RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 C15orf56Q8N910 161 aa4.22□□□□□ -1.73
VCP-205ENST00000479300 ORMDL1Q9P0S3 153 aa4.22□□□□□ -1.73
VCP-205ENST00000479300 LAMTOR3Q9UHA4 124 aa4.22□□□□□ -1.73
VCP-205ENST00000479300 GVQW2A0A096LPI5 108 aaPredicted RBP4.21□□□□□ -1.74
VCP-205ENST00000479300 SMIM1B2RUZ4 78 aa4.21□□□□□ -1.74
VCP-205ENST00000479300 CHTF8P0CG12 524 aa4.21□□□□□ -1.74
VCP-205ENST00000479300 CD164L2Q6UWJ8 174 aa4.21□□□□□ -1.74
VCP-205ENST00000479300 SPACA4Q8TDM5 124 aa4.21□□□□□ -1.74
VCP-205ENST00000479300 UBL5Q9BZL1 73 aa4.21□□□□□ -1.74
VCP-205ENST00000479300 CDC42SE2Q9NRR3 84 aa4.21□□□□□ -1.74
VCP-205ENST00000479300 TRAV23DV6A0A075B6W5 121 aa4.2□□□□□ -1.74
VCP-205ENST00000479300 TRBV7-6A0A0J9YX20 115 aa4.2□□□□□ -1.74
VCP-205ENST00000479300 ERC2-IT1O76042 136 aa4.2□□□□□ -1.74
VCP-205ENST00000479300 SYCNQ0VAF6 134 aa4.2□□□□□ -1.74
VCP-205ENST00000479300 Q6ZRU5 148 aa4.2□□□□□ -1.74
VCP-205ENST00000479300 SMIM11BQ8TCY0 68 aa4.2□□□□□ -1.74
VCP-205ENST00000479300 PLAC8Q9NZF1 115 aa4.2□□□□□ -1.74
VCP-205ENST00000479300 NCR3O14931 201 aa4.19□□□□□ -1.74
VCP-205ENST00000479300 SLPIP03973 132 aa4.19□□□□□ -1.74
VCP-205ENST00000479300 RNASE13Q5GAN3 156 aaKnown RBP4.19□□□□□ -1.74
VCP-205ENST00000479300 C9orf129Q5T035 196 aaKnown RBP4.19□□□□□ -1.74
VCP-205ENST00000479300 LINC00242Q5T6M2 205 aa4.19□□□□□ -1.74
VCP-205ENST00000479300 MIR7-3HGQ8N6C7 128 aa4.19□□□□□ -1.74
VCP-205ENST00000479300 LINC00337Q8N6G1 96 aa4.19□□□□□ -1.74
VCP-205ENST00000479300 CAMK2N2Q96S95 79 aa4.19□□□□□ -1.74
VCP-205ENST00000479300 SND1-IT1Q9HBX3 110 aa4.19□□□□□ -1.74
VCP-205ENST00000479300 LPAP08519 4548 aa4.19□□□□□ -1.74
VCP-205ENST00000479300 IGKV2-28A0A075B6P5 120 aa4.18□□□□□ -1.74
VCP-205ENST00000479300 F8WEM9 126 aa4.18□□□□□ -1.74
VCP-205ENST00000479300 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
VCP-205ENST00000479300 IGKV2D-28P01615 120 aa4.18□□□□□ -1.74
VCP-205ENST00000479300 RBM3P98179 157 aaKnown RBP4.18□□□□□ -1.74
VCP-205ENST00000479300 C6orf226Q5I0X4 101 aa4.18□□□□□ -1.74
VCP-205ENST00000479300 FAM19A1Q7Z5A9 133 aa4.18□□□□□ -1.74
VCP-205ENST00000479300 BRK1Q8WUW1 75 aa4.18□□□□□ -1.74
VCP-205ENST00000479300 A0A096LNI7 61 aa4.17□□□□□ -1.74
VCP-205ENST00000479300 H3BQ85 93 aa4.17□□□□□ -1.74
VCP-205ENST00000479300 CXCL6P80162 114 aa4.17□□□□□ -1.74
VCP-205ENST00000479300 PRR15Q8IV56 129 aa4.17□□□□□ -1.74
VCP-205ENST00000479300 KRTAP9-2Q9BYQ4 174 aa4.17□□□□□ -1.74
VCP-205ENST00000479300 LOC110117498A0A087WWA1 95 aa4.16□□□□□ -1.74
VCP-205ENST00000479300 A0A0U1RRA0 63 aa4.16□□□□□ -1.74
VCP-205ENST00000479300 PDE6GP18545 87 aa4.16□□□□□ -1.74
VCP-205ENST00000479300 KRTAP10-8P60410 259 aa4.16□□□□□ -1.74
VCP-205ENST00000479300 SPAG11BQ08648 103 aa4.16□□□□□ -1.74
VCP-205ENST00000479300 REG3GQ6UW15 175 aa4.16□□□□□ -1.74
VCP-205ENST00000479300 Q6ZRP5 223 aa4.16□□□□□ -1.74
VCP-205ENST00000479300 MUC2Q02817 5179 aa4.15□□□□□ -1.74
VCP-205ENST00000479300 TRBV7-4A0A0J9YYF1 115 aa4.15□□□□□ -1.75
VCP-205ENST00000479300 PRR3P79522 188 aaKnown RBP4.15□□□□□ -1.75
VCP-205ENST00000479300 COX7B2Q8TF08 81 aa4.15□□□□□ -1.75
VCP-205ENST00000479300 A0A0U1RQV1 116 aa4.14□□□□□ -1.75
VCP-205ENST00000479300 SPINK6Q6UWN8 80 aa4.14□□□□□ -1.75
VCP-205ENST00000479300 Q6ZQT0 140 aa4.14□□□□□ -1.75
VCP-205ENST00000479300 LINC01547P58512 204 aaPredicted RBP4.13□□□□□ -1.75
VCP-205ENST00000479300 LINC00158P58513 81 aa4.13□□□□□ -1.75
VCP-205ENST00000479300 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
VCP-205ENST00000479300 SNURFQ9Y675 71 aa4.13□□□□□ -1.75
VCP-205ENST00000479300 CD164Q04900 197 aa4.12□□□□□ -1.75
VCP-205ENST00000479300 C9orf116Q5BN46 136 aaPredicted RBP4.12□□□□□ -1.75
VCP-205ENST00000479300 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
VCP-205ENST00000479300 IGHV3OR16-9A0A0B4J2B5 98 aa4.11□□□□□ -1.75
VCP-205ENST00000479300 NREPQ16612 68 aa4.11□□□□□ -1.75
VCP-205ENST00000479300 Q6ZVQ6 151 aa4.11□□□□□ -1.75
VCP-205ENST00000479300 TMEM254Q8TBM7 123 aa4.11□□□□□ -1.75
VCP-205ENST00000479300 A0A087WZ39 114 aa4.1□□□□□ -1.75
VCP-205ENST00000479300 PRYO14603 147 aa4.1□□□□□ -1.75
VCP-205ENST00000479300 UBE2BP63146 152 aa4.1□□□□□ -1.75
VCP-205ENST00000479300 C1orf137Q5JT78 98 aa4.1□□□□□ -1.75
VCP-205ENST00000479300 UNQ6190/PRO20217Q6UXQ8 127 aa4.1□□□□□ -1.75
VCP-205ENST00000479300 TOMM7Q9P0U1 55 aa4.1□□□□□ -1.75
VCP-205ENST00000479300 KRTAP9-6A0A140TA67 174 aa4.09□□□□□ -1.75
VCP-205ENST00000479300 A0A1W2PNN7 141 aa4.09□□□□□ -1.75
VCP-205ENST00000479300 TLX1NBP0CAT3 122 aa4.09□□□□□ -1.75
VCP-205ENST00000479300 Q1T7F1 81 aa4.09□□□□□ -1.75
VCP-205ENST00000479300 PHF5AQ7RTV0 110 aaKnown RBP4.09□□□□□ -1.75
VCP-205ENST00000479300 DIRC1Q969H9 104 aa4.09□□□□□ -1.75
VCP-205ENST00000479300 PSORS1C2Q9UIG4 136 aa4.09□□□□□ -1.75
VCP-205ENST00000479300 FAM229BQ4G0N7 80 aa4.08□□□□□ -1.76
VCP-205ENST00000479300 XP32Q5T750 250 aa4.08□□□□□ -1.76
VCP-205ENST00000479300 C6orf48Q9UBA6 75 aa4.08□□□□□ -1.76
VCP-205ENST00000479300 BPY2O14599 106 aa4.07□□□□□ -1.76
VCP-205ENST00000479300 C10orf25Q5T742 122 aa4.07□□□□□ -1.76
VCP-205ENST00000479300 LINC00575Q6W349 94 aa4.07□□□□□ -1.76
VCP-205ENST00000479300 Q8IZM0 81 aa4.07□□□□□ -1.76
VCP-205ENST00000479300 MPLKIPQ8TAP9 179 aa4.07□□□□□ -1.76
VCP-205ENST00000479300 hDV103S1A0JD37 113 aa4.06□□□□□ -1.76
VCP-205ENST00000479300 IGLV7-43P04211 117 aa4.06□□□□□ -1.76
VCP-205ENST00000479300 COX17Q14061 63 aa4.06□□□□□ -1.76
VCP-205ENST00000479300 KIAA0087Q14695 138 aa4.06□□□□□ -1.76
VCP-205ENST00000479300 OCR1Q9BZK8 76 aa4.06□□□□□ -1.76
VCP-205ENST00000479300 FAM168BA1KXE4 195 aa4.05□□□□□ -1.76
VCP-205ENST00000479300 H0Y9J4 135 aa4.04□□□□□ -1.76
VCP-205ENST00000479300 C6orf99Q4VX62 202 aa4.03□□□□□ -1.76
VCP-205ENST00000479300 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.03□□□□□ -1.76
VCP-205ENST00000479300 CYP4F30PQ9H0H9 118 aa4.03□□□□□ -1.76
VCP-205ENST00000479300 XAGE1AQ9HD64 81 aa4.03□□□□□ -1.76
VCP-205ENST00000479300 IGLV1-50A0A075B6I6 118 aa4.02□□□□□ -1.77
VCP-205ENST00000479300 KRTAP23-1A1A580 65 aa4.02□□□□□ -1.77
VCP-205ENST00000479300 IGKV4-1P06312 121 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms