RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 VPS13BQ7Z7G8 4022 aa7.41□□□□□ -1.22
HLA-DOB-208ENST00000475235 A0A1B0GW54 56 aa7.41□□□□□ -1.22
HLA-DOB-208ENST00000475235 C11orf86A6NJI1 115 aa7.41□□□□□ -1.22
HLA-DOB-208ENST00000475235 Q6ZRP5 223 aa7.41□□□□□ -1.22
HLA-DOB-208ENST00000475235 OBSCN-AS1Q96MR7 158 aa7.4□□□□□ -1.22
HLA-DOB-208ENST00000475235 CDC42SE2Q9NRR3 84 aa7.4□□□□□ -1.22
HLA-DOB-208ENST00000475235 IGHV3-64A0A075B6Q5 118 aa7.39□□□□□ -1.23
HLA-DOB-208ENST00000475235 LINC00959A0A1B0GUT2 108 aa7.39□□□□□ -1.23
HLA-DOB-208ENST00000475235 C15orf56Q8N910 161 aa7.39□□□□□ -1.23
HLA-DOB-208ENST00000475235 IGKV3D-7A0A0C4DH55 119 aa7.38□□□□□ -1.23
HLA-DOB-208ENST00000475235 RPL28P46779 137 aaKnown RBP7.38□□□□□ -1.23
HLA-DOB-208ENST00000475235 LIMD2Q9BT23 127 aa7.38□□□□□ -1.23
HLA-DOB-208ENST00000475235 NDUFA12Q9UI09 145 aa7.38□□□□□ -1.23
HLA-DOB-208ENST00000475235 A0A087WVE0 104 aa7.37□□□□□ -1.23
HLA-DOB-208ENST00000475235 GVQW2A0A096LPI5 108 aaPredicted RBP7.37□□□□□ -1.23
HLA-DOB-208ENST00000475235 TRAV22A0A0B4J277 110 aa7.37□□□□□ -1.23
HLA-DOB-208ENST00000475235 TRBV7-4A0A0J9YYF1 115 aa7.37□□□□□ -1.23
HLA-DOB-208ENST00000475235 SLPIP03973 132 aa7.37□□□□□ -1.23
HLA-DOB-208ENST00000475235 SCGB3A1Q96QR1 104 aa7.37□□□□□ -1.23
HLA-DOB-208ENST00000475235 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.37□□□□□ -1.23
HLA-DOB-208ENST00000475235 HIGD2BQ4VC39 106 aa7.36□□□□□ -1.23
HLA-DOB-208ENST00000475235 SMIM2Q9BVW6 85 aa7.36□□□□□ -1.23
HLA-DOB-208ENST00000475235 BAALC-AS2P0C853 105 aa7.35□□□□□ -1.23
HLA-DOB-208ENST00000475235 SRRM2Q9UQ35 2752 aaKnown RBP7.35□□□□□ -1.23
HLA-DOB-208ENST00000475235 MYCBP2O75592 4640 aa7.34□□□□□ -1.23
HLA-DOB-208ENST00000475235 IGIPA6NJ69 53 aa7.34□□□□□ -1.23
HLA-DOB-208ENST00000475235 CDC42SE1Q9NRR8 79 aa7.34□□□□□ -1.23
HLA-DOB-208ENST00000475235 TRAV23DV6A0A075B6W5 121 aa7.33□□□□□ -1.24
HLA-DOB-208ENST00000475235 HCG22E2RYF7 251 aa7.33□□□□□ -1.24
HLA-DOB-208ENST00000475235 PANO1I0J062 215 aa7.33□□□□□ -1.24
HLA-DOB-208ENST00000475235 A0A0J9YXY3 114 aa7.32□□□□□ -1.24
HLA-DOB-208ENST00000475235 RPL37AP61513 92 aaKnown RBP7.32□□□□□ -1.24
HLA-DOB-208ENST00000475235 SPACA4Q8TDM5 124 aa7.32□□□□□ -1.24
HLA-DOB-208ENST00000475235 LINC00846Q9NV44 126 aa7.32□□□□□ -1.24
HLA-DOB-208ENST00000475235 HERC1Q15751 4861 aa7.32□□□□□ -1.24
HLA-DOB-208ENST00000475235 KRTAP10-4P60372 401 aaPredicted RBP7.32□□□□□ -1.24
HLA-DOB-208ENST00000475235 COX6A2Q02221 97 aa7.32□□□□□ -1.24
HLA-DOB-208ENST00000475235 MUSTN1Q8IVN3 82 aa7.32□□□□□ -1.24
HLA-DOB-208ENST00000475235 ZNF706Q9Y5V0 76 aaPredicted RBP7.32□□□□□ -1.24
HLA-DOB-208ENST00000475235 RNASE13Q5GAN3 156 aaKnown RBP7.31□□□□□ -1.24
HLA-DOB-208ENST00000475235 Q5VV11 94 aa7.31□□□□□ -1.24
HLA-DOB-208ENST00000475235 TMEM254Q8TBM7 123 aa7.31□□□□□ -1.24
HLA-DOB-208ENST00000475235 AMELXQ99217 191 aa7.31□□□□□ -1.24
HLA-DOB-208ENST00000475235 A0A087WYN8 130 aa7.3□□□□□ -1.24
HLA-DOB-208ENST00000475235 LEPROTO15243 131 aa7.3□□□□□ -1.24
HLA-DOB-208ENST00000475235 CHTF8P0CG12 524 aa7.3□□□□□ -1.24
HLA-DOB-208ENST00000475235 RPL39P62891 51 aaKnown RBP7.3□□□□□ -1.24
HLA-DOB-208ENST00000475235 ADAMTSL4-AS1Q5T5F5 129 aa7.3□□□□□ -1.24
HLA-DOB-208ENST00000475235 KRTAP29-1A8MX34 341 aaPredicted RBP7.29□□□□□ -1.24
HLA-DOB-208ENST00000475235 H7C2G1 150 aa7.29□□□□□ -1.24
HLA-DOB-208ENST00000475235 SEC61BP60468 96 aaKnown RBP7.29□□□□□ -1.24
HLA-DOB-208ENST00000475235 C9orf116Q5BN46 136 aaPredicted RBP7.29□□□□□ -1.24
HLA-DOB-208ENST00000475235 PLAC8Q9NZF1 115 aa7.29□□□□□ -1.24
HLA-DOB-208ENST00000475235 SNURFQ9Y675 71 aa7.29□□□□□ -1.24
HLA-DOB-208ENST00000475235 IGKV2-24A0A0C4DH68 120 aa7.28□□□□□ -1.24
HLA-DOB-208ENST00000475235 LINC00242Q5T6M2 205 aa7.27□□□□□ -1.25
HLA-DOB-208ENST00000475235 C7orf33Q8WU49 177 aa7.27□□□□□ -1.25
HLA-DOB-208ENST00000475235 IGLV4-69A0A075B6H9 119 aa7.27□□□□□ -1.25
HLA-DOB-208ENST00000475235 CAMK2N2Q96S95 79 aa7.27□□□□□ -1.25
HLA-DOB-208ENST00000475235 UBL5Q9BZL1 73 aa7.27□□□□□ -1.25
HLA-DOB-208ENST00000475235 C22orf24Q9Y442 160 aa7.27□□□□□ -1.25
HLA-DOB-208ENST00000475235 A0A096LNI7 61 aa7.26□□□□□ -1.25
HLA-DOB-208ENST00000475235 SPTSSBQ8NFR3 76 aa7.26□□□□□ -1.25
HLA-DOB-208ENST00000475235 FAM104AQ969W3 186 aa7.26□□□□□ -1.25
HLA-DOB-208ENST00000475235 SPAG11BQ08648 103 aa7.25□□□□□ -1.25
HLA-DOB-208ENST00000475235 DMBT1Q9UGM3 2413 aaPredicted RBP7.24□□□□□ -1.25
HLA-DOB-208ENST00000475235 IGLV4-3A0A075B6K6 122 aa7.24□□□□□ -1.25
HLA-DOB-208ENST00000475235 FLG2Q5D862 2391 aaPredicted RBP7.24□□□□□ -1.25
HLA-DOB-208ENST00000475235 LOC101927531A0A1B0GV80 90 aa7.23□□□□□ -1.25
HLA-DOB-208ENST00000475235 C2orf66Q6UXQ4 117 aa7.23□□□□□ -1.25
HLA-DOB-208ENST00000475235 JMJD7-PLA2G4BH0Y9G9 81 aa7.22□□□□□ -1.25
HLA-DOB-208ENST00000475235 CHKB-CPT1BH3BT56 60 aa7.22□□□□□ -1.25
HLA-DOB-208ENST00000475235 XAGE1AQ9HD64 81 aa7.22□□□□□ -1.25
HLA-DOB-208ENST00000475235 FAT3Q8TDW7 4589 aa7.21□□□□□ -1.26
HLA-DOB-208ENST00000475235 NDUFA1O15239 70 aa7.21□□□□□ -1.26
HLA-DOB-208ENST00000475235 LRP1Q07954 4544 aaKnown RBP7.2□□□□□ -1.26
HLA-DOB-208ENST00000475235 ELOF1P60002 83 aaKnown RBP7.2□□□□□ -1.26
HLA-DOB-208ENST00000475235 NREPQ16612 68 aa7.18□□□□□ -1.26
HLA-DOB-208ENST00000475235 C1orf64Q8NEQ6 169 aa7.18□□□□□ -1.26
HLA-DOB-208ENST00000475235 PKHD1L1Q86WI1 4243 aa7.18□□□□□ -1.26
HLA-DOB-208ENST00000475235 CASC2Q6XLA1 102 aa7.17□□□□□ -1.26
HLA-DOB-208ENST00000475235 TLX1NBP0CAT3 122 aa7.17□□□□□ -1.26
HLA-DOB-208ENST00000475235 LITAFQ99732 161 aa7.17□□□□□ -1.26
HLA-DOB-208ENST00000475235 H0YGX0 51 aa7.16□□□□□ -1.26
HLA-DOB-208ENST00000475235 MOBPQ13875 183 aa7.16□□□□□ -1.26
HLA-DOB-208ENST00000475235 UNQ6190/PRO20217Q6UXQ8 127 aa7.16□□□□□ -1.26
HLA-DOB-208ENST00000475235 A0A1W2PNN7 141 aa7.15□□□□□ -1.27
HLA-DOB-208ENST00000475235 TSPEAR-AS2P59090 65 aa7.15□□□□□ -1.27
HLA-DOB-208ENST00000475235 C10orf25Q5T742 122 aa7.15□□□□□ -1.27
HLA-DOB-208ENST00000475235 RETNLBQ9BQ08 111 aa7.15□□□□□ -1.27
HLA-DOB-208ENST00000475235 C6orf48Q9UBA6 75 aa7.15□□□□□ -1.27
HLA-DOB-208ENST00000475235 SPINK6Q6UWN8 80 aa7.13□□□□□ -1.27
HLA-DOB-208ENST00000475235 Q8IZM0 81 aa7.12□□□□□ -1.27
HLA-DOB-208ENST00000475235 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
HLA-DOB-208ENST00000475235 C14orf132Q9NPU4 83 aa7.12□□□□□ -1.27
HLA-DOB-208ENST00000475235 TOMM7Q9P0U1 55 aa7.12□□□□□ -1.27
HLA-DOB-208ENST00000475235 A6NED7 52 aa7.11□□□□□ -1.27
HLA-DOB-208ENST00000475235 CDKN2A-AS1Q9UH64 79 aa7.11□□□□□ -1.27
HLA-DOB-208ENST00000475235 NDUFB1O75438 58 aa7.11□□□□□ -1.27
HLA-DOB-208ENST00000475235 Q9BRP9 147 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms