RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 C1orf137Q5JT78 98 aa3.82□□□□□ -1.8
CLK1-210ENST00000473565 KRTAP13-1Q8IUC0 172 aa3.82□□□□□ -1.8
CLK1-210ENST00000473565 CIRBP-AS1Q8TBR5 109 aa3.82□□□□□ -1.8
CLK1-210ENST00000473565 A0A1W2PNM2 257 aa3.81□□□□□ -1.8
CLK1-210ENST00000473565 SCXQ7RTU7 201 aa3.81□□□□□ -1.8
CLK1-210ENST00000473565 A0A087WVE0 104 aa3.81□□□□□ -1.8
CLK1-210ENST00000473565 ANAPC11Q9NYG5 84 aa3.81□□□□□ -1.8
CLK1-210ENST00000473565 VPS13BQ7Z7G8 4022 aa3.81□□□□□ -1.8
CLK1-210ENST00000473565 LCE6AA0A183 80 aa3.8□□□□□ -1.8
CLK1-210ENST00000473565 Q6ZVQ6 151 aa3.8□□□□□ -1.8
CLK1-210ENST00000473565 TRBV7-7A0A0K0K1E9 115 aa3.8□□□□□ -1.8
CLK1-210ENST00000473565 H0Y9J4 135 aa3.8□□□□□ -1.8
CLK1-210ENST00000473565 UBL5Q9BZL1 73 aa3.8□□□□□ -1.8
CLK1-210ENST00000473565 PDE6GP18545 87 aa3.8□□□□□ -1.8
CLK1-210ENST00000473565 F8WEM9 126 aa3.79□□□□□ -1.8
CLK1-210ENST00000473565 Q6JHZ5 121 aa3.79□□□□□ -1.8
CLK1-210ENST00000473565 RYR3Q15413 4870 aa3.79□□□□□ -1.8
CLK1-210ENST00000473565 SCGB1A1P11684 91 aa3.79□□□□□ -1.8
CLK1-210ENST00000473565 HIST1H4AP62805 103 aaKnown RBP3.79□□□□□ -1.8
CLK1-210ENST00000473565 IGFL1Q6UW32 110 aa3.79□□□□□ -1.8
CLK1-210ENST00000473565 FAM236AA0A1B0GUQ0 79 aa3.78□□□□□ -1.8
CLK1-210ENST00000473565 FAM236BA0A1B0GV22 79 aa3.78□□□□□ -1.8
CLK1-210ENST00000473565 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
CLK1-210ENST00000473565 Q8N9L7 120 aa3.78□□□□□ -1.81
CLK1-210ENST00000473565 Q8NBF4 154 aa3.78□□□□□ -1.81
CLK1-210ENST00000473565 Q6Q795 121 aa3.77□□□□□ -1.81
CLK1-210ENST00000473565 Q6ZSA8 131 aa3.77□□□□□ -1.81
CLK1-210ENST00000473565 SPRR4Q96PI1 79 aa3.77□□□□□ -1.81
CLK1-210ENST00000473565 FAT1Q14517 4588 aa3.77□□□□□ -1.81
CLK1-210ENST00000473565 ZNF861PO60384 105 aa3.77□□□□□ -1.81
CLK1-210ENST00000473565 APOBP04114 4563 aaKnown RBP3.76□□□□□ -1.81
CLK1-210ENST00000473565 IGLV7-43P04211 117 aa3.76□□□□□ -1.81
CLK1-210ENST00000473565 SPRR1BP22528 89 aa3.76□□□□□ -1.81
CLK1-210ENST00000473565 NREPQ16612 68 aa3.76□□□□□ -1.81
CLK1-210ENST00000473565 DEFB116Q30KQ4 102 aa3.76□□□□□ -1.81
CLK1-210ENST00000473565 C9orf153Q5TBE3 101 aa3.76□□□□□ -1.81
CLK1-210ENST00000473565 ANAPC13Q9BS18 74 aa3.76□□□□□ -1.81
CLK1-210ENST00000473565 A0A087WSZ3 146 aa3.75□□□□□ -1.81
CLK1-210ENST00000473565 HRCT1Q6UXD1 115 aa3.75□□□□□ -1.81
CLK1-210ENST00000473565 IMUPQ9GZP8 106 aa3.75□□□□□ -1.81
CLK1-210ENST00000473565 IGLV8-61A0A075B6I0 122 aa3.74□□□□□ -1.81
CLK1-210ENST00000473565 BPY2O14599 106 aa3.74□□□□□ -1.81
CLK1-210ENST00000473565 CRYGAP11844 174 aa3.74□□□□□ -1.81
CLK1-210ENST00000473565 MOBPQ13875 183 aa3.74□□□□□ -1.81
CLK1-210ENST00000473565 ATP5EP2Q5VTU8 51 aa3.74□□□□□ -1.81
CLK1-210ENST00000473565 SMR3BP02814 79 aaPredicted RBP3.73□□□□□ -1.81
CLK1-210ENST00000473565 A0A1B0GVY2 172 aa3.73□□□□□ -1.81
CLK1-210ENST00000473565 LINC00483Q53H64 154 aa3.72□□□□□ -1.81
CLK1-210ENST00000473565 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
CLK1-210ENST00000473565 CXCL6P80162 114 aa3.72□□□□□ -1.81
CLK1-210ENST00000473565 LINC00336Q6ZUF6 198 aa3.72□□□□□ -1.81
CLK1-210ENST00000473565 ZNF706Q9Y5V0 76 aaPredicted RBP3.72□□□□□ -1.81
CLK1-210ENST00000473565 IGKV4-1P06312 121 aa3.7□□□□□ -1.82
CLK1-210ENST00000473565 RPL37AP61513 92 aaKnown RBP3.7□□□□□ -1.82
CLK1-210ENST00000473565 DSCR10P59022 87 aa3.7□□□□□ -1.82
CLK1-210ENST00000473565 A0A087X002 238 aa3.7□□□□□ -1.82
CLK1-210ENST00000473565 K7EQZ3 153 aa3.69□□□□□ -1.82
CLK1-210ENST00000473565 A0A1B0GW54 56 aa3.68□□□□□ -1.82
CLK1-210ENST00000473565 ATOX1O00244 68 aa3.68□□□□□ -1.82
CLK1-210ENST00000473565 KRTAP13-2Q52LG2 175 aa3.67□□□□□ -1.82
CLK1-210ENST00000473565 KRTAP1-4P0C5Y4 121 aa3.66□□□□□ -1.82
CLK1-210ENST00000473565 LINC00472Q9H8W2 130 aa3.66□□□□□ -1.82
CLK1-210ENST00000473565 EPPK1P58107 5090 aaKnown RBP3.66□□□□□ -1.82
CLK1-210ENST00000473565 HSPG2P98160 4391 aa3.66□□□□□ -1.82
CLK1-210ENST00000473565 WFDC13Q8IUB5 93 aa3.65□□□□□ -1.83
CLK1-210ENST00000473565 Q96NJ1 140 aa3.65□□□□□ -1.83
CLK1-210ENST00000473565 CYSTM1Q9H1C7 97 aa3.65□□□□□ -1.83
CLK1-210ENST00000473565 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.83
CLK1-210ENST00000473565 COX7CP15954 63 aa3.65□□□□□ -1.83
CLK1-210ENST00000473565 PLA2G1BP04054 148 aaKnown RBP3.64□□□□□ -1.83
CLK1-210ENST00000473565 SPINK6Q6UWN8 80 aa3.64□□□□□ -1.83
CLK1-210ENST00000473565 SERP2Q8N6R1 65 aa3.64□□□□□ -1.83
CLK1-210ENST00000473565 RYR1P21817 5038 aa3.64□□□□□ -1.83
CLK1-210ENST00000473565 LRP1Q07954 4544 aaKnown RBP3.63□□□□□ -1.83
CLK1-210ENST00000473565 UQCRQO14949 82 aa3.63□□□□□ -1.83
CLK1-210ENST00000473565 KRTAP10-4P60372 401 aaPredicted RBP3.63□□□□□ -1.83
CLK1-210ENST00000473565 PRR26Q8N8Z3 221 aa3.63□□□□□ -1.83
CLK1-210ENST00000473565 A8MWP4 228 aa3.62□□□□□ -1.83
CLK1-210ENST00000473565 HCG22E2RYF7 251 aa3.62□□□□□ -1.83
CLK1-210ENST00000473565 SSBP3-AS1Q7Z2R9 100 aa3.62□□□□□ -1.83
CLK1-210ENST00000473565 C20orf197Q8N268 126 aa3.62□□□□□ -1.83
CLK1-210ENST00000473565 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
CLK1-210ENST00000473565 PRR15Q8IV56 129 aa3.61□□□□□ -1.83
CLK1-210ENST00000473565 SS18L2Q9UHA2 77 aa3.61□□□□□ -1.83
CLK1-210ENST00000473565 TRAV7A0A075B6U4 112 aa3.61□□□□□ -1.83
CLK1-210ENST00000473565 FAM229BQ4G0N7 80 aa3.61□□□□□ -1.83
CLK1-210ENST00000473565 FLG2Q5D862 2391 aaPredicted RBP3.61□□□□□ -1.83
CLK1-210ENST00000473565 IGHV6-1A0A0B4J1U7 121 aa3.61□□□□□ -1.83
CLK1-210ENST00000473565 OCR1Q9BZK8 76 aa3.61□□□□□ -1.83
CLK1-210ENST00000473565 SNURFQ9Y675 71 aa3.61□□□□□ -1.83
CLK1-210ENST00000473565 NOTCH2NLQ7Z3S9 236 aa3.6□□□□□ -1.83
CLK1-210ENST00000473565 TYMSOSQ8TAI1 123 aa3.6□□□□□ -1.83
CLK1-210ENST00000473565 KRTAP17-1Q9BYP8 105 aa3.6□□□□□ -1.83
CLK1-210ENST00000473565 MMP24-AS1A0A0U1RRL7 71 aa3.59□□□□□ -1.83
CLK1-210ENST00000473565 CASC2Q6XLA1 102 aa3.59□□□□□ -1.83
CLK1-210ENST00000473565 KRTAP29-1A8MX34 341 aaPredicted RBP3.58□□□□□ -1.84
CLK1-210ENST00000473565 J3KT08 172 aa3.58□□□□□ -1.84
CLK1-210ENST00000473565 NDUFB1O75438 58 aa3.58□□□□□ -1.84
CLK1-210ENST00000473565 MYCBP2O75592 4640 aa3.58□□□□□ -1.84
CLK1-210ENST00000473565 CD164Q04900 197 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms