RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 CKS1BP61024 79 aa-0.23□□□□□ -2.45
CCDC58-204ENST00000479414 Q6JHZ5 121 aa-0.23□□□□□ -2.45
CCDC58-204ENST00000479414 Q6ZUT4 128 aa-0.23□□□□□ -2.45
CCDC58-204ENST00000479414 TSTD1Q8NFU3 115 aa-0.23□□□□□ -2.45
CCDC58-204ENST00000479414 C10orf82Q8WW14 230 aa-0.23□□□□□ -2.45
CCDC58-204ENST00000479414 TMEM191AQ9H0A3 160 aa-0.23□□□□□ -2.45
CCDC58-204ENST00000479414 PAIP2BQ9ULR5 123 aaKnown RBP-0.23□□□□□ -2.45
CCDC58-204ENST00000479414 LENEPQ9Y5L5 61 aa-0.23□□□□□ -2.45
CCDC58-204ENST00000479414 G3V318 75 aa-0.24□□□□□ -2.45
CCDC58-204ENST00000479414 KRTAP19-5Q3LI72 72 aa-0.24□□□□□ -2.45
CCDC58-204ENST00000479414 DPH3Q96FX2 82 aa-0.24□□□□□ -2.45
CCDC58-204ENST00000479414 PPP3R2Q96LZ3 170 aa-0.24□□□□□ -2.45
CCDC58-204ENST00000479414 F8VRH5 84 aa-0.25□□□□□ -2.45
CCDC58-204ENST00000479414 M0R129 80 aa-0.25□□□□□ -2.45
CCDC58-204ENST00000479414 SSSCA1O60232 199 aa-0.25□□□□□ -2.45
CCDC58-204ENST00000479414 CCL18P55774 89 aa-0.25□□□□□ -2.45
CCDC58-204ENST00000479414 RPS29P62273 56 aaKnown RBP-0.25□□□□□ -2.45
CCDC58-204ENST00000479414 ALX1Q15699 326 aa-0.25□□□□□ -2.45
CCDC58-204ENST00000479414 MYOZ3Q8TDC0 251 aa-0.25□□□□□ -2.45
CCDC58-204ENST00000479414 DYNLRB1Q9NP97 96 aa-0.25□□□□□ -2.45
CCDC58-204ENST00000479414 ROCK2O75116 1388 aaKnown RBP-0.25□□□□□ -2.45
CCDC58-204ENST00000479414 FAM25AB3EWG3 89 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 FAM25CB3EWG5 89 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 FAM25GB3EWG6 89 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 HCG22E2RYF7 251 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 ARPC5O15511 151 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 MGPP08493 103 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 TSPAN19P0C672 248 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 DR1Q01658 176 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 MGST2Q99735 147 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 PDCD10Q9BUL8 212 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 RERGLQ9H628 205 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 UQCR10Q9UDW1 63 aa-0.26□□□□□ -2.45
CCDC58-204ENST00000479414 FAM236AA0A1B0GUQ0 79 aa-0.27□□□□□ -2.45
CCDC58-204ENST00000479414 FAM236BA0A1B0GV22 79 aa-0.27□□□□□ -2.45
CCDC58-204ENST00000479414 DEFB4AO15263 64 aa-0.27□□□□□ -2.45
CCDC58-204ENST00000479414 DEFA5Q01523 94 aa-0.27□□□□□ -2.45
CCDC58-204ENST00000479414 DEFB112Q30KQ8 113 aa-0.27□□□□□ -2.45
CCDC58-204ENST00000479414 AMELXQ99217 191 aa-0.27□□□□□ -2.45
CCDC58-204ENST00000479414 SDF2Q99470 211 aa-0.27□□□□□ -2.45
CCDC58-204ENST00000479414 NAA60Q9H7X0 242 aa-0.27□□□□□ -2.45
CCDC58-204ENST00000479414 TRBV7-4A0A0J9YYF1 115 aa-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 C20orf202A1L168 122 aa-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 LINC00694P0DN24 101 aa-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 SPRR1BP22528 89 aa-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 AKAP14Q86UN6 197 aa-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 C8orf59Q8N0T1 100 aaPredicted RBP-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 Q8N8P6 123 aa-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 DEFB105AQ8NG35 78 aa-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 ARL11Q969Q4 196 aa-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 SNRNP25Q9BV90 132 aaKnown RBP-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 TTTY10Q9BZA0 68 aa-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 AGPAT4-IT1Q9H0P7 198 aa-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 PRO1933Q9H354 126 aa-0.28□□□□□ -2.45
CCDC58-204ENST00000479414 H3BSH0 61 aa-0.29□□□□□ -2.46
CCDC58-204ENST00000479414 SFT2D2O95562 160 aa-0.29□□□□□ -2.46
CCDC58-204ENST00000479414 ARPC4P59998 168 aa-0.29□□□□□ -2.46
CCDC58-204ENST00000479414 RPS25P62851 125 aaKnown RBP-0.29□□□□□ -2.46
CCDC58-204ENST00000479414 DEFB133Q30KQ1 61 aa-0.29□□□□□ -2.46
CCDC58-204ENST00000479414 TMEM263Q8WUH6 116 aaKnown RBP-0.29□□□□□ -2.46
CCDC58-204ENST00000479414 NDUFA4L2Q9NRX3 87 aa-0.29□□□□□ -2.46
CCDC58-204ENST00000479414 F6UZH7 168 aa-0.3□□□□□ -2.46
CCDC58-204ENST00000479414 APOC2P02655 101 aa-0.3□□□□□ -2.46
CCDC58-204ENST00000479414 PRM1P04553 51 aa-0.3□□□□□ -2.46
CCDC58-204ENST00000479414 CD52P31358 61 aa-0.3□□□□□ -2.46
CCDC58-204ENST00000479414 SELENOWP63302 87 aa-0.3□□□□□ -2.46
CCDC58-204ENST00000479414 DEFB135Q30KP9 77 aa-0.3□□□□□ -2.46
CCDC58-204ENST00000479414 C9orf153Q5TBE3 101 aa-0.3□□□□□ -2.46
CCDC58-204ENST00000479414 MRPL54Q6P161 138 aaKnown RBP-0.3□□□□□ -2.46
CCDC58-204ENST00000479414 DEFB108BQ8NET1 73 aa-0.3□□□□□ -2.46
CCDC58-204ENST00000479414 SPANXDQ9BXN6 97 aa-0.3□□□□□ -2.46
CCDC58-204ENST00000479414 TCHHQ07283 1943 aa-0.3□□□□□ -2.46
CCDC58-204ENST00000479414 TRBV7-3A0A075B6L6 115 aa-0.31□□□□□ -2.46
CCDC58-204ENST00000479414 DEFB131BA0A096LNP1 70 aa-0.31□□□□□ -2.46
CCDC58-204ENST00000479414 DEFB136Q30KP8 78 aa-0.31□□□□□ -2.46
CCDC58-204ENST00000479414 Q56UQ5 140 aa-0.31□□□□□ -2.46
CCDC58-204ENST00000479414 Q6AWC8 147 aa-0.31□□□□□ -2.46
CCDC58-204ENST00000479414 ANP32BQ92688 251 aaKnown RBP-0.31□□□□□ -2.46
CCDC58-204ENST00000479414 VAMP8Q9BV40 100 aa-0.31□□□□□ -2.46
CCDC58-204ENST00000479414 Q9Y3F1 56 aa-0.31□□□□□ -2.46
CCDC58-204ENST00000479414 LINC01558Q9Y6Z2 57 aa-0.31□□□□□ -2.46
CCDC58-204ENST00000479414 IGLC7A0M8Q6 106 aa-0.32□□□□□ -2.46
CCDC58-204ENST00000479414 C9orf92A6NGG3 77 aa-0.32□□□□□ -2.46
CCDC58-204ENST00000479414 H0YGG7 62 aa-0.32□□□□□ -2.46
CCDC58-204ENST00000479414 KLK9Q2XQG4 91 aa-0.32□□□□□ -2.46
CCDC58-204ENST00000479414 NXT2Q9NPJ8 142 aaKnown RBP-0.32□□□□□ -2.46
CCDC58-204ENST00000479414 CRIPTQ9P021 101 aa-0.32□□□□□ -2.46
CCDC58-204ENST00000479414 SERP1Q9Y6X1 66 aa-0.32□□□□□ -2.46
CCDC58-204ENST00000479414 A0A1B0GWA3 101 aa-0.33□□□□□ -2.46
CCDC58-204ENST00000479414 PITX3O75364 302 aa-0.33□□□□□ -2.46
CCDC58-204ENST00000479414 TRAPPC2P0DI81 140 aa-0.33□□□□□ -2.46
CCDC58-204ENST00000479414 TRAPPC2BP0DI82 140 aa-0.33□□□□□ -2.46
CCDC58-204ENST00000479414 SMIM21Q3B7S5 101 aa-0.33□□□□□ -2.46
CCDC58-204ENST00000479414 CCDC58Q4VC31 144 aa-0.33□□□□□ -2.46
CCDC58-204ENST00000479414 NCMAPQ5T1S8 102 aa-0.33□□□□□ -2.46
CCDC58-204ENST00000479414 LINC00959A0A1B0GUT2 108 aa-0.34□□□□□ -2.46
CCDC58-204ENST00000479414 FAM24AA6NFZ4 105 aa-0.34□□□□□ -2.46
CCDC58-204ENST00000479414 CPSF4LA6NMK7 179 aaKnown RBP-0.34□□□□□ -2.46
CCDC58-204ENST00000479414 H3BUX3 64 aa-0.34□□□□□ -2.46
CCDC58-204ENST00000479414 I3L2K1 104 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms