RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 LINC00474Q9P2X8 69 aa4.46□□□□□ -1.7
LSAMP-204ENST00000475403 TRBV10-1A0A0K0K1A3 114 aa4.45□□□□□ -1.7
LSAMP-204ENST00000475403 A0A0U1RQV1 116 aa4.45□□□□□ -1.7
LSAMP-204ENST00000475403 PRYO14603 147 aa4.45□□□□□ -1.7
LSAMP-204ENST00000475403 TMEM254Q8TBM7 123 aa4.45□□□□□ -1.7
LSAMP-204ENST00000475403 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
LSAMP-204ENST00000475403 MT1HL1P0DM35 61 aa4.44□□□□□ -1.7
LSAMP-204ENST00000475403 NREPQ16612 68 aa4.44□□□□□ -1.7
LSAMP-204ENST00000475403 LINC01556Q5JQF7 62 aa4.44□□□□□ -1.7
LSAMP-204ENST00000475403 Q6ZVQ6 151 aa4.44□□□□□ -1.7
LSAMP-204ENST00000475403 SNURFQ9Y675 71 aa4.44□□□□□ -1.7
LSAMP-204ENST00000475403 TNXBP22105 4242 aa4.44□□□□□ -1.7
LSAMP-204ENST00000475403 A0A0U1RRA0 63 aa4.43□□□□□ -1.7
LSAMP-204ENST00000475403 CDC42SE2Q9NRR3 84 aa4.43□□□□□ -1.7
LSAMP-204ENST00000475403 A0A087WZ39 114 aa4.42□□□□□ -1.7
LSAMP-204ENST00000475403 LCE2BO14633 110 aa4.42□□□□□ -1.7
LSAMP-204ENST00000475403 C4orf48Q5BLP8 95 aa4.42□□□□□ -1.7
LSAMP-204ENST00000475403 Q8N3U1 123 aa4.42□□□□□ -1.7
LSAMP-204ENST00000475403 hDV103S1A0JD37 113 aa4.41□□□□□ -1.7
LSAMP-204ENST00000475403 LINC00158P58513 81 aa4.41□□□□□ -1.7
LSAMP-204ENST00000475403 FAM229BQ4G0N7 80 aa4.41□□□□□ -1.7
LSAMP-204ENST00000475403 NTM-AS1Q6ZSK4 140 aa4.41□□□□□ -1.7
LSAMP-204ENST00000475403 SLPIP03973 132 aa4.4□□□□□ -1.71
LSAMP-204ENST00000475403 OCR1Q9BZK8 76 aa4.4□□□□□ -1.71
LSAMP-204ENST00000475403 COX17Q14061 63 aa4.39□□□□□ -1.71
LSAMP-204ENST00000475403 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
LSAMP-204ENST00000475403 LINC00575Q6W349 94 aa4.39□□□□□ -1.71
LSAMP-204ENST00000475403 CYP4F30PQ9H0H9 118 aa4.39□□□□□ -1.71
LSAMP-204ENST00000475403 IGHV3OR16-9A0A0B4J2B5 98 aa4.38□□□□□ -1.71
LSAMP-204ENST00000475403 LOC100131303A0A0U1RQF7 123 aa4.38□□□□□ -1.71
LSAMP-204ENST00000475403 BPY2O14599 106 aa4.38□□□□□ -1.71
LSAMP-204ENST00000475403 MRPL55Q7Z7F7 128 aaKnown RBP4.38□□□□□ -1.71
LSAMP-204ENST00000475403 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
LSAMP-204ENST00000475403 Q8IZM0 81 aa4.38□□□□□ -1.71
LSAMP-204ENST00000475403 MPLKIPQ8TAP9 179 aa4.38□□□□□ -1.71
LSAMP-204ENST00000475403 IGKV2D-24A0A075B6R9 120 aa4.37□□□□□ -1.71
LSAMP-204ENST00000475403 IGHV3-73A0A0B4J1V6 119 aa4.37□□□□□ -1.71
LSAMP-204ENST00000475403 A0A1B0GW54 56 aa4.37□□□□□ -1.71
LSAMP-204ENST00000475403 UBE2L6O14933 153 aa4.37□□□□□ -1.71
LSAMP-204ENST00000475403 UBE2BP63146 152 aa4.37□□□□□ -1.71
LSAMP-204ENST00000475403 C14orf177Q52M58 125 aa4.37□□□□□ -1.71
LSAMP-204ENST00000475403 LELP1Q5T871 98 aa4.37□□□□□ -1.71
LSAMP-204ENST00000475403 NDUFS5O43920 106 aa4.36□□□□□ -1.71
LSAMP-204ENST00000475403 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.36□□□□□ -1.71
LSAMP-204ENST00000475403 COX7BP24311 80 aa4.35□□□□□ -1.71
LSAMP-204ENST00000475403 Q6ZRP5 223 aa4.35□□□□□ -1.71
LSAMP-204ENST00000475403 Q9UF83 564 aa4.35□□□□□ -1.71
LSAMP-204ENST00000475403 IGKV4-1P06312 121 aa4.34□□□□□ -1.71
LSAMP-204ENST00000475403 ZCCHC13Q8WW36 166 aaKnown RBP4.34□□□□□ -1.71
LSAMP-204ENST00000475403 TOMM7Q9P0U1 55 aa4.34□□□□□ -1.71
LSAMP-204ENST00000475403 UBE2AP49459 152 aa4.33□□□□□ -1.72
LSAMP-204ENST00000475403 C6orf99Q4VX62 202 aa4.33□□□□□ -1.72
LSAMP-204ENST00000475403 CD164L2Q6UWJ8 174 aa4.33□□□□□ -1.72
LSAMP-204ENST00000475403 C7orf33Q8WU49 177 aa4.33□□□□□ -1.72
LSAMP-204ENST00000475403 NDUFB1O75438 58 aa4.32□□□□□ -1.72
LSAMP-204ENST00000475403 VPREB1P12018 145 aa4.32□□□□□ -1.72
LSAMP-204ENST00000475403 ELOF1P60002 83 aaKnown RBP4.32□□□□□ -1.72
LSAMP-204ENST00000475403 PHF5AQ7RTV0 110 aaKnown RBP4.32□□□□□ -1.72
LSAMP-204ENST00000475403 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.32□□□□□ -1.72
LSAMP-204ENST00000475403 TRBV6-8A0A0A6YYG3 113 aa4.31□□□□□ -1.72
LSAMP-204ENST00000475403 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
LSAMP-204ENST00000475403 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
LSAMP-204ENST00000475403 REG3GQ6UW15 175 aa4.31□□□□□ -1.72
LSAMP-204ENST00000475403 C1orf64Q8NEQ6 169 aa4.31□□□□□ -1.72
LSAMP-204ENST00000475403 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
LSAMP-204ENST00000475403 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
LSAMP-204ENST00000475403 LPAP08519 4548 aa4.3□□□□□ -1.72
LSAMP-204ENST00000475403 LINC00959A0A1B0GUT2 108 aa4.3□□□□□ -1.72
LSAMP-204ENST00000475403 IGLV6-57P01721 117 aa4.3□□□□□ -1.72
LSAMP-204ENST00000475403 LCE2AQ5TA79 106 aaPredicted RBP4.3□□□□□ -1.72
LSAMP-204ENST00000475403 LIMD2Q9BT23 127 aa4.3□□□□□ -1.72
LSAMP-204ENST00000475403 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
LSAMP-204ENST00000475403 SYCNQ0VAF6 134 aa4.29□□□□□ -1.72
LSAMP-204ENST00000475403 ATP11AUNQ6ZP68 121 aa4.29□□□□□ -1.72
LSAMP-204ENST00000475403 Q6ZQY7 126 aa4.29□□□□□ -1.72
LSAMP-204ENST00000475403 Q9BRP9 147 aa4.29□□□□□ -1.72
LSAMP-204ENST00000475403 HIGD2AQ9BW72 106 aa4.29□□□□□ -1.72
LSAMP-204ENST00000475403 RBM12B-AS1Q9P1G2 102 aa4.29□□□□□ -1.72
LSAMP-204ENST00000475403 MUC2Q02817 5179 aa4.29□□□□□ -1.72
LSAMP-204ENST00000475403 Q5VV11 94 aa4.28□□□□□ -1.72
LSAMP-204ENST00000475403 C9orf163Q8N9P6 203 aa4.28□□□□□ -1.72
LSAMP-204ENST00000475403 SPANXA2-OT1Q8N9U9 137 aa4.28□□□□□ -1.72
LSAMP-204ENST00000475403 DIRC1Q969H9 104 aa4.28□□□□□ -1.72
LSAMP-204ENST00000475403 PANO1I0J062 215 aa4.27□□□□□ -1.73
LSAMP-204ENST00000475403 M0R378 163 aa4.27□□□□□ -1.73
LSAMP-204ENST00000475403 KIAA0087Q14695 138 aa4.27□□□□□ -1.73
LSAMP-204ENST00000475403 IGLV4-60A0A075B6I1 120 aa4.26□□□□□ -1.73
LSAMP-204ENST00000475403 ETDCA0A1B0GVM5 59 aa4.26□□□□□ -1.73
LSAMP-204ENST00000475403 H3BPC8 53 aa4.26□□□□□ -1.73
LSAMP-204ENST00000475403 PRR3P79522 188 aaKnown RBP4.26□□□□□ -1.73
LSAMP-204ENST00000475403 Q75L30 129 aa4.26□□□□□ -1.73
LSAMP-204ENST00000475403 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
LSAMP-204ENST00000475403 GVQW2A0A096LPI5 108 aaPredicted RBP4.25□□□□□ -1.73
LSAMP-204ENST00000475403 LOC101927531A0A1B0GV80 90 aa4.25□□□□□ -1.73
LSAMP-204ENST00000475403 A6NN06 94 aa4.25□□□□□ -1.73
LSAMP-204ENST00000475403 KRTAP10-8P60410 259 aa4.25□□□□□ -1.73
LSAMP-204ENST00000475403 HIGD2BQ4VC39 106 aa4.25□□□□□ -1.73
LSAMP-204ENST00000475403 SPINK6Q6UWN8 80 aa4.25□□□□□ -1.73
LSAMP-204ENST00000475403 LINC00269Q8N2A0 174 aa4.25□□□□□ -1.73
LSAMP-204ENST00000475403 ZNF73O43830 326 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms