RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 IGFL1Q6UW32 110 aa7.97□□□□□ -1.13
ITGB1-211ENST00000475184 A8MUU9 505 aa7.96□□□□□ -1.14
ITGB1-211ENST00000475184 LINC00846Q9NV44 126 aa7.96□□□□□ -1.14
ITGB1-211ENST00000475184 FAM236DA0A1B0GTK5 79 aa7.95□□□□□ -1.14
ITGB1-211ENST00000475184 FAM236CP0DP71 79 aa7.95□□□□□ -1.14
ITGB1-211ENST00000475184 SYS1-DBNDD2H3BUS1 97 aa7.94□□□□□ -1.14
ITGB1-211ENST00000475184 COPS9Q8WXC6 57 aa7.94□□□□□ -1.14
ITGB1-211ENST00000475184 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
ITGB1-211ENST00000475184 LST1O00453 97 aa7.93□□□□□ -1.14
ITGB1-211ENST00000475184 SMIM11BQ8TCY0 68 aa7.93□□□□□ -1.14
ITGB1-211ENST00000475184 SCGB1D4Q6XE38 83 aa7.92□□□□□ -1.14
ITGB1-211ENST00000475184 SLC7A5P1Q8MH63 180 aa7.92□□□□□ -1.14
ITGB1-211ENST00000475184 IFITM1P13164 125 aa7.91□□□□□ -1.14
ITGB1-211ENST00000475184 KRTAP19-6Q3LI70 58 aa7.91□□□□□ -1.14
ITGB1-211ENST00000475184 OCIAD2Q56VL3 154 aa7.91□□□□□ -1.14
ITGB1-211ENST00000475184 LINC01545Q5VT33 79 aa7.9□□□□□ -1.14
ITGB1-211ENST00000475184 Q6ZQY7 126 aa7.9□□□□□ -1.14
ITGB1-211ENST00000475184 LINC00575Q6W349 94 aa7.88□□□□□ -1.15
ITGB1-211ENST00000475184 VAMP3Q15836 100 aa7.87□□□□□ -1.15
ITGB1-211ENST00000475184 Q6ZVH6 145 aa7.87□□□□□ -1.15
ITGB1-211ENST00000475184 MUSTN1Q8IVN3 82 aa7.87□□□□□ -1.15
ITGB1-211ENST00000475184 hADV29S1A0JD25 119 aa7.85□□□□□ -1.15
ITGB1-211ENST00000475184 KRTAP6-3Q3LI67 103 aa7.85□□□□□ -1.15
ITGB1-211ENST00000475184 PET117Q6UWS5 81 aa7.85□□□□□ -1.15
ITGB1-211ENST00000475184 RBM12B-AS1Q9P1G2 102 aa7.85□□□□□ -1.15
ITGB1-211ENST00000475184 SS18L2Q9UHA2 77 aa7.85□□□□□ -1.15
ITGB1-211ENST00000475184 KRTAP16-1A8MUX0 517 aa7.84□□□□□ -1.15
ITGB1-211ENST00000475184 MPLKIPQ8TAP9 179 aa7.84□□□□□ -1.15
ITGB1-211ENST00000475184 H3BUT2 72 aa7.82□□□□□ -1.16
ITGB1-211ENST00000475184 HRES1P13985 223 aa7.81□□□□□ -1.16
ITGB1-211ENST00000475184 DSCR10P59022 87 aa7.81□□□□□ -1.16
ITGB1-211ENST00000475184 SCGB1D1O95968 90 aa7.79□□□□□ -1.16
ITGB1-211ENST00000475184 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.79□□□□□ -1.16
ITGB1-211ENST00000475184 PPDPFLQ8WWR9 84 aa7.79□□□□□ -1.16
ITGB1-211ENST00000475184 SNHG12Q9BXW3 62 aa7.79□□□□□ -1.16
ITGB1-211ENST00000475184 ANKRD39Q53RE8 183 aa7.78□□□□□ -1.16
ITGB1-211ENST00000475184 C3orf79P0CE67 100 aa7.76□□□□□ -1.17
ITGB1-211ENST00000475184 COLCA2A8K830 154 aa7.75□□□□□ -1.17
ITGB1-211ENST00000475184 TEN1Q86WV5 123 aa7.74□□□□□ -1.17
ITGB1-211ENST00000475184 A0A087WSZ3 146 aa7.73□□□□□ -1.17
ITGB1-211ENST00000475184 NOTCH2NLQ7Z3S9 236 aa7.73□□□□□ -1.17
ITGB1-211ENST00000475184 HIST1H2BKO60814 126 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 HIST1H2BJP06899 126 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 HIST1H2BOP23527 126 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 HIST1H2BBP33778 126 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-211ENST00000475184 HIST1H2BDP58876 126 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 KRTDAPP60985 99 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 HIST1H2BCP62807 126 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 HIST2H2BEQ16778 126 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.72□□□□□ -1.17
ITGB1-211ENST00000475184 HIST1H2BHQ93079 126 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 SIGMAR1Q99720 223 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 HIST1H2BNQ99877 126 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 HIST1H2BMQ99879 126 aa7.72□□□□□ -1.17
ITGB1-211ENST00000475184 LINC00313P59037 77 aa7.71□□□□□ -1.18
ITGB1-211ENST00000475184 ATOH7Q8N100 152 aa7.7□□□□□ -1.18
ITGB1-211ENST00000475184 MTURNQ8N3F0 131 aa7.69□□□□□ -1.18
ITGB1-211ENST00000475184 BVES-AS1Q5T3Y7 98 aa7.68□□□□□ -1.18
ITGB1-211ENST00000475184 NEBP20929 6669 aa7.66□□□□□ -1.18
ITGB1-211ENST00000475184 C12orf57Q99622 126 aa7.65□□□□□ -1.18
ITGB1-211ENST00000475184 A8MWP4 228 aa7.64□□□□□ -1.19
ITGB1-211ENST00000475184 NDUFV3P56181 108 aaKnown RBP7.64□□□□□ -1.19
ITGB1-211ENST00000475184 Q8N9P0 234 aaPredicted RBP7.63□□□□□ -1.19
ITGB1-211ENST00000475184 IGKV4-1P06312 121 aa7.62□□□□□ -1.19
ITGB1-211ENST00000475184 A6NJY4 79 aa7.6□□□□□ -1.19
ITGB1-211ENST00000475184 H3BMG7 143 aa7.59□□□□□ -1.19
ITGB1-211ENST00000475184 A0A1W2PNM2 257 aa7.58□□□□□ -1.2
ITGB1-211ENST00000475184 SNRPEP62304 92 aaKnown RBP7.57□□□□□ -1.2
ITGB1-211ENST00000475184 MUC12Q9UKN1 5478 aa7.57□□□□□ -1.2
ITGB1-211ENST00000475184 SNCGO76070 127 aa7.56□□□□□ -1.2
ITGB1-211ENST00000475184 COA6Q5JTJ3 125 aaKnown RBP7.56□□□□□ -1.2
ITGB1-211ENST00000475184 IGHV6-1A0A0B4J1U7 121 aa7.54□□□□□ -1.2
ITGB1-211ENST00000475184 SPINK7P58062 85 aa7.54□□□□□ -1.2
ITGB1-211ENST00000475184 DEFB116Q30KQ4 102 aa7.53□□□□□ -1.2
ITGB1-211ENST00000475184 FAM218AQ96MZ4 157 aa7.53□□□□□ -1.2
ITGB1-211ENST00000475184 KRTAP20-1Q3LI63 56 aa7.52□□□□□ -1.21
ITGB1-211ENST00000475184 FABP2P12104 132 aa7.51□□□□□ -1.21
ITGB1-211ENST00000475184 ZCCHC13Q8WW36 166 aaKnown RBP7.51□□□□□ -1.21
ITGB1-211ENST00000475184 TRBV7-4A0A0J9YYF1 115 aa7.5□□□□□ -1.21
ITGB1-211ENST00000475184 H0YGX0 51 aa7.5□□□□□ -1.21
ITGB1-211ENST00000475184 LINC00472Q9H8W2 130 aa7.5□□□□□ -1.21
ITGB1-211ENST00000475184 HIST1H4GQ99525 98 aa7.49□□□□□ -1.21
ITGB1-211ENST00000475184 GHRHP01286 108 aa7.48□□□□□ -1.21
ITGB1-211ENST00000475184 WFDC13Q8IUB5 93 aa7.47□□□□□ -1.21
ITGB1-211ENST00000475184 HSBP1L1C9JCN9 74 aa7.46□□□□□ -1.22
ITGB1-211ENST00000475184 C8orf87E5RJ46 101 aa7.46□□□□□ -1.22
ITGB1-211ENST00000475184 ANKRD29Q8N6D5 301 aa7.46□□□□□ -1.22
ITGB1-211ENST00000475184 RAB37Q96AX2 223 aa7.45□□□□□ -1.22
ITGB1-211ENST00000475184 A0A1B0GVX0 72 aa7.44□□□□□ -1.22
ITGB1-211ENST00000475184 A0A1B0GX51 115 aa7.43□□□□□ -1.22
ITGB1-211ENST00000475184 A0A1B0GV72 72 aa7.42□□□□□ -1.22
ITGB1-211ENST00000475184 TRACP01848 142 aa7.4□□□□□ -1.22
ITGB1-211ENST00000475184 CCKP06307 115 aa7.39□□□□□ -1.23
ITGB1-211ENST00000475184 A0A0B4J2C4 111 aa7.38□□□□□ -1.23
ITGB1-211ENST00000475184 A6NN06 94 aa7.37□□□□□ -1.23
ITGB1-211ENST00000475184 COX8AP10176 69 aa7.33□□□□□ -1.24
ITGB1-211ENST00000475184 H1FX-AS1Q4G0G2 97 aa7.33□□□□□ -1.24
ITGB1-211ENST00000475184 LYRM7Q5U5X0 104 aa7.33□□□□□ -1.24
ITGB1-211ENST00000475184 ORMDL1Q9P0S3 153 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms