RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 DOPEY1Q5JWR5 2465 aa2.44□□□□□ -2.02
CD55-208ENST00000476590 LY6EQ16553 131 aa2.44□□□□□ -2.02
CD55-208ENST00000476590 SSBP3-AS1Q7Z2R9 100 aa2.44□□□□□ -2.02
CD55-208ENST00000476590 CAMK2N1Q7Z7J9 78 aa2.44□□□□□ -2.02
CD55-208ENST00000476590 KRTAP11-1Q8IUC1 163 aa2.44□□□□□ -2.02
CD55-208ENST00000476590 C5orf42Q9H799 3197 aa2.44□□□□□ -2.02
CD55-208ENST00000476590 A0A0G2JQZ4 141 aa2.43□□□□□ -2.02
CD55-208ENST00000476590 A0A1W2PNN7 141 aa2.43□□□□□ -2.02
CD55-208ENST00000476590 Q96NJ1 140 aa2.43□□□□□ -2.02
CD55-208ENST00000476590 DMDP11532 3685 aa2.43□□□□□ -2.02
CD55-208ENST00000476590 MAP1BP46821 2468 aaKnown RBP2.43□□□□□ -2.02
CD55-208ENST00000476590 PTPRZ1P23471 2315 aaPredicted RBP2.43□□□□□ -2.02
CD55-208ENST00000476590 GIG44P09565 113 aaPredicted RBP2.43□□□□□ -2.02
CD55-208ENST00000476590 ZFHX2Q9C0A1 2572 aaPredicted RBP2.43□□□□□ -2.02
CD55-208ENST00000476590 CNOT1A5YKK6 2376 aaKnown RBP2.43□□□□□ -2.02
CD55-208ENST00000476590 DCHS1Q96JQ0 3298 aa2.43□□□□□ -2.02
CD55-208ENST00000476590 H3BUX3 64 aa2.42□□□□□ -2.02
CD55-208ENST00000476590 MRPL34Q9BQ48 92 aaKnown RBP2.42□□□□□ -2.02
CD55-208ENST00000476590 LAMA3Q16787 3333 aa2.42□□□□□ -2.02
CD55-208ENST00000476590 BRCA2P51587 3418 aa2.42□□□□□ -2.02
CD55-208ENST00000476590 LY6G6CO95867 125 aa2.42□□□□□ -2.02
CD55-208ENST00000476590 PRO0255Q9UI72 69 aa2.42□□□□□ -2.02
CD55-208ENST00000476590 ROS1P08922 2347 aa2.41□□□□□ -2.02
CD55-208ENST00000476590 TRIOBPQ9H2D6 2365 aa2.41□□□□□ -2.02
CD55-208ENST00000476590 WDFY3Q8IZQ1 3526 aa2.41□□□□□ -2.02
CD55-208ENST00000476590 CRIPTQ9P021 101 aa2.41□□□□□ -2.02
CD55-208ENST00000476590 FREM2Q5SZK8 3169 aa2.41□□□□□ -2.02
CD55-208ENST00000476590 AKAP6Q13023 2319 aa2.41□□□□□ -2.02
CD55-208ENST00000476590 COL6A6A6NMZ7 2263 aa2.4□□□□□ -2.02
CD55-208ENST00000476590 LAMA1P25391 3075 aa2.4□□□□□ -2.02
CD55-208ENST00000476590 A0A096LPF7 62 aa2.4□□□□□ -2.02
CD55-208ENST00000476590 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.02
CD55-208ENST00000476590 TPRP12270 2363 aaKnown RBP2.4□□□□□ -2.03
CD55-208ENST00000476590 NBDYA0A0U1RRE5 68 aa2.4□□□□□ -2.03
CD55-208ENST00000476590 PANO1I0J062 215 aa2.4□□□□□ -2.03
CD55-208ENST00000476590 SPEGQ15772 3267 aa2.4□□□□□ -2.03
CD55-208ENST00000476590 COL6A5A8TX70 2615 aa2.39□□□□□ -2.03
CD55-208ENST00000476590 H0YAA0 97 aa2.39□□□□□ -2.03
CD55-208ENST00000476590 C10orf99Q6UWK7 81 aa2.39□□□□□ -2.03
CD55-208ENST00000476590 PSORS1C2Q9UIG4 136 aa2.39□□□□□ -2.03
CD55-208ENST00000476590 DEFB130BP0DP73 79 aa2.39□□□□□ -2.03
CD55-208ENST00000476590 DEFB130AP0DP74 79 aa2.39□□□□□ -2.03
CD55-208ENST00000476590 KRTAP13-3Q3SY46 172 aa2.39□□□□□ -2.03
CD55-208ENST00000476590 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
CD55-208ENST00000476590 IGF2RP11717 2491 aa2.38□□□□□ -2.03
CD55-208ENST00000476590 ANAPC11Q9NYG5 84 aa2.38□□□□□ -2.03
CD55-208ENST00000476590 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.38□□□□□ -2.031e-8■□□□□ 9.1
CD55-208ENST00000476590 DSPP15924 2871 aaKnown RBP2.38□□□□□ -2.03
CD55-208ENST00000476590 FLNBO75369 2602 aaKnown RBP2.38□□□□□ -2.03
CD55-208ENST00000476590 AKAP13Q12802 2813 aa2.38□□□□□ -2.03
CD55-208ENST00000476590 LELP1Q5T871 98 aa2.37□□□□□ -2.03
CD55-208ENST00000476590 ACACAQ13085 2346 aa2.37□□□□□ -2.03
CD55-208ENST00000476590 Q6ZSA8 131 aa2.37□□□□□ -2.03
CD55-208ENST00000476590 HTTP42858 3142 aa2.37□□□□□ -2.03
CD55-208ENST00000476590 HECTD1Q9ULT8 2610 aa2.36□□□□□ -2.03
CD55-208ENST00000476590 KRTAP9-6A8MVA2 160 aa2.36□□□□□ -2.03
CD55-208ENST00000476590 K7EIL1 84 aa2.36□□□□□ -2.03
CD55-208ENST00000476590 SPRR1BP22528 89 aa2.36□□□□□ -2.03
CD55-208ENST00000476590 ANKRD11Q6UB99 2663 aaPredicted RBP2.36□□□□□ -2.03
CD55-208ENST00000476590 CDH23Q9H251 3354 aa2.35□□□□□ -2.03
CD55-208ENST00000476590 DMXL2Q8TDJ6 3036 aa2.35□□□□□ -2.03
CD55-208ENST00000476590 C2CD3Q4AC94 2353 aa2.35□□□□□ -2.03
CD55-208ENST00000476590 TPRXLQ17RH7 258 aa2.35□□□□□ -2.03
CD55-208ENST00000476590 ZFHX4Q86UP3 3567 aa2.35□□□□□ -2.03
CD55-208ENST00000476590 NCOR1O75376 2440 aa2.35□□□□□ -2.03
CD55-208ENST00000476590 TACC2O95359 2948 aa2.35□□□□□ -2.03
CD55-208ENST00000476590 CSMD1Q96PZ7 3565 aa2.35□□□□□ -2.03
CD55-208ENST00000476590 CHD9Q3L8U1 2897 aa2.35□□□□□ -2.03
CD55-208ENST00000476590 A0A1W2PPR1 153 aa2.34□□□□□ -2.03
CD55-208ENST00000476590 OTOGQ6ZRI0 2925 aa2.34□□□□□ -2.03
CD55-208ENST00000476590 BOD1L1Q8NFC6 3051 aa2.34□□□□□ -2.03
CD55-208ENST00000476590 SPTA1P02549 2419 aa2.34□□□□□ -2.03
CD55-208ENST00000476590 REV3LO60673 3130 aa2.34□□□□□ -2.03
CD55-208ENST00000476590 ZDBF2Q9HCK1 2354 aa2.34□□□□□ -2.03
CD55-208ENST00000476590 A0A1B0GU33 70 aa2.34□□□□□ -2.04
CD55-208ENST00000476590 C4orf3Q8WVX3 66 aa2.34□□□□□ -2.04
CD55-208ENST00000476590 ASH1LQ9NR48 2969 aaKnown RBP2.34□□□□□ -2.04
CD55-208ENST00000476590 BDP1A6H8Y1 2624 aa2.33□□□□□ -2.04
CD55-208ENST00000476590 SPENQ96T58 3664 aaKnown RBP2.33□□□□□ -2.04
CD55-208ENST00000476590 EP300Q09472 2414 aaPredicted RBP2.33□□□□□ -2.04
CD55-208ENST00000476590 KRTAP21-3Q3LHN1 58 aa2.33□□□□□ -2.04
CD55-208ENST00000476590 MUC6Q6W4X9 2439 aa2.33□□□□□ -2.04
CD55-208ENST00000476590 TENM2Q9NT68 2774 aa2.33□□□□□ -2.04
CD55-208ENST00000476590 IGKV2-30P06310 120 aa2.33□□□□□ -2.04
CD55-208ENST00000476590 TYMSOSQ8TAI1 123 aa2.33□□□□□ -2.04
CD55-208ENST00000476590 PIEZO2Q9H5I5 2752 aa2.32□□□□□ -2.04
CD55-208ENST00000476590 MAP1AP78559 2803 aaPredicted RBP2.32□□□□□ -2.04
CD55-208ENST00000476590 PRLHP81277 87 aa2.32□□□□□ -2.04
CD55-208ENST00000476590 H1FX-AS1Q4G0G2 97 aa2.32□□□□□ -2.04
CD55-208ENST00000476590 KRTAP7-1Q8IUC3 87 aa2.32□□□□□ -2.04
CD55-208ENST00000476590 ITPR1Q14643 2758 aa2.31□□□□□ -2.04
CD55-208ENST00000476590 SPTBN4Q9H254 2564 aa2.31□□□□□ -2.04
CD55-208ENST00000476590 NOTCH2Q04721 2471 aa2.31□□□□□ -2.04
CD55-208ENST00000476590 FASNP49327 2511 aaKnown RBP2.31□□□□□ -2.04
CD55-208ENST00000476590 GVINP1Q7Z2Y8 2422 aa2.31□□□□□ -2.04
CD55-208ENST00000476590 STAB1Q9NY15 2570 aa2.3□□□□□ -2.04
CD55-208ENST00000476590 IGKV2D-30A0A075B6S6 120 aa2.3□□□□□ -2.04
CD55-208ENST00000476590 JMJD1CQ15652 2540 aa2.3□□□□□ -2.04
CD55-208ENST00000476590 NOTCH3Q9UM47 2321 aa2.3□□□□□ -2.04
CD55-208ENST00000476590 CACNA1HO95180 2353 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms