RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	PCP2	Q8IVA1	136 aa		3.93	□□□□□ -1.78
HDAC9-223	ENST00000476135	LITAF	Q99732	161 aa		3.93	□□□□□ -1.78
HDAC9-223	ENST00000476135	SPANXD	Q9BXN6	97 aa		3.93	□□□□□ -1.78
HDAC9-223	ENST00000476135	SPANXC	Q9NY87	97 aa		3.93	□□□□□ -1.78
HDAC9-223	ENST00000476135	IFITM1	P13164	125 aa		3.92	□□□□□ -1.78
HDAC9-223	ENST00000476135	UBE2A	P49459	152 aa		3.92	□□□□□ -1.78
HDAC9-223	ENST00000476135	S100A7L2	Q5SY68	101 aa		3.92	□□□□□ -1.78
HDAC9-223	ENST00000476135	ADAMTSL4-AS1	Q5T5F5	129 aa		3.92	□□□□□ -1.78
HDAC9-223	ENST00000476135	LCE1E	Q5T753	118 aa		3.92	□□□□□ -1.78
HDAC9-223	ENST00000476135	KRTAP13-1	Q8IUC0	172 aa		3.92	□□□□□ -1.78
HDAC9-223	ENST00000476135		Q8NDZ9	215 aa		3.92	□□□□□ -1.78
HDAC9-223	ENST00000476135	LINC00308	Q8TCZ7	52 aa		3.92	□□□□□ -1.78
HDAC9-223	ENST00000476135	TMEM126A	Q9H061	195 aa		3.92	□□□□□ -1.78
HDAC9-223	ENST00000476135	COX8A	P10176	69 aa		3.91	□□□□□ -1.78
HDAC9-223	ENST00000476135	DDT	P30046	118 aa		3.91	□□□□□ -1.78
HDAC9-223	ENST00000476135	SPATA45	Q537H7	98 aa		3.91	□□□□□ -1.78
HDAC9-223	ENST00000476135	PCOTH	Q58A44	107 aa		3.91	□□□□□ -1.78
HDAC9-223	ENST00000476135	SOSTDC1	Q6X4U4	206 aa		3.91	□□□□□ -1.78
HDAC9-223	ENST00000476135	COX6B2	Q6YFQ2	88 aa		3.91	□□□□□ -1.78
HDAC9-223	ENST00000476135	C3orf22	Q8N5N4	141 aa		3.91	□□□□□ -1.78
HDAC9-223	ENST00000476135	TRBV10-3	A0A0K0K1G6	114 aa		3.9	□□□□□ -1.79
HDAC9-223	ENST00000476135	ETDC	A0A1B0GVM5	59 aa		3.9	□□□□□ -1.79
HDAC9-223	ENST00000476135		A0A1B0GWB2	263 aa		3.9	□□□□□ -1.79
HDAC9-223	ENST00000476135	DLEU1	O43261	78 aa		3.9	□□□□□ -1.79
HDAC9-223	ENST00000476135	FAM19A1	Q7Z5A9	133 aa		3.9	□□□□□ -1.79
HDAC9-223	ENST00000476135	LINC00846	Q9NV44	126 aa		3.9	□□□□□ -1.79
HDAC9-223	ENST00000476135	TRAV23DV6	A0A075B6W5	121 aa		3.89	□□□□□ -1.79
HDAC9-223	ENST00000476135	PYY3	Q5JQD4	70 aa		3.89	□□□□□ -1.79
HDAC9-223	ENST00000476135	SLC25A34	Q6PIV7	304 aa		3.89	□□□□□ -1.79
HDAC9-223	ENST00000476135	OR13C6P	Q8NH95	151 aa		3.89	□□□□□ -1.79
HDAC9-223	ENST00000476135	KCNQ1DN	Q9H478	68 aa		3.89	□□□□□ -1.79
HDAC9-223	ENST00000476135	SPINK1	P00995	79 aa		3.88	□□□□□ -1.79
HDAC9-223	ENST00000476135	IGLV6-57	P01721	117 aa		3.88	□□□□□ -1.79
HDAC9-223	ENST00000476135	HINT1	P49773	126 aa	Predicted RBP	3.88	□□□□□ -1.79
HDAC9-223	ENST00000476135	KRTAP20-1	Q3LI63	56 aa		3.88	□□□□□ -1.79
HDAC9-223	ENST00000476135	MUSTN1	Q8IVN3	82 aa		3.88	□□□□□ -1.79
HDAC9-223	ENST00000476135	C14orf144	Q96I85	54 aa		3.88	□□□□□ -1.79
HDAC9-223	ENST00000476135	HIST1H4G	Q99525	98 aa		3.88	□□□□□ -1.79
HDAC9-223	ENST00000476135	TRAV13-2	A0A0B4J235	113 aa		3.87	□□□□□ -1.79
HDAC9-223	ENST00000476135	SPRR1A	P35321	89 aa		3.87	□□□□□ -1.79
HDAC9-223	ENST00000476135	PRLH	P81277	87 aa		3.87	□□□□□ -1.79
HDAC9-223	ENST00000476135	HIGD1B	Q9P298	99 aa		3.87	□□□□□ -1.79
HDAC9-223	ENST00000476135	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.87	□□□□□ -1.79
HDAC9-223	ENST00000476135		A6NDN8	102 aa		3.86	□□□□□ -1.79
HDAC9-223	ENST00000476135	ZNF73	O43830	326 aa	Predicted RBP	3.86	□□□□□ -1.79
HDAC9-223	ENST00000476135	TAL2	Q16559	108 aa		3.86	□□□□□ -1.79
HDAC9-223	ENST00000476135	HIGD2A	Q9BW72	106 aa		3.86	□□□□□ -1.79
HDAC9-223	ENST00000476135	SMIM6	P0DI80	62 aa		3.85	□□□□□ -1.79
HDAC9-223	ENST00000476135		Q6ZRX8	168 aa		3.85	□□□□□ -1.79
HDAC9-223	ENST00000476135		Q8NBF4	154 aa		3.85	□□□□□ -1.79
HDAC9-223	ENST00000476135	RPS29	P62273	56 aa	Known RBP	3.84	□□□□□ -1.79
HDAC9-223	ENST00000476135	C2orf91	Q6ZV80	131 aa		3.84	□□□□□ -1.79
HDAC9-223	ENST00000476135		Q8N377	158 aa		3.84	□□□□□ -1.79
HDAC9-223	ENST00000476135	PRAC1	Q96KF2	57 aa		3.84	□□□□□ -1.79
HDAC9-223	ENST00000476135	UQCR10	Q9UDW1	63 aa		3.84	□□□□□ -1.79
HDAC9-223	ENST00000476135	NEB	P20929	6669 aa		3.84	□□□□□ -1.8
HDAC9-223	ENST00000476135	TRBV7-6	A0A0J9YX20	115 aa		3.83	□□□□□ -1.8
HDAC9-223	ENST00000476135	COX7B	P24311	80 aa		3.83	□□□□□ -1.8
HDAC9-223	ENST00000476135	C6orf99	Q4VX62	202 aa		3.83	□□□□□ -1.8
HDAC9-223	ENST00000476135	RAB37	Q96AX2	223 aa		3.83	□□□□□ -1.8
HDAC9-223	ENST00000476135	DHRS4-AS1	Q9P1J3	65 aa		3.83	□□□□□ -1.8
HDAC9-223	ENST00000476135	SLC25A20	O43772	301 aa		3.82	□□□□□ -1.8
HDAC9-223	ENST00000476135	ELOF1	P60002	83 aa	Known RBP	3.82	□□□□□ -1.8
HDAC9-223	ENST00000476135	HSD52	Q0P140	79 aa		3.82	□□□□□ -1.8
HDAC9-223	ENST00000476135	KRTAP19-6	Q3LI70	58 aa		3.82	□□□□□ -1.8
HDAC9-223	ENST00000476135	CEND1	Q8N111	149 aa		3.82	□□□□□ -1.8
HDAC9-223	ENST00000476135	SMCR5	Q8TEV8	140 aa		3.82	□□□□□ -1.8
HDAC9-223	ENST00000476135	SPRR4	Q96PI1	79 aa		3.82	□□□□□ -1.8
HDAC9-223	ENST00000476135	C12orf57	Q99622	126 aa		3.82	□□□□□ -1.8
HDAC9-223	ENST00000476135	OCR1	Q9BZK8	76 aa		3.82	□□□□□ -1.8
HDAC9-223	ENST00000476135	NHP2	Q9NX24	153 aa	Known RBP	3.82	□□□□□ -1.8
HDAC9-223	ENST00000476135		A0A0B4J2C4	111 aa		3.81	□□□□□ -1.8
HDAC9-223	ENST00000476135		Q9BRP9	147 aa		3.81	□□□□□ -1.8
HDAC9-223	ENST00000476135		Q1RN00	199 aa		3.8	□□□□□ -1.8
HDAC9-223	ENST00000476135	BVES-AS1	Q5T3Y7	98 aa		3.8	□□□□□ -1.8
HDAC9-223	ENST00000476135	SMIM11B	Q8TCY0	68 aa		3.8	□□□□□ -1.8
HDAC9-223	ENST00000476135	TSTD3	H0UI37	97 aa		3.79	□□□□□ -1.8
HDAC9-223	ENST00000476135	LINC00483	Q53H64	154 aa		3.79	□□□□□ -1.8
HDAC9-223	ENST00000476135	LOC105371267	A0A1B0GV96	52 aa		3.78	□□□□□ -1.8
HDAC9-223	ENST00000476135		H7C2G1	150 aa		3.78	□□□□□ -1.8
HDAC9-223	ENST00000476135	ERC2-IT1	O76042	136 aa		3.78	□□□□□ -1.8
HDAC9-223	ENST00000476135	SNCG	O76070	127 aa		3.78	□□□□□ -1.8
HDAC9-223	ENST00000476135	FXYD2	P54710	66 aa		3.78	□□□□□ -1.8
HDAC9-223	ENST00000476135	NDUFV3	P56181	108 aa	Known RBP	3.78	□□□□□ -1.8
HDAC9-223	ENST00000476135	PRO1933	Q9H354	126 aa		3.78	□□□□□ -1.8
HDAC9-223	ENST00000476135	PRO1854	Q9UHT4	67 aa		3.78	□□□□□ -1.8
HDAC9-223	ENST00000476135		M0R143	59 aa		3.77	□□□□□ -1.81
HDAC9-223	ENST00000476135	MT3	P25713	68 aa		3.77	□□□□□ -1.81
HDAC9-223	ENST00000476135	hADV29S1	A0JD25	119 aa		3.76	□□□□□ -1.81
HDAC9-223	ENST00000476135		H0YGX0	51 aa		3.76	□□□□□ -1.81
HDAC9-223	ENST00000476135	MT2A	P02795	61 aa		3.76	□□□□□ -1.81
HDAC9-223	ENST00000476135	LINC00575	Q6W349	94 aa		3.76	□□□□□ -1.81
HDAC9-223	ENST00000476135	ST20-AS1	Q8NBB2	130 aa		3.76	□□□□□ -1.81
HDAC9-223	ENST00000476135	LAMTOR3	Q9UHA4	124 aa		3.76	□□□□□ -1.81
HDAC9-223	ENST00000476135	TEX49	A0A1B0GTD5	131 aa		3.75	□□□□□ -1.81
HDAC9-223	ENST00000476135	C9orf92	A6NGG3	77 aa		3.75	□□□□□ -1.81
HDAC9-223	ENST00000476135	SPRR1B	P22528	89 aa		3.75	□□□□□ -1.81
HDAC9-223	ENST00000476135	MOBP	Q13875	183 aa		3.75	□□□□□ -1.81
HDAC9-223	ENST00000476135	C9orf153	Q5TBE3	101 aa		3.75	□□□□□ -1.81
HDAC9-223	ENST00000476135	SSBP3-AS1	Q7Z2R9	100 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms