RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 H0Y9J4 135 aa10.32□□□□□ -0.76
TMEM53-208ENST00000476724 IGLV8-61A0A075B6I0 122 aa10.32□□□□□ -0.76
TMEM53-208ENST00000476724 LRCOL1A6NCL2 159 aa10.32□□□□□ -0.76
TMEM53-208ENST00000476724 PRLHP81277 87 aa10.32□□□□□ -0.76
TMEM53-208ENST00000476724 LINC00476Q8WZB0 136 aa10.32□□□□□ -0.76
TMEM53-208ENST00000476724 DNAH2Q9P225 4427 aa10.31□□□□□ -0.76
TMEM53-208ENST00000476724 LINC00474Q9P2X8 69 aa10.31□□□□□ -0.76
TMEM53-208ENST00000476724 WWC2-AS2Q96NR7 200 aa10.3□□□□□ -0.76
TMEM53-208ENST00000476724 H7BZZ5 65 aa10.29□□□□□ -0.76
TMEM53-208ENST00000476724 NDUFC1O43677 76 aa10.29□□□□□ -0.76
TMEM53-208ENST00000476724 HIGD2AQ9BW72 106 aa10.29□□□□□ -0.76
TMEM53-208ENST00000476724 PHF5AQ7RTV0 110 aaKnown RBP10.28□□□□□ -0.76
TMEM53-208ENST00000476724 CHTF8P0CG12 524 aa10.27□□□□□ -0.76
TMEM53-208ENST00000476724 IGFL1Q6UW32 110 aa10.27□□□□□ -0.76
TMEM53-208ENST00000476724 Q6ZR54 194 aa10.27□□□□□ -0.76
TMEM53-208ENST00000476724 OCR1Q9BZK8 76 aa10.27□□□□□ -0.77
TMEM53-208ENST00000476724 LY6G6CO95867 125 aa10.26□□□□□ -0.77
TMEM53-208ENST00000476724 FAM236DA0A1B0GTK5 79 aa10.26□□□□□ -0.77
TMEM53-208ENST00000476724 FAM236CP0DP71 79 aa10.26□□□□□ -0.77
TMEM53-208ENST00000476724 SPRR1BP22528 89 aa10.26□□□□□ -0.77
TMEM53-208ENST00000476724 DNAH6Q9C0G6 4158 aa10.25□□□□□ -0.77
TMEM53-208ENST00000476724 SNURFQ9Y675 71 aa10.25□□□□□ -0.77
TMEM53-208ENST00000476724 EPM2AB3EWF7 344 aa10.24□□□□□ -0.77
TMEM53-208ENST00000476724 UBE2AP49459 152 aa10.24□□□□□ -0.77
TMEM53-208ENST00000476724 DSCR10P59022 87 aa10.24□□□□□ -0.77
TMEM53-208ENST00000476724 TMEM254Q8TBM7 123 aa10.24□□□□□ -0.77
TMEM53-208ENST00000476724 ALMS1Q8TCU4 4167 aa10.23□□□□□ -0.77
TMEM53-208ENST00000476724 KRTAP11-1Q8IUC1 163 aa10.22□□□□□ -0.77
TMEM53-208ENST00000476724 HYDINQ4G0P3 5121 aa10.21□□□□□ -0.78
TMEM53-208ENST00000476724 HECTD4Q9Y4D8 3996 aa10.2□□□□□ -0.78
TMEM53-208ENST00000476724 A0A087WTM6 91 aa10.19□□□□□ -0.78
TMEM53-208ENST00000476724 K7EQZ3 153 aa10.18□□□□□ -0.78
TMEM53-208ENST00000476724 ATP5EP56381 51 aaPredicted RBP10.18□□□□□ -0.78
TMEM53-208ENST00000476724 A0A0U1RQV1 116 aa10.17□□□□□ -0.78
TMEM53-208ENST00000476724 SVIPQ8NHG7 77 aa10.17□□□□□ -0.78
TMEM53-208ENST00000476724 SERP1Q9Y6X1 66 aa10.17□□□□□ -0.78
TMEM53-208ENST00000476724 DNAH17Q9UFH2 4485 aa10.17□□□□□ -0.78
TMEM53-208ENST00000476724 A0A087WSZ3 146 aa10.16□□□□□ -0.78
TMEM53-208ENST00000476724 A0A0G2JQZ4 141 aa10.16□□□□□ -0.78
TMEM53-208ENST00000476724 FRAS1Q86XX4 4008 aa10.16□□□□□ -0.78
TMEM53-208ENST00000476724 C1orf134Q5TEV5 83 aa10.15□□□□□ -0.78
TMEM53-208ENST00000476724 OXTP01178 125 aa10.14□□□□□ -0.79
TMEM53-208ENST00000476724 SPACA4Q8TDM5 124 aa10.14□□□□□ -0.79
TMEM53-208ENST00000476724 HCG22E2RYF7 251 aa10.14□□□□□ -0.79
TMEM53-208ENST00000476724 KRTAP13-1Q8IUC0 172 aa10.14□□□□□ -0.79
TMEM53-208ENST00000476724 LCE6AA0A183 80 aa10.13□□□□□ -0.79
TMEM53-208ENST00000476724 PANO1I0J062 215 aa10.13□□□□□ -0.79
TMEM53-208ENST00000476724 FAM30AQ9NZY2 134 aa10.13□□□□□ -0.79
TMEM53-208ENST00000476724 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.1□□□□□ -0.79
TMEM53-208ENST00000476724 RTL8CO15255 209 aa10.08□□□□□ -0.8
TMEM53-208ENST00000476724 C5orf47Q569G3 176 aa10.08□□□□□ -0.8
TMEM53-208ENST00000476724 DEFB116Q30KQ4 102 aa10.07□□□□□ -0.8
TMEM53-208ENST00000476724 DNAH11Q96DT5 4516 aa10.05□□□□□ -0.8
TMEM53-208ENST00000476724 RPL37AP61513 92 aaKnown RBP10.05□□□□□ -0.8
TMEM53-208ENST00000476724 LINC00472Q9H8W2 130 aa10.05□□□□□ -0.8
TMEM53-208ENST00000476724 DNAH5Q8TE73 4624 aa10.04□□□□□ -0.8
TMEM53-208ENST00000476724 SACSQ9NZJ4 4579 aa10.04□□□□□ -0.8
TMEM53-208ENST00000476724 FAT2Q9NYQ8 4349 aa10.03□□□□□ -0.8
TMEM53-208ENST00000476724 ZNF706Q9Y5V0 76 aaPredicted RBP10.03□□□□□ -0.8
TMEM53-208ENST00000476724 A8MWP4 228 aa10.02□□□□□ -0.81
TMEM53-208ENST00000476724 LINC00483Q53H64 154 aa10.02□□□□□ -0.81
TMEM53-208ENST00000476724 PRR15Q8IV56 129 aa10.02□□□□□ -0.81
TMEM53-208ENST00000476724 IGLV5-52A0A0A0MRZ9 124 aa10.02□□□□□ -0.81
TMEM53-208ENST00000476724 KRTAP29-1A8MX34 341 aaPredicted RBP10□□□□□ -0.81
TMEM53-208ENST00000476724 Q5XG85 94 aa10□□□□□ -0.81
TMEM53-208ENST00000476724 WFDC13Q8IUB5 93 aa10□□□□□ -0.81
TMEM53-208ENST00000476724 ZCCHC13Q8WW36 166 aaKnown RBP10□□□□□ -0.81
TMEM53-208ENST00000476724 PLAC8Q9NZF1 115 aa10□□□□□ -0.81
TMEM53-208ENST00000476724 SMIM26A0A096LP01 95 aa9.99□□□□□ -0.81
TMEM53-208ENST00000476724 DNAH8Q96JB1 4490 aa9.98□□□□□ -0.81
TMEM53-208ENST00000476724 KRTAP10-2P60368 255 aa9.98□□□□□ -0.81
TMEM53-208ENST00000476724 PKD1P98161 4303 aa9.97□□□□□ -0.81
TMEM53-208ENST00000476724 CASC2Q6XLA1 102 aa9.97□□□□□ -0.81
TMEM53-208ENST00000476724 PSORS1C2Q9UIG4 136 aa9.97□□□□□ -0.81
TMEM53-208ENST00000476724 IGLV9-49A0A0B4J1Y8 123 aa9.95□□□□□ -0.82
TMEM53-208ENST00000476724 MP68P56378 58 aa9.95□□□□□ -0.82
TMEM53-208ENST00000476724 ZNF861PO60384 105 aa9.94□□□□□ -0.82
TMEM53-208ENST00000476724 NDUFB1O75438 58 aa9.94□□□□□ -0.82
TMEM53-208ENST00000476724 C4orf26Q17RF5 130 aa9.93□□□□□ -0.82
TMEM53-208ENST00000476724 H3BPC8 53 aa9.92□□□□□ -0.82
TMEM53-208ENST00000476724 SRRM2Q9UQ35 2752 aaKnown RBP9.89□□□□□ -0.83
TMEM53-208ENST00000476724 Q96NJ1 140 aa9.88□□□□□ -0.83
TMEM53-208ENST00000476724 FP248Q71RG6 208 aaPredicted RBP9.87□□□□□ -0.83
TMEM53-208ENST00000476724 MMP24-AS1A0A0U1RRL7 71 aa9.87□□□□□ -0.83
TMEM53-208ENST00000476724 HRCT1Q6UXD1 115 aa9.86□□□□□ -0.83
TMEM53-208ENST00000476724 MOBPQ13875 183 aa9.86□□□□□ -0.83
TMEM53-208ENST00000476724 RYR2Q92736 4967 aa9.85□□□□□ -0.83
TMEM53-208ENST00000476724 TRAV22A0A0B4J277 110 aa9.84□□□□□ -0.83
TMEM53-208ENST00000476724 hDV103S1A0JD37 113 aa9.84□□□□□ -0.83
TMEM53-208ENST00000476724 H0Y9P7 68 aa9.84□□□□□ -0.83
TMEM53-208ENST00000476724 LINC00208Q96KT6 92 aa9.84□□□□□ -0.83
TMEM53-208ENST00000476724 CYP4F30PQ9H0H9 118 aa9.84□□□□□ -0.83
TMEM53-208ENST00000476724 KRTAP10-1P60331 282 aa9.84□□□□□ -0.83
TMEM53-208ENST00000476724 IGLV7-43P04211 117 aa9.83□□□□□ -0.84
TMEM53-208ENST00000476724 KMT2CQ8NEZ4 4911 aaKnown RBP9.82□□□□□ -0.84
TMEM53-208ENST00000476724 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
TMEM53-208ENST00000476724 CIRBP-AS1Q8TBR5 109 aa9.81□□□□□ -0.84
TMEM53-208ENST00000476724 TP53AIP1Q9HCN2 124 aa9.8□□□□□ -0.84
TMEM53-208ENST00000476724 CDK2AP2O75956 126 aa9.79□□□□□ -0.84
TMEM53-208ENST00000476724 FAM229BQ4G0N7 80 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms