RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 Q6JHZ5 121 aa7.73□□□□□ -1.17
HPS4-210ENST00000473782 HSBP1O75506 76 aa7.71□□□□□ -1.18
HPS4-210ENST00000473782 LINC00310P59036 64 aa7.71□□□□□ -1.18
HPS4-210ENST00000473782 F8WEM9 126 aa7.7□□□□□ -1.18
HPS4-210ENST00000473782 LEPROTL1O95214 131 aa7.7□□□□□ -1.18
HPS4-210ENST00000473782 SERF1AO75920 110 aa7.69□□□□□ -1.18
HPS4-210ENST00000473782 DSCR10P59022 87 aa7.69□□□□□ -1.18
HPS4-210ENST00000473782 KRTAP5-9P26371 169 aa7.68□□□□□ -1.18
HPS4-210ENST00000473782 OCIAD2Q56VL3 154 aa7.68□□□□□ -1.18
HPS4-210ENST00000473782 A4D1N5 150 aa7.67□□□□□ -1.18
HPS4-210ENST00000473782 A8MWP4 228 aa7.66□□□□□ -1.18
HPS4-210ENST00000473782 YPEL4Q96NS1 127 aa7.66□□□□□ -1.18
HPS4-210ENST00000473782 Q6ZVH6 145 aa7.65□□□□□ -1.18
HPS4-210ENST00000473782 TTTY13Q9BZ97 58 aa7.65□□□□□ -1.18
HPS4-210ENST00000473782 NHP2Q9NX24 153 aaKnown RBP7.65□□□□□ -1.18
HPS4-210ENST00000473782 TRAV13-2A0A0B4J235 113 aa7.64□□□□□ -1.19
HPS4-210ENST00000473782 SMIM11BQ8TCY0 68 aa7.63□□□□□ -1.19
HPS4-210ENST00000473782 A6NDN8 102 aa7.62□□□□□ -1.19
HPS4-210ENST00000473782 KRTAP2-3P0C7H8 128 aa7.62□□□□□ -1.19
HPS4-210ENST00000473782 FABP4P15090 132 aa7.62□□□□□ -1.19
HPS4-210ENST00000473782 KRTAP2-4Q9BYR9 128 aa7.62□□□□□ -1.19
HPS4-210ENST00000473782 LINC00575Q6W349 94 aa7.61□□□□□ -1.19
HPS4-210ENST00000473782 Q6ZQY7 126 aa7.61□□□□□ -1.19
HPS4-210ENST00000473782 SLC7A5P1Q8MH63 180 aa7.6□□□□□ -1.19
HPS4-210ENST00000473782 HSPB8Q9UJY1 196 aa7.6□□□□□ -1.19
HPS4-210ENST00000473782 ZNF815PA8K554 130 aa7.59□□□□□ -1.19
HPS4-210ENST00000473782 H3BUT2 72 aa7.58□□□□□ -1.2
HPS4-210ENST00000473782 ANKRD39Q53RE8 183 aa7.55□□□□□ -1.2
HPS4-210ENST00000473782 hADV29S1A0JD25 119 aa7.54□□□□□ -1.2
HPS4-210ENST00000473782 A6NN06 94 aa7.54□□□□□ -1.2
HPS4-210ENST00000473782 LINC00313P59037 77 aa7.54□□□□□ -1.2
HPS4-210ENST00000473782 MTURNQ8N3F0 131 aa7.54□□□□□ -1.2
HPS4-210ENST00000473782 SS18L2Q9UHA2 77 aa7.54□□□□□ -1.2
HPS4-210ENST00000473782 COLCA2A8K830 154 aa7.53□□□□□ -1.2
HPS4-210ENST00000473782 MUSTN1Q8IVN3 82 aa7.52□□□□□ -1.21
HPS4-210ENST00000473782 IFITM1P13164 125 aa7.51□□□□□ -1.21
HPS4-210ENST00000473782 A0A087WSZ3 146 aa7.5□□□□□ -1.21
HPS4-210ENST00000473782 TRGC2P03986 189 aa7.49□□□□□ -1.21
HPS4-210ENST00000473782 MT1BP07438 61 aa7.48□□□□□ -1.21
HPS4-210ENST00000473782 TEN1Q86WV5 123 aa7.48□□□□□ -1.21
HPS4-210ENST00000473782 SYS1-DBNDD2H3BUS1 97 aa7.47□□□□□ -1.21
HPS4-210ENST00000473782 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.47□□□□□ -1.21
HPS4-210ENST00000473782 VAMP3Q15836 100 aa7.46□□□□□ -1.22
HPS4-210ENST00000473782 PPDPFLQ8WWR9 84 aa7.46□□□□□ -1.22
HPS4-210ENST00000473782 APOC3P02656 99 aa7.45□□□□□ -1.22
HPS4-210ENST00000473782 SPINK7P58062 85 aa7.45□□□□□ -1.22
HPS4-210ENST00000473782 LINC01545Q5VT33 79 aa7.45□□□□□ -1.22
HPS4-210ENST00000473782 SNHG12Q9BXW3 62 aa7.45□□□□□ -1.22
HPS4-210ENST00000473782 SCGB1D1O95968 90 aa7.44□□□□□ -1.22
HPS4-210ENST00000473782 COPS9Q8WXC6 57 aa7.44□□□□□ -1.22
HPS4-210ENST00000473782 SIGMAR1Q99720 223 aa7.44□□□□□ -1.22
HPS4-210ENST00000473782 SCGB1D4Q6XE38 83 aa7.43□□□□□ -1.22
HPS4-210ENST00000473782 SNAPINO95295 136 aa7.41□□□□□ -1.22
HPS4-210ENST00000473782 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
HPS4-210ENST00000473782 SVBPQ8N300 66 aa7.39□□□□□ -1.23
HPS4-210ENST00000473782 IGKV4-1P06312 121 aa7.38□□□□□ -1.23
HPS4-210ENST00000473782 A0A1W2PNM2 257 aa7.37□□□□□ -1.23
HPS4-210ENST00000473782 ZCCHC13Q8WW36 166 aaKnown RBP7.36□□□□□ -1.23
HPS4-210ENST00000473782 PET117Q6UWS5 81 aa7.35□□□□□ -1.23
HPS4-210ENST00000473782 WFDC13Q8IUB5 93 aa7.35□□□□□ -1.23
HPS4-210ENST00000473782 KRTAP2-2Q9BYT5 123 aa7.34□□□□□ -1.23
HPS4-210ENST00000473782 KRTAP2-1Q9BYU5 128 aa7.34□□□□□ -1.23
HPS4-210ENST00000473782 NDUFV3P56181 108 aaKnown RBP7.33□□□□□ -1.24
HPS4-210ENST00000473782 DEFB116Q30KQ4 102 aa7.33□□□□□ -1.24
HPS4-210ENST00000473782 FAM218AQ96MZ4 157 aa7.33□□□□□ -1.24
HPS4-210ENST00000473782 IGHV6-1A0A0B4J1U7 121 aa7.32□□□□□ -1.24
HPS4-210ENST00000473782 LINC00472Q9H8W2 130 aa7.32□□□□□ -1.24
HPS4-210ENST00000473782 GHRHP01286 108 aa7.31□□□□□ -1.24
HPS4-210ENST00000473782 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
HPS4-210ENST00000473782 C3orf79P0CE67 100 aa7.28□□□□□ -1.24
HPS4-210ENST00000473782 Q5VV11 94 aa7.28□□□□□ -1.24
HPS4-210ENST00000473782 H3BMG7 143 aa7.27□□□□□ -1.25
HPS4-210ENST00000473782 SPRR2EP22531 72 aa7.27□□□□□ -1.25
HPS4-210ENST00000473782 SPRR2BP35325 72 aa7.27□□□□□ -1.25
HPS4-210ENST00000473782 SPRR2AP35326 72 aa7.27□□□□□ -1.25
HPS4-210ENST00000473782 NDUFA5Q16718 116 aa7.27□□□□□ -1.25
HPS4-210ENST00000473782 SMCPP49901 116 aaPredicted RBP7.26□□□□□ -1.25
HPS4-210ENST00000473782 BVES-AS1Q5T3Y7 98 aa7.26□□□□□ -1.25
HPS4-210ENST00000473782 H1FX-AS1Q4G0G2 97 aa7.25□□□□□ -1.25
HPS4-210ENST00000473782 GPR98Q8WXG9 6306 aa7.23□□□□□ -1.25
HPS4-210ENST00000473782 C12orf57Q99622 126 aa7.23□□□□□ -1.25
HPS4-210ENST00000473782 A6NJY4 79 aa7.21□□□□□ -1.26
HPS4-210ENST00000473782 C8orf87E5RJ46 101 aa7.21□□□□□ -1.26
HPS4-210ENST00000473782 ATOH7Q8N100 152 aa7.21□□□□□ -1.26
HPS4-210ENST00000473782 SPRR2FQ96RM1 72 aa7.21□□□□□ -1.26
HPS4-210ENST00000473782 SPRR2GQ9BYE4 73 aa7.21□□□□□ -1.26
HPS4-210ENST00000473782 TRBV7-4A0A0J9YYF1 115 aa7.2□□□□□ -1.26
HPS4-210ENST00000473782 A0A1B0GVX0 72 aa7.2□□□□□ -1.26
HPS4-210ENST00000473782 RAB37Q96AX2 223 aa7.2□□□□□ -1.26
HPS4-210ENST00000473782 HIST1H2BKO60814 126 aa7.16□□□□□ -1.26
HPS4-210ENST00000473782 HIST1H2BJP06899 126 aa7.16□□□□□ -1.26
HPS4-210ENST00000473782 HIST1H2BOP23527 126 aa7.16□□□□□ -1.26
HPS4-210ENST00000473782 HIST1H2BBP33778 126 aa7.16□□□□□ -1.26
HPS4-210ENST00000473782 HIST1H2BDP58876 126 aa7.16□□□□□ -1.26
HPS4-210ENST00000473782 KRTDAPP60985 99 aa7.16□□□□□ -1.26
HPS4-210ENST00000473782 HIST1H2BCP62807 126 aa7.16□□□□□ -1.26
HPS4-210ENST00000473782 HIST2H2BEQ16778 126 aa7.16□□□□□ -1.26
HPS4-210ENST00000473782 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.16□□□□□ -1.26
HPS4-210ENST00000473782 HIST1H2BHQ93079 126 aa7.16□□□□□ -1.26
HPS4-210ENST00000473782 HIST1H2BNQ99877 126 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms