RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 Q8NDZ9 215 aa7.68□□□□□ -1.18
U2AF1-209ENST00000475639 NBDYA0A0U1RRE5 68 aa7.67□□□□□ -1.18
U2AF1-209ENST00000475639 CHTF8P0CG12 524 aa7.66□□□□□ -1.18
U2AF1-209ENST00000475639 C8orf17Q9NRJ1 99 aa7.65□□□□□ -1.18
U2AF1-209ENST00000475639 OCR1Q9BZK8 76 aa7.65□□□□□ -1.18
U2AF1-209ENST00000475639 GVQW2A0A096LPI5 108 aaPredicted RBP7.64□□□□□ -1.19
U2AF1-209ENST00000475639 PRO3102Q9H379 93 aa7.64□□□□□ -1.19
U2AF1-209ENST00000475639 ZNF292O60281 2723 aa7.63□□□□□ -1.19
U2AF1-209ENST00000475639 IGLV5-48A0A075B6I7 105 aa7.62□□□□□ -1.19
U2AF1-209ENST00000475639 IGLV5-37A0A075B6J1 123 aa7.62□□□□□ -1.19
U2AF1-209ENST00000475639 STAB2Q8WWQ8 2551 aa7.6□□□□□ -1.19
U2AF1-209ENST00000475639 Q1T7F1 81 aa7.6□□□□□ -1.19
U2AF1-209ENST00000475639 ITPR1Q14643 2758 aa7.6□□□□□ -1.19
U2AF1-209ENST00000475639 A0A1B0GVX0 72 aa7.6□□□□□ -1.19
U2AF1-209ENST00000475639 DSCR10P59022 87 aa7.59□□□□□ -1.19
U2AF1-209ENST00000475639 RBM12B-AS1Q9P1G2 102 aa7.59□□□□□ -1.19
U2AF1-209ENST00000475639 A0A0D9SG42 100 aa7.58□□□□□ -1.2
U2AF1-209ENST00000475639 BAHCC1Q9P281 2608 aa7.58□□□□□ -1.2
U2AF1-209ENST00000475639 LINC00528Q8N1L1 170 aa7.58□□□□□ -1.2
U2AF1-209ENST00000475639 LINC00588Q9Y4M8 146 aa7.57□□□□□ -1.2
U2AF1-209ENST00000475639 CHD6Q8TD26 2715 aa7.57□□□□□ -1.2
U2AF1-209ENST00000475639 LINC00304Q8N9R0 145 aa7.57□□□□□ -1.2
U2AF1-209ENST00000475639 KCNQ1DNQ9H478 68 aa7.57□□□□□ -1.2
U2AF1-209ENST00000475639 CR1P17927 2039 aa7.57□□□□□ -1.2
U2AF1-209ENST00000475639 IGFL1Q6UW32 110 aa7.56□□□□□ -1.2
U2AF1-209ENST00000475639 ANKRD17O75179 2603 aaKnown RBP7.56□□□□□ -1.2
U2AF1-209ENST00000475639 LINC00612Q8N6U2 182 aa7.55□□□□□ -1.2
U2AF1-209ENST00000475639 CSNK1G2-AS1Q8NCQ2 148 aa7.55□□□□□ -1.2
U2AF1-209ENST00000475639 MXRA5Q9NR99 2828 aa7.55□□□□□ -1.2
U2AF1-209ENST00000475639 NIPBLQ6KC79 2804 aaeCLIP7.55□□□□□ -1.2
U2AF1-209ENST00000475639 IGLV1-50A0A075B6I6 118 aa7.54□□□□□ -1.2
U2AF1-209ENST00000475639 A8MU10 97 aa7.54□□□□□ -1.2
U2AF1-209ENST00000475639 DNAH10OSP0CZ25 163 aa7.54□□□□□ -1.2
U2AF1-209ENST00000475639 ZANQ9Y493 2812 aa7.53□□□□□ -1.2
U2AF1-209ENST00000475639 A0A0A0MQY5 61 aa7.53□□□□□ -1.2
U2AF1-209ENST00000475639 ZNF861PO60384 105 aa7.53□□□□□ -1.2
U2AF1-209ENST00000475639 CAMK2N1Q7Z7J9 78 aa7.52□□□□□ -1.21
U2AF1-209ENST00000475639 SPANXA2-OT1Q8N9U9 137 aa7.52□□□□□ -1.21
U2AF1-209ENST00000475639 WWC2-AS2Q96NR7 200 aa7.52□□□□□ -1.21
U2AF1-209ENST00000475639 LINC00483Q53H64 154 aa7.51□□□□□ -1.21
U2AF1-209ENST00000475639 SETXQ7Z333 2677 aaKnown RBP7.51□□□□□ -1.21
U2AF1-209ENST00000475639 Q8NAQ8 132 aa7.51□□□□□ -1.21
U2AF1-209ENST00000475639 APCP25054 2843 aa7.5□□□□□ -1.21
U2AF1-209ENST00000475639 LCE6AA0A183 80 aa7.5□□□□□ -1.21
U2AF1-209ENST00000475639 FAM168BA1KXE4 195 aa7.49□□□□□ -1.21
U2AF1-209ENST00000475639 C9orf92A6NGG3 77 aa7.49□□□□□ -1.21
U2AF1-209ENST00000475639 GIG44P09565 113 aaPredicted RBP7.49□□□□□ -1.21
U2AF1-209ENST00000475639 Q8N377 158 aa7.48□□□□□ -1.21
U2AF1-209ENST00000475639 FBN2P35556 2912 aa7.48□□□□□ -1.21
U2AF1-209ENST00000475639 ZCCHC13Q8WW36 166 aaKnown RBP7.48□□□□□ -1.21
U2AF1-209ENST00000475639 Q8N1X5 172 aa7.45□□□□□ -1.22
U2AF1-209ENST00000475639 PRR26Q8N8Z3 221 aa7.45□□□□□ -1.22
U2AF1-209ENST00000475639 C15orf56Q8N910 161 aa7.45□□□□□ -1.22
U2AF1-209ENST00000475639 Q5VV11 94 aa7.44□□□□□ -1.22
U2AF1-209ENST00000475639 C9orf163Q8N9P6 203 aa7.44□□□□□ -1.22
U2AF1-209ENST00000475639 NBEAL2Q6ZNJ1 2754 aa7.43□□□□□ -1.22
U2AF1-209ENST00000475639 A0A1B0GU33 70 aa7.41□□□□□ -1.22
U2AF1-209ENST00000475639 KRTAP24-1Q3LI83 254 aa7.41□□□□□ -1.22
U2AF1-209ENST00000475639 UTP20O75691 2785 aaKnown RBP7.4□□□□□ -1.23
U2AF1-209ENST00000475639 PRR34Q9NV39 138 aa7.4□□□□□ -1.23
U2AF1-209ENST00000475639 A0A0G2JQZ4 141 aa7.38□□□□□ -1.23
U2AF1-209ENST00000475639 A0A1W2PNN7 141 aa7.38□□□□□ -1.23
U2AF1-209ENST00000475639 ITPR3Q14573 2671 aa7.38□□□□□ -1.23
U2AF1-209ENST00000475639 A0A1W2PNM2 257 aa7.37□□□□□ -1.23
U2AF1-209ENST00000475639 CFAP46Q8IYW2 2715 aa7.37□□□□□ -1.23
U2AF1-209ENST00000475639 IGLV7-43P04211 117 aa7.36□□□□□ -1.23
U2AF1-209ENST00000475639 PLA2G2DQ9UNK4 145 aa7.36□□□□□ -1.23
U2AF1-209ENST00000475639 NF1P21359 2839 aa7.36□□□□□ -1.23
U2AF1-209ENST00000475639 GCN1Q92616 2671 aaKnown RBP7.36□□□□□ -1.23
U2AF1-209ENST00000475639 H3BS24 57 aa7.35□□□□□ -1.23
U2AF1-209ENST00000475639 TLX1NBP0CAT3 122 aa7.35□□□□□ -1.23
U2AF1-209ENST00000475639 SMR3BP02814 79 aaPredicted RBP7.35□□□□□ -1.23
U2AF1-209ENST00000475639 SPRR4Q96PI1 79 aa7.35□□□□□ -1.23
U2AF1-209ENST00000475639 TEX15Q9BXT5 2789 aa7.35□□□□□ -1.23
U2AF1-209ENST00000475639 A0A087WTM6 91 aa7.35□□□□□ -1.23
U2AF1-209ENST00000475639 ANAPC11Q9NYG5 84 aa7.35□□□□□ -1.23
U2AF1-209ENST00000475639 Q6ZSA8 131 aa7.34□□□□□ -1.23
U2AF1-209ENST00000475639 NOTCH1P46531 2555 aa7.34□□□□□ -1.24
U2AF1-209ENST00000475639 Q8N9P0 234 aaPredicted RBP7.33□□□□□ -1.24
U2AF1-209ENST00000475639 COL6A5A8TX70 2615 aa7.33□□□□□ -1.24
U2AF1-209ENST00000475639 DMAC1Q96GE9 116 aa7.33□□□□□ -1.24
U2AF1-209ENST00000475639 NBEAL1Q6ZS30 2694 aa7.33□□□□□ -1.24
U2AF1-209ENST00000475639 PSORS1C2Q9UIG4 136 aa7.33□□□□□ -1.24
U2AF1-209ENST00000475639 C19orf73Q9NVV2 129 aa7.32□□□□□ -1.24
U2AF1-209ENST00000475639 A6NN06 94 aa7.3□□□□□ -1.24
U2AF1-209ENST00000475639 IGLV7-46A0A075B6I9 117 aa7.28□□□□□ -1.24
U2AF1-209ENST00000475639 CSAG1Q6PB30 78 aa7.27□□□□□ -1.25
U2AF1-209ENST00000475639 M0R2T5 61 aa7.27□□□□□ -1.25
U2AF1-209ENST00000475639 Q75L30 129 aa7.27□□□□□ -1.25
U2AF1-209ENST00000475639 UNC79Q9P2D8 2635 aa7.26□□□□□ -1.25
U2AF1-209ENST00000475639 HRES1P13985 223 aa7.25□□□□□ -1.25
U2AF1-209ENST00000475639 SPINK7P58062 85 aa7.25□□□□□ -1.25
U2AF1-209ENST00000475639 OTOGQ6ZRI0 2925 aa7.25□□□□□ -1.25
U2AF1-209ENST00000475639 TNP2Q05952 138 aa7.25□□□□□ -1.25
U2AF1-209ENST00000475639 FLNCQ14315 2725 aa7.24□□□□□ -1.25
U2AF1-209ENST00000475639 ZNF469Q96JG9 3925 aaPredicted RBP7.24□□□□□ -1.25
U2AF1-209ENST00000475639 CENPEQ02224 2701 aa7.24□□□□□ -1.25
U2AF1-209ENST00000475639 CNBPP62633 177 aaKnown RBP7.23□□□□□ -1.25
U2AF1-209ENST00000475639 LINC01558Q9Y6Z2 57 aa7.23□□□□□ -1.25
U2AF1-209ENST00000475639 K7EIL1 84 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms