RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 ZNF469Q96JG9 3925 aaPredicted RBP2.76□□□□□ -1.97
GPNMB-210ENST00000478451 IGLV5-48A0A075B6I7 105 aa2.75□□□□□ -1.97
GPNMB-210ENST00000478451 TRAV10A0A0B4J240 114 aa2.75□□□□□ -1.97
GPNMB-210ENST00000478451 KRTAP10-8P60410 259 aa2.75□□□□□ -1.97
GPNMB-210ENST00000478451 KRTAP26-1Q6PEX3 210 aa2.75□□□□□ -1.97
GPNMB-210ENST00000478451 TMEM254Q8TBM7 123 aa2.75□□□□□ -1.97
GPNMB-210ENST00000478451 PKIGQ9Y2B9 76 aa2.75□□□□□ -1.97
GPNMB-210ENST00000478451 TEP1Q99973 2627 aaKnown RBP2.75□□□□□ -1.97
GPNMB-210ENST00000478451 MTORP42345 2549 aa2.75□□□□□ -1.97
GPNMB-210ENST00000478451 UNC79Q9P2D8 2635 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 ITPR2Q14571 2701 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 NSD1Q96L73 2696 aaPredicted RBP2.74□□□□□ -1.97
GPNMB-210ENST00000478451 IGLV8-61A0A075B6I0 122 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 DEFB131BA0A096LNP1 70 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 M0R2N4 97 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 IGKV4-1P06312 121 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 DNAH10OSP0CZ25 163 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 KRTAP13-3Q3SY46 172 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 Q6ZRX8 168 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 SCXQ7RTU7 201 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 TYMSOSQ8TAI1 123 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 C7orf33Q8WU49 177 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 SMR3AQ99954 134 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 NBEAL2Q6ZNJ1 2754 aa2.74□□□□□ -1.97
GPNMB-210ENST00000478451 FN1P02751 2386 aaKnown RBP2.74□□□□□ -1.97
GPNMB-210ENST00000478451 ACANP16112 2415 aa2.73□□□□□ -1.97
GPNMB-210ENST00000478451 FASNP49327 2511 aaKnown RBP2.73□□□□□ -1.97
GPNMB-210ENST00000478451 A8MU10 97 aa2.73□□□□□ -1.97
GPNMB-210ENST00000478451 ESRGQ1W209 222 aa2.73□□□□□ -1.97
GPNMB-210ENST00000478451 C1orf137Q5JT78 98 aa2.73□□□□□ -1.97
GPNMB-210ENST00000478451 TM2D3Q9BRN9 247 aa2.73□□□□□ -1.97
GPNMB-210ENST00000478451 SNURFQ9Y675 71 aa2.73□□□□□ -1.97
GPNMB-210ENST00000478451 HIVEP1P15822 2718 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 IGLV1-50A0A075B6I6 118 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 A0A0U1RQV1 116 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 C3orf84H3BNL1 204 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 NDUFB1O75438 58 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 OXTP01178 125 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 SPRR1AP35321 89 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 KRTAP12-2P59991 146 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 UBE2BP63146 152 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 PRR4Q16378 134 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 Q5XG85 94 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 HRCT1Q6UXD1 115 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 DEFB105AQ8NG35 78 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 SPRR4Q96PI1 79 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 CUBNO60494 3623 aa2.72□□□□□ -1.97
GPNMB-210ENST00000478451 VWFP04275 2813 aa2.71□□□□□ -1.98
GPNMB-210ENST00000478451 KRTAP1-4P0C5Y4 121 aa2.71□□□□□ -1.98
GPNMB-210ENST00000478451 C4orf26Q17RF5 130 aa2.71□□□□□ -1.98
GPNMB-210ENST00000478451 MRPL55Q7Z7F7 128 aaKnown RBP2.71□□□□□ -1.98
GPNMB-210ENST00000478451 RETNQ9HD89 108 aa2.71□□□□□ -1.98
GPNMB-210ENST00000478451 PRO0628Q9UI54 55 aa2.71□□□□□ -1.98
GPNMB-210ENST00000478451 TENM1Q9UKZ4 2725 aa2.7□□□□□ -1.98
GPNMB-210ENST00000478451 LCE6AA0A183 80 aa2.7□□□□□ -1.98
GPNMB-210ENST00000478451 KRTAP4-16G5E9R7 235 aaPredicted RBP2.7□□□□□ -1.98
GPNMB-210ENST00000478451 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
GPNMB-210ENST00000478451 HELZ2Q9BYK8 2649 aaKnown RBP2.69□□□□□ -1.98
GPNMB-210ENST00000478451 A0A1W2PNM2 257 aa2.69□□□□□ -1.98
GPNMB-210ENST00000478451 HCG22E2RYF7 251 aa2.69□□□□□ -1.98
GPNMB-210ENST00000478451 H3BPC8 53 aa2.69□□□□□ -1.98
GPNMB-210ENST00000478451 MP68P56378 58 aa2.69□□□□□ -1.98
GPNMB-210ENST00000478451 Q8N9L7 120 aa2.69□□□□□ -1.98
GPNMB-210ENST00000478451 Q9BRP9 147 aa2.69□□□□□ -1.98
GPNMB-210ENST00000478451 V9GYY9 64 aa2.69□□□□□ -1.98
GPNMB-210ENST00000478451 ATRQ13535 2644 aa2.69□□□□□ -1.98
GPNMB-210ENST00000478451 PSCAO43653 123 aa2.68□□□□□ -1.98
GPNMB-210ENST00000478451 HIGD2AQ9BW72 106 aa2.68□□□□□ -1.98
GPNMB-210ENST00000478451 LINC00588Q9Y4M8 146 aa2.68□□□□□ -1.98
GPNMB-210ENST00000478451 hDV103S1A0JD37 113 aa2.67□□□□□ -1.98
GPNMB-210ENST00000478451 C16orf90A8MZG2 172 aa2.67□□□□□ -1.98
GPNMB-210ENST00000478451 H0Y9J4 135 aa2.67□□□□□ -1.98
GPNMB-210ENST00000478451 UBE2AP49459 152 aa2.67□□□□□ -1.98
GPNMB-210ENST00000478451 CNBPP62633 177 aaKnown RBP2.67□□□□□ -1.98
GPNMB-210ENST00000478451 CYP4F30PQ9H0H9 118 aa2.67□□□□□ -1.98
GPNMB-210ENST00000478451 OTOGQ6ZRI0 2925 aa2.67□□□□□ -1.98
GPNMB-210ENST00000478451 FAM168BA1KXE4 195 aa2.66□□□□□ -1.98
GPNMB-210ENST00000478451 K7EQZ3 153 aa2.66□□□□□ -1.98
GPNMB-210ENST00000478451 FP248Q71RG6 208 aaPredicted RBP2.66□□□□□ -1.98
GPNMB-210ENST00000478451 UBE2DNLQ8IWF7 75 aa2.66□□□□□ -1.98
GPNMB-210ENST00000478451 ST20-AS1Q8NBB2 130 aa2.66□□□□□ -1.98
GPNMB-210ENST00000478451 B9D2Q9BPU9 175 aa2.66□□□□□ -1.98
GPNMB-210ENST00000478451 LINC00474Q9P2X8 69 aa2.66□□□□□ -1.98
GPNMB-210ENST00000478451 HECTD1Q9ULT8 2610 aa2.66□□□□□ -1.98
GPNMB-210ENST00000478451 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.65□□□□□ -1.99
GPNMB-210ENST00000478451 SPRR1BP22528 89 aa2.65□□□□□ -1.99
GPNMB-210ENST00000478451 Q1T7F1 81 aa2.65□□□□□ -1.99
GPNMB-210ENST00000478451 IGFL1Q6UW32 110 aa2.65□□□□□ -1.99
GPNMB-210ENST00000478451 LINC00336Q6ZUF6 198 aa2.65□□□□□ -1.99
GPNMB-210ENST00000478451 SPANXA2-OT1Q8N9U9 137 aa2.65□□□□□ -1.99
GPNMB-210ENST00000478451 BRK1Q8WUW1 75 aa2.65□□□□□ -1.99
GPNMB-210ENST00000478451 ZCCHC13Q8WW36 166 aaKnown RBP2.65□□□□□ -1.99
GPNMB-210ENST00000478451 DNAH3Q8TD57 4116 aa2.65□□□□□ -1.99
GPNMB-210ENST00000478451 A0A087WSZ3 146 aa2.64□□□□□ -1.99
GPNMB-210ENST00000478451 A0A096LNI7 61 aa2.64□□□□□ -1.99
GPNMB-210ENST00000478451 RPL37AP61513 92 aaKnown RBP2.64□□□□□ -1.99
GPNMB-210ENST00000478451 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
GPNMB-210ENST00000478451 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
GPNMB-210ENST00000478451 CASC2Q6XLA1 102 aa2.64□□□□□ -1.99
GPNMB-210ENST00000478451 CMYA5Q8N3K9 4069 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms