q8N377 158 aa6.41□□□□□ -1.38
LINC00173-203ENST00000480237 DYNC1H1Q14204 4646 aaKnown RBP6.41□□□□□ -1.38
LINC00173-203ENST00000480237 NDUFV3P56181 108 aaKnown RBP6.4□□□□□ -1.38
LINC00173-203ENST00000480237 LINC01547P58512 204 aaPredicted RBP6.4□□□□□ -1.38
LINC00173-203ENST00000480237 OBSCN-AS1Q96MR7 158 aa6.4□□□□□ -1.38
LINC00173-203ENST00000480237 LRP1BQ9NZR2 4599 aa6.4□□□□□ -1.38
LINC00173-203ENST00000480237 RBM3P98179 157 aaKnown RBP6.39□□□□□ -1.39
LINC00173-203ENST00000480237 IGLV7-43P04211 117 aa6.38□□□□□ -1.39
LINC00173-203ENST00000480237 C3orf22Q8N5N4 141 aa6.38□□□□□ -1.39
LINC00173-203ENST00000480237 RYR3Q15413 4870 aa6.38□□□□□ -1.39
LINC00173-203ENST00000480237 F8WEM9 126 aa6.37□□□□□ -1.39
LINC00173-203ENST00000480237 ZNF861PO60384 105 aa6.37□□□□□ -1.39
LINC00173-203ENST00000480237 GAGE2AQ6NT46 116 aa6.37□□□□□ -1.39
LINC00173-203ENST00000480237 DSCR8Q96T75 97 aa6.37□□□□□ -1.39
LINC00173-203ENST00000480237 ZNF706Q9Y5V0 76 aaPredicted RBP6.36□□□□□ -1.39
LINC00173-203ENST00000480237 APOBP04114 4563 aaKnown RBP6.35□□□□□ -1.39
LINC00173-203ENST00000480237 LOC110117498A0A087WWA1 95 aa6.35□□□□□ -1.39
LINC00173-203ENST00000480237 VPS13BQ7Z7G8 4022 aa6.34□□□□□ -1.39
LINC00173-203ENST00000480237 SPRR4Q96PI1 79 aa6.34□□□□□ -1.39
LINC00173-203ENST00000480237 TRBV7-4A0A0J9YYF1 115 aa6.33□□□□□ -1.4
LINC00173-203ENST00000480237 FAM240AA0A1B0GVK7 77 aa6.33□□□□□ -1.4
LINC00173-203ENST00000480237 CCKP06307 115 aa6.33□□□□□ -1.4
LINC00173-203ENST00000480237 PDE6GP18545 87 aa6.33□□□□□ -1.4
LINC00173-203ENST00000480237 SPRR1BP22528 89 aa6.33□□□□□ -1.4
LINC00173-203ENST00000480237 XGP55808 180 aa6.33□□□□□ -1.4
LINC00173-203ENST00000480237 Q6ZQT0 140 aa6.33□□□□□ -1.4
LINC00173-203ENST00000480237 RPL37AP61513 92 aaKnown RBP6.32□□□□□ -1.4
LINC00173-203ENST00000480237 SMIM29Q86T20 159 aa6.32□□□□□ -1.4
LINC00173-203ENST00000480237 ACYP1P07311 99 aa6.31□□□□□ -1.4
LINC00173-203ENST00000480237 SMR3BP02814 79 aaPredicted RBP6.3□□□□□ -1.4
LINC00173-203ENST00000480237 LINC00483Q53H64 154 aa6.3□□□□□ -1.4
LINC00173-203ENST00000480237 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
LINC00173-203ENST00000480237 C9orf153Q5TBE3 101 aa6.29□□□□□ -1.4
LINC00173-203ENST00000480237 IGLV9-49A0A0B4J1Y8 123 aa6.28□□□□□ -1.4
LINC00173-203ENST00000480237 IGLV8-61A0A075B6I0 122 aa6.27□□□□□ -1.41
LINC00173-203ENST00000480237 Q6JHZ5 121 aa6.27□□□□□ -1.41
LINC00173-203ENST00000480237 IGFL1Q6UW32 110 aa6.27□□□□□ -1.41
LINC00173-203ENST00000480237 KRTAP4-2Q9BYR5 136 aa6.26□□□□□ -1.41
LINC00173-203ENST00000480237 ANAPC11Q9NYG5 84 aa6.26□□□□□ -1.41
LINC00173-203ENST00000480237 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
LINC00173-203ENST00000480237 MOBPQ13875 183 aa6.25□□□□□ -1.41
LINC00173-203ENST00000480237 Q8NBF4 154 aa6.25□□□□□ -1.41
LINC00173-203ENST00000480237 LINC00846Q9NV44 126 aa6.25□□□□□ -1.41
LINC00173-203ENST00000480237 A0A1W2PNM2 257 aa6.24□□□□□ -1.41
LINC00173-203ENST00000480237 A0A0G2JQZ4 141 aa6.23□□□□□ -1.41
LINC00173-203ENST00000480237 CDK2AP2O75956 126 aa6.23□□□□□ -1.41
LINC00173-203ENST00000480237 UBL5Q9BZL1 73 aa6.23□□□□□ -1.41
LINC00173-203ENST00000480237 SPINK6Q6UWN8 80 aa6.23□□□□□ -1.41
LINC00173-203ENST00000480237 FAM229BQ4G0N7 80 aa6.21□□□□□ -1.42
LINC00173-203ENST00000480237 LINC00643Q86TS7 51 aa6.21□□□□□ -1.42
LINC00173-203ENST00000480237 FAT1Q14517 4588 aa6.2□□□□□ -1.42
LINC00173-203ENST00000480237 A0A1B0GW54 56 aa6.2□□□□□ -1.42
LINC00173-203ENST00000480237 HSPG2P98160 4391 aa6.2□□□□□ -1.42
LINC00173-203ENST00000480237 MT-ATP8P03928 68 aa6.19□□□□□ -1.42
LINC00173-203ENST00000480237 CRYGAP11844 174 aa6.19□□□□□ -1.42
LINC00173-203ENST00000480237 Q6ZVQ6 151 aa6.19□□□□□ -1.42
LINC00173-203ENST00000480237 KRTAP10-4P60372 401 aaPredicted RBP6.18□□□□□ -1.42
LINC00173-203ENST00000480237 A0A087X002 238 aa6.18□□□□□ -1.42
LINC00173-203ENST00000480237 KRTAP1-4P0C5Y4 121 aa6.18□□□□□ -1.42
LINC00173-203ENST00000480237 Q5VSD8 79 aa6.18□□□□□ -1.42
LINC00173-203ENST00000480237 Q6Q795 121 aa6.18□□□□□ -1.42
LINC00173-203ENST00000480237 A0A087WSZ3 146 aa6.17□□□□□ -1.42
LINC00173-203ENST00000480237 NREPQ16612 68 aa6.17□□□□□ -1.42
LINC00173-203ENST00000480237 HRCT1Q6UXD1 115 aa6.17□□□□□ -1.42
LINC00173-203ENST00000480237 IGKV3D-7A0A0C4DH55 119 aa6.16□□□□□ -1.42
LINC00173-203ENST00000480237 ATP5EP2Q5VTU8 51 aa6.16□□□□□ -1.42
LINC00173-203ENST00000480237 ANAPC13Q9BS18 74 aa6.16□□□□□ -1.42
LINC00173-203ENST00000480237 TRBV7-7A0A0K0K1E9 115 aa6.15□□□□□ -1.42
LINC00173-203ENST00000480237 KRTAP13-2Q52LG2 175 aa6.15□□□□□ -1.42
LINC00173-203ENST00000480237 SSBP3-AS1Q7Z2R9 100 aa6.15□□□□□ -1.42
LINC00173-203ENST00000480237 RYR1P21817 5038 aa6.15□□□□□ -1.43
LINC00173-203ENST00000480237 EPPK1P58107 5090 aaKnown RBP6.14□□□□□ -1.43
LINC00173-203ENST00000480237 KRTAP4-5Q9BYR2 181 aa6.14□□□□□ -1.43
LINC00173-203ENST00000480237 SS18L2Q9UHA2 77 aa6.13□□□□□ -1.43
LINC00173-203ENST00000480237 TYMSOSQ8TAI1 123 aa6.12□□□□□ -1.43
LINC00173-203ENST00000480237 IMUPQ9GZP8 106 aa6.12□□□□□ -1.43
LINC00173-203ENST00000480237 BPY2O14599 106 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms