RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 GHRHP01286 108 aa8.79□□□□□ -1
COL4A6-206ENST00000477085 RBM3P98179 157 aaKnown RBP8.78□□□□□ -1
COL4A6-206ENST00000477085 ZNF861PO60384 105 aa8.78□□□□□ -1
COL4A6-206ENST00000477085 IGLV7-43P04211 117 aa8.78□□□□□ -1
COL4A6-206ENST00000477085 VPS13BQ7Z7G8 4022 aa8.77□□□□□ -1.01
COL4A6-206ENST00000477085 GAGE2AQ6NT46 116 aa8.76□□□□□ -1.01
COL4A6-206ENST00000477085 TRBV7-4A0A0J9YYF1 115 aa8.75□□□□□ -1.01
COL4A6-206ENST00000477085 SPRR1BP22528 89 aa8.75□□□□□ -1.01
COL4A6-206ENST00000477085 Q6ZQT0 140 aa8.75□□□□□ -1.01
COL4A6-206ENST00000477085 LOC110117498A0A087WWA1 95 aa8.74□□□□□ -1.01
COL4A6-206ENST00000477085 CCKP06307 115 aa8.73□□□□□ -1.01
COL4A6-206ENST00000477085 SPRR4Q96PI1 79 aa8.73□□□□□ -1.01
COL4A6-206ENST00000477085 DSCR8Q96T75 97 aa8.72□□□□□ -1.01
COL4A6-206ENST00000477085 Q6Q795 121 aa8.71□□□□□ -1.01
COL4A6-206ENST00000477085 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
COL4A6-206ENST00000477085 SMR3BP02814 79 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-206ENST00000477085 LINC00483Q53H64 154 aa8.7□□□□□ -1.02
COL4A6-206ENST00000477085 ANAPC11Q9NYG5 84 aa8.7□□□□□ -1.02
COL4A6-206ENST00000477085 LINC00643Q86TS7 51 aa8.69□□□□□ -1.02
COL4A6-206ENST00000477085 FAT1Q14517 4588 aa8.69□□□□□ -1.02
COL4A6-206ENST00000477085 TRBV7-7A0A0K0K1E9 115 aa8.68□□□□□ -1.02
COL4A6-206ENST00000477085 IGLV8-61A0A075B6I0 122 aa8.67□□□□□ -1.02
COL4A6-206ENST00000477085 LINC00846Q9NV44 126 aa8.67□□□□□ -1.02
COL4A6-206ENST00000477085 PDE6GP18545 87 aa8.66□□□□□ -1.02
COL4A6-206ENST00000477085 A0A1W2PNM2 257 aa8.66□□□□□ -1.02
COL4A6-206ENST00000477085 IGFL1Q6UW32 110 aa8.65□□□□□ -1.02
COL4A6-206ENST00000477085 ZNF706Q9Y5V0 76 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-206ENST00000477085 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-206ENST00000477085 F8WEM9 126 aa8.63□□□□□ -1.03
COL4A6-206ENST00000477085 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
COL4A6-206ENST00000477085 EPPK1P58107 5090 aaKnown RBP8.63□□□□□ -1.03
COL4A6-206ENST00000477085 IMUPQ9GZP8 106 aa8.63□□□□□ -1.03
COL4A6-206ENST00000477085 IGLV9-49A0A0B4J1Y8 123 aa8.61□□□□□ -1.03
COL4A6-206ENST00000477085 HSPG2P98160 4391 aa8.61□□□□□ -1.03
COL4A6-206ENST00000477085 Q6JHZ5 121 aa8.61□□□□□ -1.03
COL4A6-206ENST00000477085 Q8NBF4 154 aa8.59□□□□□ -1.03
COL4A6-206ENST00000477085 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
COL4A6-206ENST00000477085 KRTAP17-1Q9BYP8 105 aa8.57□□□□□ -1.04
COL4A6-206ENST00000477085 A0A087X002 238 aa8.56□□□□□ -1.04
COL4A6-206ENST00000477085 MOBPQ13875 183 aa8.56□□□□□ -1.04
COL4A6-206ENST00000477085 C9orf153Q5TBE3 101 aa8.56□□□□□ -1.04
COL4A6-206ENST00000477085 CRYGAP11844 174 aa8.56□□□□□ -1.04
COL4A6-206ENST00000477085 RYR1P21817 5038 aa8.55□□□□□ -1.04
COL4A6-206ENST00000477085 ANAPC13Q9BS18 74 aa8.55□□□□□ -1.04
COL4A6-206ENST00000477085 CDK2AP2O75956 126 aa8.54□□□□□ -1.04
COL4A6-206ENST00000477085 KRTAP13-2Q52LG2 175 aa8.54□□□□□ -1.04
COL4A6-206ENST00000477085 ATP5EP2Q5VTU8 51 aa8.54□□□□□ -1.04
COL4A6-206ENST00000477085 SPINK6Q6UWN8 80 aa8.54□□□□□ -1.04
COL4A6-206ENST00000477085 Q6ZVQ6 151 aa8.54□□□□□ -1.04
COL4A6-206ENST00000477085 IGKV3D-7A0A0C4DH55 119 aa8.53□□□□□ -1.04
COL4A6-206ENST00000477085 UBL5Q9BZL1 73 aa8.53□□□□□ -1.04
COL4A6-206ENST00000477085 FAM236AA0A1B0GUQ0 79 aa8.53□□□□□ -1.04
COL4A6-206ENST00000477085 FAM236BA0A1B0GV22 79 aa8.53□□□□□ -1.04
COL4A6-206ENST00000477085 KIAA1109Q2LD37 5005 aa8.52□□□□□ -1.05
COL4A6-206ENST00000477085 A0A1B0GW54 56 aa8.5□□□□□ -1.05
COL4A6-206ENST00000477085 FAM229BQ4G0N7 80 aa8.5□□□□□ -1.05
COL4A6-206ENST00000477085 A0A087WSZ3 146 aa8.49□□□□□ -1.05
COL4A6-206ENST00000477085 HIST1H4AP62805 103 aaKnown RBP8.49□□□□□ -1.05
COL4A6-206ENST00000477085 PKHD1L1Q86WI1 4243 aa8.49□□□□□ -1.05
COL4A6-206ENST00000477085 PLA2G1BP04054 148 aaKnown RBP8.48□□□□□ -1.05
COL4A6-206ENST00000477085 HRCT1Q6UXD1 115 aa8.48□□□□□ -1.05
COL4A6-206ENST00000477085 NREPQ16612 68 aa8.47□□□□□ -1.05
COL4A6-206ENST00000477085 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
COL4A6-206ENST00000477085 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
COL4A6-206ENST00000477085 A0A087WVE0 104 aa8.45□□□□□ -1.06
COL4A6-206ENST00000477085 Q5VSD8 79 aa8.45□□□□□ -1.06
COL4A6-206ENST00000477085 PRR26Q8N8Z3 221 aa8.43□□□□□ -1.06
COL4A6-206ENST00000477085 CXCL6P80162 114 aa8.42□□□□□ -1.06
COL4A6-206ENST00000477085 DEFB116Q30KQ4 102 aa8.41□□□□□ -1.06
COL4A6-206ENST00000477085 ATOX1O00244 68 aa8.4□□□□□ -1.07
COL4A6-206ENST00000477085 CCDC179H3BU77 68 aa8.39□□□□□ -1.07
COL4A6-206ENST00000477085 LINC00472Q9H8W2 130 aa8.39□□□□□ -1.07
COL4A6-206ENST00000477085 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
COL4A6-206ENST00000477085 BPY2O14599 106 aa8.38□□□□□ -1.07
COL4A6-206ENST00000477085 CD164Q04900 197 aa8.38□□□□□ -1.07
COL4A6-206ENST00000477085 Q8N9L7 120 aa8.38□□□□□ -1.07
COL4A6-206ENST00000477085 Q96NJ1 140 aa8.38□□□□□ -1.07
COL4A6-206ENST00000477085 DSCR10P59022 87 aa8.37□□□□□ -1.07
COL4A6-206ENST00000477085 Q8N1X5 172 aa8.36□□□□□ -1.07
COL4A6-206ENST00000477085 LRP1Q07954 4544 aaKnown RBP8.36□□□□□ -1.07
COL4A6-206ENST00000477085 IGKV4-1P06312 121 aa8.33□□□□□ -1.08
COL4A6-206ENST00000477085 COX7CP15954 63 aa8.32□□□□□ -1.08
COL4A6-206ENST00000477085 UQCRQO14949 82 aa8.31□□□□□ -1.08
COL4A6-206ENST00000477085 K7EQZ3 153 aa8.3□□□□□ -1.08
COL4A6-206ENST00000477085 SS18L2Q9UHA2 77 aa8.3□□□□□ -1.08
COL4A6-206ENST00000477085 TNXBP22105 4242 aa8.3□□□□□ -1.08
COL4A6-206ENST00000477085 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
COL4A6-206ENST00000477085 SERP2Q8N6R1 65 aa8.29□□□□□ -1.08
COL4A6-206ENST00000477085 KRTAP4-5Q9BYR2 181 aa8.29□□□□□ -1.08
COL4A6-206ENST00000477085 Q5XG85 94 aa8.28□□□□□ -1.08
COL4A6-206ENST00000477085 LINC00304Q8N9R0 145 aa8.27□□□□□ -1.08
COL4A6-206ENST00000477085 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.09
COL4A6-206ENST00000477085 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
COL4A6-206ENST00000477085 SPINK1P00995 79 aa8.25□□□□□ -1.09
COL4A6-206ENST00000477085 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
COL4A6-206ENST00000477085 MYCBP2O75592 4640 aa8.25□□□□□ -1.09
COL4A6-206ENST00000477085 A8MWP4 228 aa8.25□□□□□ -1.09
COL4A6-206ENST00000477085 J3KT08 172 aa8.24□□□□□ -1.09
COL4A6-206ENST00000477085 C1orf195Q5TG92 126 aa8.24□□□□□ -1.09
COL4A6-206ENST00000477085 BIRC6Q9NR09 4857 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms