RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 SERP2Q8N6R1 65 aa9.55□□□□□ -0.88
RPUSD3-215ENST00000475470 BCE1O60756 84 aa9.54□□□□□ -0.88
RPUSD3-215ENST00000475470 C3orf84H3BNL1 204 aa9.54□□□□□ -0.88
RPUSD3-215ENST00000475470 CXCL6P80162 114 aa9.52□□□□□ -0.89
RPUSD3-215ENST00000475470 A0A1W2PNM2 257 aa9.52□□□□□ -0.89
RPUSD3-215ENST00000475470 NREPQ16612 68 aa9.52□□□□□ -0.89
RPUSD3-215ENST00000475470 DNAH2Q9P225 4427 aa9.51□□□□□ -0.89
RPUSD3-215ENST00000475470 A0A1B0GW54 56 aa9.51□□□□□ -0.89
RPUSD3-215ENST00000475470 Q8NBF4 154 aa9.5□□□□□ -0.89
RPUSD3-215ENST00000475470 HECTD4Q9Y4D8 3996 aa9.49□□□□□ -0.89
RPUSD3-215ENST00000475470 SCXQ7RTU7 201 aa9.49□□□□□ -0.89
RPUSD3-215ENST00000475470 PLAC8Q9NZF1 115 aa9.48□□□□□ -0.89
RPUSD3-215ENST00000475470 KRTAP13-1Q8IUC0 172 aa9.48□□□□□ -0.89
RPUSD3-215ENST00000475470 SPRR1BP22528 89 aa9.47□□□□□ -0.89
RPUSD3-215ENST00000475470 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
RPUSD3-215ENST00000475470 IGFL1Q6UW32 110 aa9.46□□□□□ -0.9
RPUSD3-215ENST00000475470 IGLV8-61A0A075B6I0 122 aa9.45□□□□□ -0.9
RPUSD3-215ENST00000475470 A0A0G2JQZ4 141 aa9.44□□□□□ -0.9
RPUSD3-215ENST00000475470 DNAH17Q9UFH2 4485 aa9.44□□□□□ -0.9
RPUSD3-215ENST00000475470 PSORS1C2Q9UIG4 136 aa9.44□□□□□ -0.9
RPUSD3-215ENST00000475470 BPY2O14599 106 aa9.43□□□□□ -0.9
RPUSD3-215ENST00000475470 DNAH6Q9C0G6 4158 aa9.43□□□□□ -0.9
RPUSD3-215ENST00000475470 KRTAP10-2P60368 255 aa9.41□□□□□ -0.9
RPUSD3-215ENST00000475470 ALMS1Q8TCU4 4167 aa9.39□□□□□ -0.91
RPUSD3-215ENST00000475470 SRRM2Q9UQ35 2752 aaKnown RBP9.39□□□□□ -0.91
RPUSD3-215ENST00000475470 J3KT08 172 aa9.39□□□□□ -0.91
RPUSD3-215ENST00000475470 TMEM258P61165 79 aa9.39□□□□□ -0.91
RPUSD3-215ENST00000475470 C20orf197Q8N268 126 aa9.39□□□□□ -0.91
RPUSD3-215ENST00000475470 Q8N9L7 120 aa9.38□□□□□ -0.91
RPUSD3-215ENST00000475470 ZNF706Q9Y5V0 76 aaPredicted RBP9.36□□□□□ -0.91
RPUSD3-215ENST00000475470 ZNF861PO60384 105 aa9.35□□□□□ -0.91
RPUSD3-215ENST00000475470 IGKV4-1P06312 121 aa9.35□□□□□ -0.91
RPUSD3-215ENST00000475470 A0A087WSZ3 146 aa9.35□□□□□ -0.91
RPUSD3-215ENST00000475470 FAM30AQ9NZY2 134 aa9.35□□□□□ -0.91
RPUSD3-215ENST00000475470 TRAV7A0A075B6U4 112 aa9.34□□□□□ -0.91
RPUSD3-215ENST00000475470 FRAS1Q86XX4 4008 aa9.34□□□□□ -0.92
RPUSD3-215ENST00000475470 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
RPUSD3-215ENST00000475470 LINC00483Q53H64 154 aa9.33□□□□□ -0.92
RPUSD3-215ENST00000475470 HYDINQ4G0P3 5121 aa9.33□□□□□ -0.92
RPUSD3-215ENST00000475470 IGLV9-49A0A0B4J1Y8 123 aa9.32□□□□□ -0.92
RPUSD3-215ENST00000475470 RPS28P62857 69 aaKnown RBP9.31□□□□□ -0.92
RPUSD3-215ENST00000475470 OXTP01178 125 aa9.3□□□□□ -0.92
RPUSD3-215ENST00000475470 IGLV7-43P04211 117 aa9.3□□□□□ -0.92
RPUSD3-215ENST00000475470 DNAH8Q96JB1 4490 aa9.3□□□□□ -0.92
RPUSD3-215ENST00000475470 KRTAP10-1P60331 282 aa9.3□□□□□ -0.92
RPUSD3-215ENST00000475470 SNURFQ9Y675 71 aa9.3□□□□□ -0.92
RPUSD3-215ENST00000475470 DSCR10P59022 87 aa9.29□□□□□ -0.92
RPUSD3-215ENST00000475470 Q6ZSA8 131 aa9.27□□□□□ -0.92
RPUSD3-215ENST00000475470 DEFB116Q30KQ4 102 aa9.27□□□□□ -0.93
RPUSD3-215ENST00000475470 DNAH11Q96DT5 4516 aa9.27□□□□□ -0.93
RPUSD3-215ENST00000475470 DNAH5Q8TE73 4624 aa9.26□□□□□ -0.93
RPUSD3-215ENST00000475470 ANAPC11Q9NYG5 84 aa9.26□□□□□ -0.93
RPUSD3-215ENST00000475470 K7EQZ3 153 aa9.25□□□□□ -0.93
RPUSD3-215ENST00000475470 RPL37AP61513 92 aaKnown RBP9.25□□□□□ -0.93
RPUSD3-215ENST00000475470 H7BZZ5 65 aa9.24□□□□□ -0.93
RPUSD3-215ENST00000475470 MOBPQ13875 183 aa9.24□□□□□ -0.93
RPUSD3-215ENST00000475470 FAM236DA0A1B0GTK5 79 aa9.23□□□□□ -0.93
RPUSD3-215ENST00000475470 FAM236CP0DP71 79 aa9.23□□□□□ -0.93
RPUSD3-215ENST00000475470 KLKP1Q107X0 134 aa9.22□□□□□ -0.93
RPUSD3-215ENST00000475470 PKD1P98161 4303 aa9.21□□□□□ -0.93
RPUSD3-215ENST00000475470 FAT2Q9NYQ8 4349 aa9.21□□□□□ -0.94
RPUSD3-215ENST00000475470 HRCT1Q6UXD1 115 aa9.2□□□□□ -0.94
RPUSD3-215ENST00000475470 LCE6AA0A183 80 aa9.2□□□□□ -0.94
RPUSD3-215ENST00000475470 LINC00472Q9H8W2 130 aa9.19□□□□□ -0.94
RPUSD3-215ENST00000475470 HCG22E2RYF7 251 aa9.16□□□□□ -0.94
RPUSD3-215ENST00000475470 OCR1Q9BZK8 76 aa9.16□□□□□ -0.94
RPUSD3-215ENST00000475470 LINC00336Q6ZUF6 198 aa9.15□□□□□ -0.94
RPUSD3-215ENST00000475470 TMEM254Q8TBM7 123 aa9.14□□□□□ -0.95
RPUSD3-215ENST00000475470 A8MWP4 228 aa9.14□□□□□ -0.95
RPUSD3-215ENST00000475470 C4orf26Q17RF5 130 aa9.14□□□□□ -0.95
RPUSD3-215ENST00000475470 Q5XG85 94 aa9.12□□□□□ -0.95
RPUSD3-215ENST00000475470 PRR15Q8IV56 129 aa9.12□□□□□ -0.95
RPUSD3-215ENST00000475470 SERP1Q9Y6X1 66 aa9.12□□□□□ -0.95
RPUSD3-215ENST00000475470 SACSQ9NZJ4 4579 aa9.11□□□□□ -0.95
RPUSD3-215ENST00000475470 WFDC13Q8IUB5 93 aa9.11□□□□□ -0.95
RPUSD3-215ENST00000475470 Q96NJ1 140 aa9.1□□□□□ -0.95
RPUSD3-215ENST00000475470 NDUFC1O43677 76 aa9.09□□□□□ -0.96
RPUSD3-215ENST00000475470 NDUFB1O75438 58 aa9.09□□□□□ -0.96
RPUSD3-215ENST00000475470 SSBP3-AS1Q7Z2R9 100 aa9.09□□□□□ -0.96
RPUSD3-215ENST00000475470 A0A0U1RQV1 116 aa9.06□□□□□ -0.96
RPUSD3-215ENST00000475470 C5orf47Q569G3 176 aa9.06□□□□□ -0.96
RPUSD3-215ENST00000475470 LRP1BQ9NZR2 4599 aa9.06□□□□□ -0.96
RPUSD3-215ENST00000475470 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
RPUSD3-215ENST00000475470 KRTAP29-1A8MX34 341 aaPredicted RBP9.04□□□□□ -0.96
RPUSD3-215ENST00000475470 CD164Q04900 197 aa9.04□□□□□ -0.96
RPUSD3-215ENST00000475470 A0A087X002 238 aa9.04□□□□□ -0.96
RPUSD3-215ENST00000475470 FAM229BQ4G0N7 80 aa9.03□□□□□ -0.96
RPUSD3-215ENST00000475470 A0A1B0GVY2 172 aa9.02□□□□□ -0.97
RPUSD3-215ENST00000475470 CDK2AP2O75956 126 aa9.02□□□□□ -0.97
RPUSD3-215ENST00000475470 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
RPUSD3-215ENST00000475470 MMP24-AS1A0A0U1RRL7 71 aa9□□□□□ -0.97
RPUSD3-215ENST00000475470 ATP5EP56381 51 aaPredicted RBP9□□□□□ -0.97
RPUSD3-215ENST00000475470 KRTAP1-4P0C5Y4 121 aa8.99□□□□□ -0.97
RPUSD3-215ENST00000475470 PKHD1P08F94 4074 aa8.99□□□□□ -0.97
RPUSD3-215ENST00000475470 A0A1B0GVX0 72 aa8.98□□□□□ -0.97
RPUSD3-215ENST00000475470 hDV103S1A0JD37 113 aa8.98□□□□□ -0.97
RPUSD3-215ENST00000475470 IGHV6-1A0A0B4J1U7 121 aa8.97□□□□□ -0.97
RPUSD3-215ENST00000475470 SPINK6Q6UWN8 80 aa8.97□□□□□ -0.97
RPUSD3-215ENST00000475470 FP248Q71RG6 208 aaPredicted RBP8.97□□□□□ -0.97
RPUSD3-215ENST00000475470 VPS13BQ7Z7G8 4022 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms