RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 FAM19A1Q7Z5A9 133 aa2.58□□□□□ -2
USP25-208ENST00000478932 DHRS4-AS1Q9P1J3 65 aa2.58□□□□□ -2
USP25-208ENST00000478932 IGKV3D-7A0A0C4DH55 119 aa2.58□□□□□ -2
USP25-208ENST00000478932 LINC01547P58512 204 aaPredicted RBP2.58□□□□□ -2
USP25-208ENST00000478932 LINC00476Q8WZB0 136 aa2.58□□□□□ -2
USP25-208ENST00000478932 A0A0G2JQZ4 141 aa2.57□□□□□ -2
USP25-208ENST00000478932 RTL8CO15255 209 aa2.57□□□□□ -2
USP25-208ENST00000478932 LINC00474Q9P2X8 69 aa2.57□□□□□ -2
USP25-208ENST00000478932 KMT2CQ8NEZ4 4911 aaKnown RBP2.57□□□□□ -2
USP25-208ENST00000478932 LOC110117498A0A087WWA1 95 aa2.57□□□□□ -2
USP25-208ENST00000478932 TRBV7-4A0A0J9YYF1 115 aa2.57□□□□□ -2
USP25-208ENST00000478932 EPM2AB3EWF7 344 aa2.57□□□□□ -2
USP25-208ENST00000478932 SCGB1A1P11684 91 aa2.57□□□□□ -2
USP25-208ENST00000478932 DNAH11Q96DT5 4516 aa2.57□□□□□ -2
USP25-208ENST00000478932 A0A087WVE0 104 aa2.56□□□□□ -2
USP25-208ENST00000478932 TRBV7-7A0A0K0K1E9 115 aa2.56□□□□□ -2
USP25-208ENST00000478932 H3BQ85 93 aa2.56□□□□□ -2
USP25-208ENST00000478932 SPACA4Q8TDM5 124 aa2.56□□□□□ -2
USP25-208ENST00000478932 IGLV5-52A0A0A0MRZ9 124 aa2.56□□□□□ -2
USP25-208ENST00000478932 C3orf84H3BNL1 204 aa2.56□□□□□ -2
USP25-208ENST00000478932 KRTAP10-2P60368 255 aa2.56□□□□□ -2
USP25-208ENST00000478932 HAMPP81172 84 aa2.56□□□□□ -2
USP25-208ENST00000478932 UBL5Q9BZL1 73 aa2.56□□□□□ -2
USP25-208ENST00000478932 IGLV5-48A0A075B6I7 105 aa2.55□□□□□ -2
USP25-208ENST00000478932 FAM236AA0A1B0GUQ0 79 aa2.55□□□□□ -2
USP25-208ENST00000478932 FAM236BA0A1B0GV22 79 aa2.55□□□□□ -2
USP25-208ENST00000478932 PDE6GP18545 87 aa2.55□□□□□ -2
USP25-208ENST00000478932 HIST1H4AP62805 103 aaKnown RBP2.55□□□□□ -2
USP25-208ENST00000478932 UBE2AP49459 152 aa2.55□□□□□ -2
USP25-208ENST00000478932 Q6ZVQ6 151 aa2.55□□□□□ -2
USP25-208ENST00000478932 SMIM29Q86T20 159 aa2.55□□□□□ -2
USP25-208ENST00000478932 ANAPC13Q9BS18 74 aa2.55□□□□□ -2
USP25-208ENST00000478932 IMUPQ9GZP8 106 aa2.55□□□□□ -2
USP25-208ENST00000478932 DNAH17Q9UFH2 4485 aa2.55□□□□□ -2
USP25-208ENST00000478932 C1orf137Q5JT78 98 aa2.55□□□□□ -2
USP25-208ENST00000478932 Q6Q795 121 aa2.55□□□□□ -2
USP25-208ENST00000478932 SCXQ7RTU7 201 aa2.55□□□□□ -2
USP25-208ENST00000478932 FAM30AQ9NZY2 134 aa2.55□□□□□ -2
USP25-208ENST00000478932 LRP1BQ9NZR2 4599 aa2.54□□□□□ -2
USP25-208ENST00000478932 A0A1W2PNM2 257 aa2.54□□□□□ -2
USP25-208ENST00000478932 FAT2Q9NYQ8 4349 aa2.54□□□□□ -2
USP25-208ENST00000478932 Q6JHZ5 121 aa2.54□□□□□ -2
USP25-208ENST00000478932 PSORS1C2Q9UIG4 136 aa2.54□□□□□ -2
USP25-208ENST00000478932 H0Y9J4 135 aa2.53□□□□□ -2
USP25-208ENST00000478932 BCE1O60756 84 aa2.53□□□□□ -2
USP25-208ENST00000478932 Q8N9L7 120 aa2.53□□□□□ -2
USP25-208ENST00000478932 ANAPC11Q9NYG5 84 aa2.53□□□□□ -2
USP25-208ENST00000478932 PKIGQ9Y2B9 76 aa2.53□□□□□ -2
USP25-208ENST00000478932 DNAH8Q96JB1 4490 aa2.53□□□□□ -2
USP25-208ENST00000478932 PKD1P98161 4303 aa2.53□□□□□ -2
USP25-208ENST00000478932 F8WEM9 126 aa2.53□□□□□ -2.01
USP25-208ENST00000478932 NREPQ16612 68 aa2.53□□□□□ -2.01
USP25-208ENST00000478932 KRTAP19-4Q3LI73 84 aa2.53□□□□□ -2.01
USP25-208ENST00000478932 KRTAP13-1Q8IUC0 172 aa2.53□□□□□ -2.01
USP25-208ENST00000478932 CIRBP-AS1Q8TBR5 109 aa2.53□□□□□ -2.01
USP25-208ENST00000478932 PLAC8Q9NZF1 115 aa2.53□□□□□ -2.01
USP25-208ENST00000478932 DNAH5Q8TE73 4624 aa2.52□□□□□ -2.01
USP25-208ENST00000478932 LCE5AQ5TCM9 118 aa2.52□□□□□ -2.01
USP25-208ENST00000478932 IGFL1Q6UW32 110 aa2.52□□□□□ -2.01
USP25-208ENST00000478932 DEFB116Q30KQ4 102 aa2.52□□□□□ -2.01
USP25-208ENST00000478932 VPS13BQ7Z7G8 4022 aa2.52□□□□□ -2.01
USP25-208ENST00000478932 SACSQ9NZJ4 4579 aa2.51□□□□□ -2.01
USP25-208ENST00000478932 CCDC179H3BU77 68 aa2.51□□□□□ -2.01
USP25-208ENST00000478932 KRTAP10-1P60331 282 aa2.51□□□□□ -2.01
USP25-208ENST00000478932 Q8NBF4 154 aa2.51□□□□□ -2.01
USP25-208ENST00000478932 A0A087WSZ3 146 aa2.51□□□□□ -2.01
USP25-208ENST00000478932 IGLV9-49A0A0B4J1Y8 123 aa2.51□□□□□ -2.01
USP25-208ENST00000478932 CRYGAP11844 174 aa2.51□□□□□ -2.01
USP25-208ENST00000478932 BPY2O14599 106 aa2.5□□□□□ -2.01
USP25-208ENST00000478932 CXCL6P80162 114 aa2.5□□□□□ -2.01
USP25-208ENST00000478932 ATP5EP2Q5VTU8 51 aa2.5□□□□□ -2.01
USP25-208ENST00000478932 SPRR4Q96PI1 79 aa2.5□□□□□ -2.01
USP25-208ENST00000478932 ZNF861PO60384 105 aa2.5□□□□□ -2.01
USP25-208ENST00000478932 SPRR1BP22528 89 aa2.5□□□□□ -2.01
USP25-208ENST00000478932 IGLV8-61A0A075B6I0 122 aa2.49□□□□□ -2.01
USP25-208ENST00000478932 HRCT1Q6UXD1 115 aa2.49□□□□□ -2.01
USP25-208ENST00000478932 ATOX1O00244 68 aa2.48□□□□□ -2.01
USP25-208ENST00000478932 IGLV7-43P04211 117 aa2.48□□□□□ -2.01
USP25-208ENST00000478932 C9orf153Q5TBE3 101 aa2.48□□□□□ -2.01
USP25-208ENST00000478932 Q6ZSA8 131 aa2.48□□□□□ -2.01
USP25-208ENST00000478932 ALMS1Q8TCU4 4167 aa2.48□□□□□ -2.01
USP25-208ENST00000478932 FLG2Q5D862 2391 aaPredicted RBP2.48□□□□□ -2.01
USP25-208ENST00000478932 FAT1Q14517 4588 aa2.48□□□□□ -2.01
USP25-208ENST00000478932 A0A1B0GW54 56 aa2.48□□□□□ -2.01
USP25-208ENST00000478932 DSCR10P59022 87 aa2.48□□□□□ -2.01
USP25-208ENST00000478932 K7EQZ3 153 aa2.47□□□□□ -2.01
USP25-208ENST00000478932 IGKV4-1P06312 121 aa2.47□□□□□ -2.01
USP25-208ENST00000478932 MOBPQ13875 183 aa2.47□□□□□ -2.01
USP25-208ENST00000478932 LCE4AQ5TA78 99 aa2.47□□□□□ -2.01
USP25-208ENST00000478932 LCE6AA0A183 80 aa2.47□□□□□ -2.01
USP25-208ENST00000478932 RPL37AP61513 92 aaKnown RBP2.47□□□□□ -2.01
USP25-208ENST00000478932 SERP2Q8N6R1 65 aa2.47□□□□□ -2.01
USP25-208ENST00000478932 DMBT1Q9UGM3 2413 aaPredicted RBP2.46□□□□□ -2.01
USP25-208ENST00000478932 UQCRQO14949 82 aa2.46□□□□□ -2.02
USP25-208ENST00000478932 COX7CP15954 63 aa2.46□□□□□ -2.02
USP25-208ENST00000478932 LINC00483Q53H64 154 aa2.46□□□□□ -2.02
USP25-208ENST00000478932 CYSTM1Q9H1C7 97 aa2.46□□□□□ -2.02
USP25-208ENST00000478932 RYR3Q15413 4870 aa2.46□□□□□ -2.02
USP25-208ENST00000478932 RYR2Q92736 4967 aa2.46□□□□□ -2.02
USP25-208ENST00000478932 SMR3BP02814 79 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms