RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 G0S2P27469 103 aa1.91□□□□□ -2.1
VPS50-214ENST00000477935 Q8NDZ9 215 aa1.91□□□□□ -2.1
VPS50-214ENST00000477935 TRBV10-3A0A0K0K1G6 114 aa1.9□□□□□ -2.11
VPS50-214ENST00000477935 LOC389332A0A1B0GUA5 103 aa1.9□□□□□ -2.11
VPS50-214ENST00000477935 A0A1B0GV50 99 aa1.9□□□□□ -2.11
VPS50-214ENST00000477935 TINCRA0A1B0GVN0 87 aa1.9□□□□□ -2.11
VPS50-214ENST00000477935 IGIPA6NJ69 53 aa1.9□□□□□ -2.11
VPS50-214ENST00000477935 H3BRM9 83 aa1.9□□□□□ -2.11
VPS50-214ENST00000477935 K7EMI3 77 aa1.9□□□□□ -2.11
VPS50-214ENST00000477935 K7EN84 100 aa1.9□□□□□ -2.11
VPS50-214ENST00000477935 FAM213BQ8TBF2 198 aa1.9□□□□□ -2.11
VPS50-214ENST00000477935 Q96NJ1 140 aa1.9□□□□□ -2.11
VPS50-214ENST00000477935 GNG13Q9P2W3 67 aa1.9□□□□□ -2.11
VPS50-214ENST00000477935 A0A1B0GW15 77 aa1.89□□□□□ -2.11
VPS50-214ENST00000477935 IFITM3Q01628 133 aa1.89□□□□□ -2.11
VPS50-214ENST00000477935 Q5BKY6 102 aa1.89□□□□□ -2.11
VPS50-214ENST00000477935 Q5VV11 94 aa1.89□□□□□ -2.11
VPS50-214ENST00000477935 ADM2Q7Z4H4 148 aa1.89□□□□□ -2.11
VPS50-214ENST00000477935 BOD1L2Q8IYS8 172 aa1.89□□□□□ -2.11
VPS50-214ENST00000477935 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
VPS50-214ENST00000477935 D6R8Y8 96 aa1.88□□□□□ -2.11
VPS50-214ENST00000477935 F8W036 122 aa1.88□□□□□ -2.11
VPS50-214ENST00000477935 SPINK8P0C7L1 97 aa1.88□□□□□ -2.11
VPS50-214ENST00000477935 HRES1P13985 223 aa1.88□□□□□ -2.11
VPS50-214ENST00000477935 HINT1P49773 126 aaPredicted RBP1.88□□□□□ -2.11
VPS50-214ENST00000477935 NDUFA6P56556 154 aa1.88□□□□□ -2.11
VPS50-214ENST00000477935 LINC00158P58513 81 aa1.88□□□□□ -2.11
VPS50-214ENST00000477935 FA2HQ7L5A8 372 aa1.88□□□□□ -2.11
VPS50-214ENST00000477935 TRBV10-2A0A0K0K1G8 114 aa1.87□□□□□ -2.11
VPS50-214ENST00000477935 NPYP01303 97 aa1.87□□□□□ -2.11
VPS50-214ENST00000477935 S100A8P05109 93 aa1.87□□□□□ -2.11
VPS50-214ENST00000477935 DDTP30046 118 aa1.87□□□□□ -2.11
VPS50-214ENST00000477935 ORMDL3Q8N138 153 aa1.87□□□□□ -2.11
VPS50-214ENST00000477935 NAT8BQ9UHF3 227 aa1.87□□□□□ -2.11
VPS50-214ENST00000477935 LAMTOR2Q9Y2Q5 125 aa1.87□□□□□ -2.11
VPS50-214ENST00000477935 LINC01549A6NIU2 74 aa1.86□□□□□ -2.11
VPS50-214ENST00000477935 LINC00587B1AMM8 73 aa1.86□□□□□ -2.11
VPS50-214ENST00000477935 NCR3O14931 201 aa1.86□□□□□ -2.11
VPS50-214ENST00000477935 PSPHP1O15172 72 aa1.86□□□□□ -2.11
VPS50-214ENST00000477935 MT1BP07438 61 aa1.86□□□□□ -2.11
VPS50-214ENST00000477935 PMVKQ15126 192 aa1.86□□□□□ -2.11
VPS50-214ENST00000477935 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
VPS50-214ENST00000477935 KRTAP8-1Q8IUC2 63 aa1.86□□□□□ -2.11
VPS50-214ENST00000477935 Q8N8P6 123 aa1.86□□□□□ -2.11
VPS50-214ENST00000477935 OSTCQ9NRP0 149 aa1.86□□□□□ -2.11
VPS50-214ENST00000477935 TEX49A0A1B0GTD5 131 aa1.85□□□□□ -2.11
VPS50-214ENST00000477935 TAL2Q16559 108 aa1.85□□□□□ -2.11
VPS50-214ENST00000477935 PRELID3AQ96N28 172 aa1.85□□□□□ -2.11
VPS50-214ENST00000477935 MAP1LC3AQ9H492 121 aa1.85□□□□□ -2.11
VPS50-214ENST00000477935 CST9LQ9H4G1 147 aa1.85□□□□□ -2.11
VPS50-214ENST00000477935 IGHV6-1A0A0B4J1U7 121 aa1.84□□□□□ -2.11
VPS50-214ENST00000477935 TMEM250H0YL14 139 aa1.84□□□□□ -2.11
VPS50-214ENST00000477935 ZNF73O43830 326 aaPredicted RBP1.84□□□□□ -2.11
VPS50-214ENST00000477935 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.11
VPS50-214ENST00000477935 S100A7L2Q5SY68 101 aa1.84□□□□□ -2.11
VPS50-214ENST00000477935 TOMM6Q96B49 74 aa1.84□□□□□ -2.11
VPS50-214ENST00000477935 IMUPQ9GZP8 106 aa1.84□□□□□ -2.11
VPS50-214ENST00000477935 TRAV23DV6A0A075B6W5 121 aa1.83□□□□□ -2.12
VPS50-214ENST00000477935 ZNF815PA8K554 130 aa1.83□□□□□ -2.12
VPS50-214ENST00000477935 LINC00299Q6ZSB3 139 aa1.83□□□□□ -2.12
VPS50-214ENST00000477935 SCGB3A1Q96QR1 104 aa1.83□□□□□ -2.12
VPS50-214ENST00000477935 MAP1LC3CQ9BXW4 147 aa1.83□□□□□ -2.12
VPS50-214ENST00000477935 R4GN34 69 aa1.83□□□□□ -2.12
VPS50-214ENST00000477935 SMIM27A0A1W2PRY6 76 aa1.82□□□□□ -2.12
VPS50-214ENST00000477935 ARPC5O15511 151 aa1.82□□□□□ -2.12
VPS50-214ENST00000477935 NXT2Q9NPJ8 142 aaKnown RBP1.82□□□□□ -2.12
VPS50-214ENST00000477935 SPANXB1Q9NS25 103 aaPredicted RBP1.82□□□□□ -2.12
VPS50-214ENST00000477935 V9GYV3 84 aa1.82□□□□□ -2.12
VPS50-214ENST00000477935 LST1O00453 97 aa1.81□□□□□ -2.12
VPS50-214ENST00000477935 NDUFC2O95298 119 aa1.81□□□□□ -2.12
VPS50-214ENST00000477935 SMIM13P0DJ93 91 aa1.81□□□□□ -2.12
VPS50-214ENST00000477935 IGLC3P0DOY3 106 aa1.81□□□□□ -2.12
VPS50-214ENST00000477935 ZNF345Q14585 488 aa1.81□□□□□ -2.12
VPS50-214ENST00000477935 MEIG1Q5JSS6 88 aa1.81□□□□□ -2.12
VPS50-214ENST00000477935 DEFB105AQ8NG35 78 aa1.81□□□□□ -2.12
VPS50-214ENST00000477935 S100ZQ8WXG8 99 aa1.81□□□□□ -2.12
VPS50-214ENST00000477935 SPRR2GQ9BYE4 73 aa1.81□□□□□ -2.12
VPS50-214ENST00000477935 A0A1B0GXF2 115 aa1.8□□□□□ -2.12
VPS50-214ENST00000477935 A0A1W2PNM2 257 aa1.8□□□□□ -2.12
VPS50-214ENST00000477935 KANTRA0A1W2PQU2 76 aa1.8□□□□□ -2.12
VPS50-214ENST00000477935 HSBP1O75506 76 aa1.8□□□□□ -2.12
VPS50-214ENST00000477935 CEBPGP53567 150 aa1.8□□□□□ -2.12
VPS50-214ENST00000477935 COMMD7Q86VX2 200 aa1.8□□□□□ -2.12
VPS50-214ENST00000477935 TRBV7-7A0A0K0K1E9 115 aa1.79□□□□□ -2.12
VPS50-214ENST00000477935 ZNF22P17026 224 aaPredicted RBP1.79□□□□□ -2.12
VPS50-214ENST00000477935 ADCYAP1P18509 176 aa1.79□□□□□ -2.12
VPS50-214ENST00000477935 Q6JHZ5 121 aa1.79□□□□□ -2.12
VPS50-214ENST00000477935 MRPL54Q6P161 138 aaKnown RBP1.79□□□□□ -2.12
VPS50-214ENST00000477935 ATP5L2Q7Z4Y8 100 aa1.79□□□□□ -2.12
VPS50-214ENST00000477935 SLC7A5P1Q8MH63 180 aa1.79□□□□□ -2.12
VPS50-214ENST00000477935 SMIM7Q9BQ49 75 aa1.79□□□□□ -2.12
VPS50-214ENST00000477935 MIEN1Q9BRT3 115 aa1.79□□□□□ -2.12
VPS50-214ENST00000477935 IGLV5-48A0A075B6I7 105 aa1.78□□□□□ -2.12
VPS50-214ENST00000477935 PRO2289Q9P1D8 64 aa1.78□□□□□ -2.12
VPS50-214ENST00000477935 F8WEM9 126 aa1.77□□□□□ -2.13
VPS50-214ENST00000477935 NDUFS5O43920 106 aa1.77□□□□□ -2.13
VPS50-214ENST00000477935 SPINK7P58062 85 aa1.77□□□□□ -2.13
VPS50-214ENST00000477935 LINC00313P59037 77 aa1.77□□□□□ -2.13
VPS50-214ENST00000477935 ELOF1P60002 83 aaKnown RBP1.77□□□□□ -2.13
VPS50-214ENST00000477935 IFITM2Q01629 132 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms