RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 KRTAP13-3Q3SY46 172 aa5.3□□□□□ -1.56
PDPN-204ENST00000475043 HIST3H2BBQ8N257 126 aa5.3□□□□□ -1.56
PDPN-204ENST00000475043 LAMTOR3Q9UHA4 124 aa5.3□□□□□ -1.56
PDPN-204ENST00000475043 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
PDPN-204ENST00000475043 S100A1P23297 94 aa5.29□□□□□ -1.56
PDPN-204ENST00000475043 Q1RN00 199 aa5.29□□□□□ -1.56
PDPN-204ENST00000475043 HRCT1Q6UXD1 115 aa5.29□□□□□ -1.56
PDPN-204ENST00000475043 HIST1H2BLQ99880 126 aa5.29□□□□□ -1.56
PDPN-204ENST00000475043 TRBV7-6A0A0J9YX20 115 aa5.28□□□□□ -1.56
PDPN-204ENST00000475043 A0A1B0GWB2 263 aa5.28□□□□□ -1.56
PDPN-204ENST00000475043 TRAV13-2A0A0B4J235 113 aa5.27□□□□□ -1.57
PDPN-204ENST00000475043 TEX49A0A1B0GTD5 131 aa5.27□□□□□ -1.57
PDPN-204ENST00000475043 SMIM11BQ8TCY0 68 aa5.26□□□□□ -1.57
PDPN-204ENST00000475043 LIMD2Q9BT23 127 aa5.26□□□□□ -1.57
PDPN-204ENST00000475043 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
PDPN-204ENST00000475043 PRO1933Q9H354 126 aa5.25□□□□□ -1.57
PDPN-204ENST00000475043 NHP2Q9NX24 153 aaKnown RBP5.24□□□□□ -1.57
PDPN-204ENST00000475043 H7C2G1 150 aa5.23□□□□□ -1.57
PDPN-204ENST00000475043 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
PDPN-204ENST00000475043 VAMP3Q15836 100 aa5.23□□□□□ -1.57
PDPN-204ENST00000475043 ASB16-AS1Q495Z4 193 aa5.23□□□□□ -1.57
PDPN-204ENST00000475043 IGLV5-48A0A075B6I7 105 aa5.22□□□□□ -1.57
PDPN-204ENST00000475043 SMIM29Q86T20 159 aa5.22□□□□□ -1.57
PDPN-204ENST00000475043 A0A0G2JQZ4 141 aa5.21□□□□□ -1.58
PDPN-204ENST00000475043 PCP4P48539 62 aa5.21□□□□□ -1.58
PDPN-204ENST00000475043 LINC01547P58512 204 aaPredicted RBP5.21□□□□□ -1.58
PDPN-204ENST00000475043 CD164Q04900 197 aa5.21□□□□□ -1.58
PDPN-204ENST00000475043 HIST1H4GQ99525 98 aa5.21□□□□□ -1.58
PDPN-204ENST00000475043 C12orf57Q99622 126 aa5.2□□□□□ -1.58
PDPN-204ENST00000475043 MUC17Q685J3 4493 aa5.19□□□□□ -1.58
PDPN-204ENST00000475043 C9orf92A6NGG3 77 aa5.19□□□□□ -1.58
PDPN-204ENST00000475043 F8WEM9 126 aa5.19□□□□□ -1.58
PDPN-204ENST00000475043 LINC00575Q6W349 94 aa5.19□□□□□ -1.58
PDPN-204ENST00000475043 hADV29S1A0JD25 119 aa5.18□□□□□ -1.58
PDPN-204ENST00000475043 COX8AP10176 69 aa5.18□□□□□ -1.58
PDPN-204ENST00000475043 Q6ZQY7 126 aa5.18□□□□□ -1.58
PDPN-204ENST00000475043 BVES-AS1Q5T3Y7 98 aa5.16□□□□□ -1.58
PDPN-204ENST00000475043 C14orf144Q96I85 54 aa5.16□□□□□ -1.58
PDPN-204ENST00000475043 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
PDPN-204ENST00000475043 PAM16Q9Y3D7 125 aa5.16□□□□□ -1.58
PDPN-204ENST00000475043 DLEU1O43261 78 aa5.15□□□□□ -1.59
PDPN-204ENST00000475043 TCL1BO95988 128 aa5.15□□□□□ -1.59
PDPN-204ENST00000475043 C1orf195Q5TG92 126 aa5.15□□□□□ -1.59
PDPN-204ENST00000475043 Q5XG85 94 aa5.15□□□□□ -1.59
PDPN-204ENST00000475043 SPATA45Q537H7 98 aa5.14□□□□□ -1.59
PDPN-204ENST00000475043 RAB37Q96AX2 223 aa5.14□□□□□ -1.59
PDPN-204ENST00000475043 PCOTHQ58A44 107 aa5.13□□□□□ -1.59
PDPN-204ENST00000475043 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.13□□□□□ -1.59
PDPN-204ENST00000475043 VAMP8Q9BV40 100 aa5.13□□□□□ -1.59
PDPN-204ENST00000475043 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
PDPN-204ENST00000475043 CFC1BP0CG36 223 aa5.12□□□□□ -1.59
PDPN-204ENST00000475043 CFC1P0CG37 223 aa5.12□□□□□ -1.59
PDPN-204ENST00000475043 OCIAD2Q56VL3 154 aa5.12□□□□□ -1.59
PDPN-204ENST00000475043 Q6JHZ5 121 aa5.12□□□□□ -1.59
PDPN-204ENST00000475043 CLEC2BQ92478 149 aa5.12□□□□□ -1.59
PDPN-204ENST00000475043 IGLV8-61A0A075B6I0 122 aa5.11□□□□□ -1.59
PDPN-204ENST00000475043 SNCGO76070 127 aa5.11□□□□□ -1.59
PDPN-204ENST00000475043 IGFL1Q6UW32 110 aa5.11□□□□□ -1.59
PDPN-204ENST00000475043 SNHG12Q9BXW3 62 aa5.11□□□□□ -1.59
PDPN-204ENST00000475043 HIGD1BQ9P298 99 aa5.11□□□□□ -1.59
PDPN-204ENST00000475043 PPDPFLQ8WWR9 84 aa5.1□□□□□ -1.59
PDPN-204ENST00000475043 A0A0B4J2C4 111 aa5.09□□□□□ -1.59
PDPN-204ENST00000475043 TRBV7-7A0A0K0K1E9 115 aa5.09□□□□□ -1.59
PDPN-204ENST00000475043 C2orf91Q6ZV80 131 aa5.09□□□□□ -1.59
PDPN-204ENST00000475043 H0YGX0 51 aa5.08□□□□□ -1.6
PDPN-204ENST00000475043 H3BUT2 72 aa5.08□□□□□ -1.6
PDPN-204ENST00000475043 CEND1Q8N111 149 aa5.08□□□□□ -1.6
PDPN-204ENST00000475043 LOC105371267A0A1B0GV96 52 aa5.07□□□□□ -1.6
PDPN-204ENST00000475043 FAM218AQ96MZ4 157 aa5.07□□□□□ -1.6
PDPN-204ENST00000475043 RPL37P61927 97 aaKnown RBP5.06□□□□□ -1.6
PDPN-204ENST00000475043 PRO1854Q9UHT4 67 aa5.06□□□□□ -1.6
PDPN-204ENST00000475043 LST1O00453 97 aa5.04□□□□□ -1.6
PDPN-204ENST00000475043 FXYD2P54710 66 aa5.04□□□□□ -1.6
PDPN-204ENST00000475043 NDUFV3P56181 108 aaKnown RBP5.04□□□□□ -1.6
PDPN-204ENST00000475043 H3BMG7 143 aa5.03□□□□□ -1.6
PDPN-204ENST00000475043 FABP2P12104 132 aa5.03□□□□□ -1.6
PDPN-204ENST00000475043 PYY3Q5JQD4 70 aa5.03□□□□□ -1.6
PDPN-204ENST00000475043 OBSCN-AS1Q96MR7 158 aa5.03□□□□□ -1.6
PDPN-204ENST00000475043 A0A1B0GX51 115 aa5.02□□□□□ -1.61
PDPN-204ENST00000475043 TRIAP1O43715 76 aa5.02□□□□□ -1.61
PDPN-204ENST00000475043 PSMB2P49721 201 aa5.02□□□□□ -1.61
PDPN-204ENST00000475043 TEN1Q86WV5 123 aa5.02□□□□□ -1.61
PDPN-204ENST00000475043 SS18L2Q9UHA2 77 aa5.02□□□□□ -1.61
PDPN-204ENST00000475043 HSD52Q0P140 79 aa5.01□□□□□ -1.61
PDPN-204ENST00000475043 A0A087WSZ3 146 aa5□□□□□ -1.61
PDPN-204ENST00000475043 K7ERJ3 54 aa5□□□□□ -1.61
PDPN-204ENST00000475043 DNAL4O96015 105 aa5□□□□□ -1.61
PDPN-204ENST00000475043 KRTAP19-2Q3LHN2 52 aa5□□□□□ -1.61
PDPN-204ENST00000475043 Q6Q795 121 aa5□□□□□ -1.61
PDPN-204ENST00000475043 A0A1B0GV72 72 aa4.99□□□□□ -1.61
PDPN-204ENST00000475043 ATP11AUNQ6ZP68 121 aa4.99□□□□□ -1.61
PDPN-204ENST00000475043 COX6CP09669 75 aa4.98□□□□□ -1.61
PDPN-204ENST00000475043 MT1HP80294 61 aa4.98□□□□□ -1.61
PDPN-204ENST00000475043 COX6B2Q6YFQ2 88 aa4.98□□□□□ -1.61
PDPN-204ENST00000475043 Q96NJ1 140 aa4.98□□□□□ -1.61
PDPN-204ENST00000475043 ORMDL1Q9P0S3 153 aa4.98□□□□□ -1.61
PDPN-204ENST00000475043 Q75L30 129 aa4.97□□□□□ -1.61
PDPN-204ENST00000475043 UQCR10Q9UDW1 63 aa4.97□□□□□ -1.61
PDPN-204ENST00000475043 A0A1W2PNM2 257 aa4.96□□□□□ -1.62
PDPN-204ENST00000475043 ANKRD29Q8N6D5 301 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms