RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 KRTAP19-1Q8IUB9 90 aa10.4□□□□□ -0.74
VPS36-203ENST00000475375 VAMP3Q15836 100 aa10.39□□□□□ -0.75
VPS36-203ENST00000475375 Q6ZVH6 145 aa10.39□□□□□ -0.75
VPS36-203ENST00000475375 LST1O00453 97 aa10.38□□□□□ -0.75
VPS36-203ENST00000475375 MT2AP02795 61 aa10.38□□□□□ -0.75
VPS36-203ENST00000475375 Q6ZQY7 126 aa10.38□□□□□ -0.75
VPS36-203ENST00000475375 OCIAD2Q56VL3 154 aa10.37□□□□□ -0.75
VPS36-203ENST00000475375 LINC00575Q6W349 94 aa10.36□□□□□ -0.75
VPS36-203ENST00000475375 hADV29S1A0JD25 119 aa10.35□□□□□ -0.75
VPS36-203ENST00000475375 MACF1Q9UPN3 7388 aaKnown RBP10.34□□□□□ -0.75
VPS36-203ENST00000475375 COLCA2A8K830 154 aa10.34□□□□□ -0.75
VPS36-203ENST00000475375 C20orf166-AS1Q96NR2 134 aa10.34□□□□□ -0.75
VPS36-203ENST00000475375 FAM236DA0A1B0GTK5 79 aa10.33□□□□□ -0.76
VPS36-203ENST00000475375 LCE2BO14633 110 aa10.33□□□□□ -0.76
VPS36-203ENST00000475375 FAM236CP0DP71 79 aa10.33□□□□□ -0.76
VPS36-203ENST00000475375 C3orf79P0CE67 100 aa10.32□□□□□ -0.76
VPS36-203ENST00000475375 A8MUU9 505 aa10.31□□□□□ -0.76
VPS36-203ENST00000475375 KRTDAPP60985 99 aa10.31□□□□□ -0.76
VPS36-203ENST00000475375 ANKRD39Q53RE8 183 aa10.31□□□□□ -0.76
VPS36-203ENST00000475375 MT1FP04733 61 aa10.3□□□□□ -0.76
VPS36-203ENST00000475375 HIST1H2BKO60814 126 aa10.29□□□□□ -0.76
VPS36-203ENST00000475375 HIST1H2BJP06899 126 aa10.29□□□□□ -0.76
VPS36-203ENST00000475375 HIST1H2BOP23527 126 aa10.29□□□□□ -0.76
VPS36-203ENST00000475375 HIST1H2BBP33778 126 aa10.29□□□□□ -0.76
VPS36-203ENST00000475375 HIST1H2BDP58876 126 aa10.29□□□□□ -0.76
VPS36-203ENST00000475375 HIST1H2BCP62807 126 aa10.29□□□□□ -0.76
VPS36-203ENST00000475375 HIST2H2BEQ16778 126 aa10.29□□□□□ -0.76
VPS36-203ENST00000475375 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.29□□□□□ -0.76
VPS36-203ENST00000475375 HIST1H2BHQ93079 126 aa10.29□□□□□ -0.76
VPS36-203ENST00000475375 HIST1H2BNQ99877 126 aa10.29□□□□□ -0.76
VPS36-203ENST00000475375 HIST1H2BMQ99879 126 aa10.29□□□□□ -0.76
VPS36-203ENST00000475375 SNHG12Q9BXW3 62 aa10.29□□□□□ -0.76
VPS36-203ENST00000475375 H3BUT2 72 aa10.28□□□□□ -0.76
VPS36-203ENST00000475375 KRTAP10-10P60014 251 aa10.28□□□□□ -0.76
VPS36-203ENST00000475375 SS18L2Q9UHA2 77 aa10.27□□□□□ -0.77
VPS36-203ENST00000475375 SYNE2Q8WXH0 6885 aaKnown RBP10.25□□□□□ -0.77
VPS36-203ENST00000475375 ATOH7Q8N100 152 aa10.25□□□□□ -0.77
VPS36-203ENST00000475375 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.24□□□□□ -0.77
VPS36-203ENST00000475375 KRTAP9-3Q9BYQ3 159 aa10.24□□□□□ -0.77
VPS36-203ENST00000475375 SCGB1D1O95968 90 aa10.23□□□□□ -0.77
VPS36-203ENST00000475375 PPDPFLQ8WWR9 84 aa10.22□□□□□ -0.77
VPS36-203ENST00000475375 DSCR10P59022 87 aa10.2□□□□□ -0.78
VPS36-203ENST00000475375 RBM12B-AS1Q9P1G2 102 aa10.2□□□□□ -0.78
VPS36-203ENST00000475375 LINC00846Q9NV44 126 aa10.18□□□□□ -0.78
VPS36-203ENST00000475375 TEN1Q86WV5 123 aa10.15□□□□□ -0.78
VPS36-203ENST00000475375 A0A087WSZ3 146 aa10.14□□□□□ -0.79
VPS36-203ENST00000475375 KRTAP16-1A8MUX0 517 aa10.14□□□□□ -0.79
VPS36-203ENST00000475375 SIGMAR1Q99720 223 aa10.14□□□□□ -0.79
VPS36-203ENST00000475375 BVES-AS1Q5T3Y7 98 aa10.13□□□□□ -0.79
VPS36-203ENST00000475375 C12orf57Q99622 126 aa10.11□□□□□ -0.79
VPS36-203ENST00000475375 HRES1P13985 223 aa10.1□□□□□ -0.79
VPS36-203ENST00000475375 MPLKIPQ8TAP9 179 aa10.09□□□□□ -0.79
VPS36-203ENST00000475375 LINC00313P59037 77 aa10.08□□□□□ -0.8
VPS36-203ENST00000475375 SNRPEP62304 92 aaKnown RBP10.07□□□□□ -0.8
VPS36-203ENST00000475375 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
VPS36-203ENST00000475375 COA6Q5JTJ3 125 aaKnown RBP10.06□□□□□ -0.8
VPS36-203ENST00000475375 KRTAP19-6Q3LI70 58 aa10.05□□□□□ -0.8
VPS36-203ENST00000475375 SNCGO76070 127 aa10.04□□□□□ -0.8
VPS36-203ENST00000475375 IGKV4-1P06312 121 aa10.01□□□□□ -0.81
VPS36-203ENST00000475375 NOTCH2NLQ7Z3S9 236 aa10.01□□□□□ -0.81
VPS36-203ENST00000475375 HSBP1L1C9JCN9 74 aa10□□□□□ -0.81
VPS36-203ENST00000475375 H3BMG7 143 aa10□□□□□ -0.81
VPS36-203ENST00000475375 MTURNQ8N3F0 131 aa10□□□□□ -0.81
VPS36-203ENST00000475375 HIST1H4GQ99525 98 aa9.99□□□□□ -0.81
VPS36-203ENST00000475375 FABP2P12104 132 aa9.95□□□□□ -0.82
VPS36-203ENST00000475375 A0A1W2PNM2 257 aa9.94□□□□□ -0.82
VPS36-203ENST00000475375 H0YGX0 51 aa9.93□□□□□ -0.82
VPS36-203ENST00000475375 FAM218AQ96MZ4 157 aa9.93□□□□□ -0.82
VPS36-203ENST00000475375 IGHV6-1A0A0B4J1U7 121 aa9.91□□□□□ -0.82
VPS36-203ENST00000475375 DEFB116Q30KQ4 102 aa9.91□□□□□ -0.82
VPS36-203ENST00000475375 KRTAP6-3Q3LI67 103 aa9.91□□□□□ -0.82
VPS36-203ENST00000475375 GHRHP01286 108 aa9.9□□□□□ -0.82
VPS36-203ENST00000475375 RAB37Q96AX2 223 aa9.9□□□□□ -0.82
VPS36-203ENST00000475375 A0A1B0GV72 72 aa9.86□□□□□ -0.83
VPS36-203ENST00000475375 A8MWP4 228 aa9.85□□□□□ -0.83
VPS36-203ENST00000475375 ANKRD29Q8N6D5 301 aa9.85□□□□□ -0.83
VPS36-203ENST00000475375 TRBV7-4A0A0J9YYF1 115 aa9.84□□□□□ -0.83
VPS36-203ENST00000475375 Q8N9P0 234 aaPredicted RBP9.83□□□□□ -0.84
VPS36-203ENST00000475375 S100A2P29034 98 aa9.82□□□□□ -0.84
VPS36-203ENST00000475375 SPINK7P58062 85 aa9.82□□□□□ -0.84
VPS36-203ENST00000475375 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
VPS36-203ENST00000475375 A0A1B0GX51 115 aa9.8□□□□□ -0.84
VPS36-203ENST00000475375 ZCCHC13Q8WW36 166 aaKnown RBP9.8□□□□□ -0.84
VPS36-203ENST00000475375 HIST1H2BLQ99880 126 aa9.8□□□□□ -0.84
VPS36-203ENST00000475375 A0A0B4J2C4 111 aa9.78□□□□□ -0.84
VPS36-203ENST00000475375 HIST3H2BBQ8N257 126 aa9.78□□□□□ -0.84
VPS36-203ENST00000475375 C8orf87E5RJ46 101 aa9.77□□□□□ -0.85
VPS36-203ENST00000475375 TRACP01848 142 aa9.77□□□□□ -0.85
VPS36-203ENST00000475375 COX8AP10176 69 aa9.77□□□□□ -0.85
VPS36-203ENST00000475375 A0A1B0GVX0 72 aa9.75□□□□□ -0.85
VPS36-203ENST00000475375 CCKP06307 115 aa9.75□□□□□ -0.85
VPS36-203ENST00000475375 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
VPS36-203ENST00000475375 DNAL4O96015 105 aa9.72□□□□□ -0.85
VPS36-203ENST00000475375 ORMDL1Q9P0S3 153 aa9.71□□□□□ -0.86
VPS36-203ENST00000475375 PRO1854Q9UHT4 67 aa9.7□□□□□ -0.86
VPS36-203ENST00000475375 DLEU1O43261 78 aa9.69□□□□□ -0.86
VPS36-203ENST00000475375 NEBP20929 6669 aa9.69□□□□□ -0.86
VPS36-203ENST00000475375 TRIAP1O43715 76 aa9.68□□□□□ -0.86
VPS36-203ENST00000475375 VPS25Q9BRG1 176 aa9.68□□□□□ -0.86
VPS36-203ENST00000475375 H3BQ85 93 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms