RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 HIST1H2BNQ99877 126 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 HIST1H2BMQ99879 126 aa4.79□□□□□ -1.64
VCL-204ENST00000472585 TEX49A0A1B0GTD5 131 aa4.78□□□□□ -1.64
VCL-204ENST00000472585 HSBP1O75506 76 aa4.78□□□□□ -1.64
VCL-204ENST00000472585 LGALS3P17931 250 aaKnown RBP4.78□□□□□ -1.64
VCL-204ENST00000472585 HINT1P49773 126 aaPredicted RBP4.78□□□□□ -1.64
VCL-204ENST00000472585 AKR1D1P51857 326 aa4.78□□□□□ -1.64
VCL-204ENST00000472585 TAL2Q16559 108 aa4.78□□□□□ -1.64
VCL-204ENST00000472585 OR13C6PQ8NH95 151 aa4.78□□□□□ -1.64
VCL-204ENST00000472585 C12orf57Q99622 126 aa4.78□□□□□ -1.64
VCL-204ENST00000472585 C20orf202A1L168 122 aa4.77□□□□□ -1.65
VCL-204ENST00000472585 DPM2O94777 84 aa4.77□□□□□ -1.65
VCL-204ENST00000472585 COX7BP24311 80 aa4.77□□□□□ -1.65
VCL-204ENST00000472585 C6orf99Q4VX62 202 aa4.77□□□□□ -1.65
VCL-204ENST00000472585 COA6Q5JTJ3 125 aaKnown RBP4.77□□□□□ -1.65
VCL-204ENST00000472585 IGLV5-48A0A075B6I7 105 aa4.76□□□□□ -1.65
VCL-204ENST00000472585 SERF1AO75920 110 aa4.76□□□□□ -1.65
VCL-204ENST00000472585 LEPROTL1O95214 131 aa4.76□□□□□ -1.65
VCL-204ENST00000472585 IGKCP01834 107 aa4.76□□□□□ -1.65
VCL-204ENST00000472585 MT2AP02795 61 aa4.76□□□□□ -1.65
VCL-204ENST00000472585 PLNP26678 52 aa4.76□□□□□ -1.65
VCL-204ENST00000472585 ATP11AUNQ6ZP68 121 aa4.76□□□□□ -1.65
VCL-204ENST00000472585 HIST3H2BBQ8N257 126 aa4.76□□□□□ -1.65
VCL-204ENST00000472585 SPANXCQ9NY87 97 aa4.76□□□□□ -1.65
VCL-204ENST00000472585 FABP4P15090 132 aa4.75□□□□□ -1.65
VCL-204ENST00000472585 E9PLD3 99 aa4.74□□□□□ -1.65
VCL-204ENST00000472585 MT1FP04733 61 aa4.74□□□□□ -1.65
VCL-204ENST00000472585 HERVK_113P61574 105 aa4.74□□□□□ -1.65
VCL-204ENST00000472585 KRTAP6-3Q3LI67 103 aa4.74□□□□□ -1.65
VCL-204ENST00000472585 SPANXDQ9BXN6 97 aa4.74□□□□□ -1.65
VCL-204ENST00000472585 TTTY13Q9BZ97 58 aa4.73□□□□□ -1.65
VCL-204ENST00000472585 S100A2P29034 98 aa4.72□□□□□ -1.65
VCL-204ENST00000472585 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
VCL-204ENST00000472585 PYY3Q5JQD4 70 aa4.72□□□□□ -1.65
VCL-204ENST00000472585 Q75L30 129 aa4.72□□□□□ -1.65
VCL-204ENST00000472585 OBSCN-AS1Q96MR7 158 aa4.72□□□□□ -1.65
VCL-204ENST00000472585 HIST1H2BLQ99880 126 aa4.72□□□□□ -1.65
VCL-204ENST00000472585 CBY1Q9Y3M2 126 aa4.72□□□□□ -1.65
VCL-204ENST00000472585 TRBV20-1A0A075B6N2 111 aa4.71□□□□□ -1.66
VCL-204ENST00000472585 TRBV7-6A0A0J9YX20 115 aa4.71□□□□□ -1.66
VCL-204ENST00000472585 TIMM17BO60830 172 aa4.71□□□□□ -1.66
VCL-204ENST00000472585 TCL1BO95988 128 aa4.7□□□□□ -1.66
VCL-204ENST00000472585 PCP2Q8IVA1 136 aa4.7□□□□□ -1.66
VCL-204ENST00000472585 HSPB8Q9UJY1 196 aa4.7□□□□□ -1.66
VCL-204ENST00000472585 PCP4L1A6NKN8 68 aa4.69□□□□□ -1.66
VCL-204ENST00000472585 A0A1B0GWB2 263 aa4.68□□□□□ -1.66
VCL-204ENST00000472585 KRTAP16-1A8MUX0 517 aa4.68□□□□□ -1.66
VCL-204ENST00000472585 KRTAP19-6Q3LI70 58 aa4.68□□□□□ -1.66
VCL-204ENST00000472585 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
VCL-204ENST00000472585 TRBV7-7A0A0K0K1E9 115 aa4.66□□□□□ -1.66
VCL-204ENST00000472585 ZNF815PA8K554 130 aa4.66□□□□□ -1.66
VCL-204ENST00000472585 SYS1-DBNDD2H3BUS1 97 aa4.66□□□□□ -1.66
VCL-204ENST00000472585 IGFL1Q6UW32 110 aa4.66□□□□□ -1.66
VCL-204ENST00000472585 Q96NJ1 140 aa4.66□□□□□ -1.66
VCL-204ENST00000472585 FAM236DA0A1B0GTK5 79 aa4.65□□□□□ -1.67
VCL-204ENST00000472585 FAM236CP0DP71 79 aa4.65□□□□□ -1.67
VCL-204ENST00000472585 C20orf166-AS1Q96NR2 134 aa4.65□□□□□ -1.67
VCL-204ENST00000472585 A6NDN8 102 aa4.64□□□□□ -1.67
VCL-204ENST00000472585 A8MUU9 505 aa4.64□□□□□ -1.67
VCL-204ENST00000472585 LINC01545Q5VT33 79 aa4.64□□□□□ -1.67
VCL-204ENST00000472585 SMIM11BQ8TCY0 68 aa4.64□□□□□ -1.67
VCL-204ENST00000472585 MUSTN1Q8IVN3 82 aa4.63□□□□□ -1.67
VCL-204ENST00000472585 TSTD3H0UI37 97 aa4.62□□□□□ -1.67
VCL-204ENST00000472585 A4D1N5 150 aa4.61□□□□□ -1.67
VCL-204ENST00000472585 C3orf79P0CE67 100 aa4.61□□□□□ -1.67
VCL-204ENST00000472585 KRTAP20-1Q3LI63 56 aa4.61□□□□□ -1.67
VCL-204ENST00000472585 OCIAD2Q56VL3 154 aa4.61□□□□□ -1.67
VCL-204ENST00000472585 LINC00575Q6W349 94 aa4.61□□□□□ -1.67
VCL-204ENST00000472585 MPLKIPQ8TAP9 179 aa4.61□□□□□ -1.67
VCL-204ENST00000472585 CLEC2BQ92478 149 aa4.61□□□□□ -1.67
VCL-204ENST00000472585 Q6JHZ5 121 aa4.6□□□□□ -1.67
VCL-204ENST00000472585 PET117Q6UWS5 81 aa4.6□□□□□ -1.67
VCL-204ENST00000472585 C14orf144Q96I85 54 aa4.6□□□□□ -1.67
VCL-204ENST00000472585 NEBP20929 6669 aa4.59□□□□□ -1.67
VCL-204ENST00000472585 HRES1P13985 223 aa4.59□□□□□ -1.67
VCL-204ENST00000472585 Q6ZQY7 126 aa4.59□□□□□ -1.67
VCL-204ENST00000472585 F8WEM9 126 aa4.58□□□□□ -1.68
VCL-204ENST00000472585 SCGB1D1O95968 90 aa4.58□□□□□ -1.68
VCL-204ENST00000472585 IFITM1P13164 125 aa4.58□□□□□ -1.68
VCL-204ENST00000472585 KRTDAPP60985 99 aa4.58□□□□□ -1.68
VCL-204ENST00000472585 NHP2Q9NX24 153 aaKnown RBP4.58□□□□□ -1.68
VCL-204ENST00000472585 H3BUT2 72 aa4.57□□□□□ -1.68
VCL-204ENST00000472585 LST1O00453 97 aa4.57□□□□□ -1.68
VCL-204ENST00000472585 SCGB1D4Q6XE38 83 aa4.57□□□□□ -1.68
VCL-204ENST00000472585 RBM12B-AS1Q9P1G2 102 aa4.57□□□□□ -1.68
VCL-204ENST00000472585 hADV29S1A0JD25 119 aa4.56□□□□□ -1.68
VCL-204ENST00000472585 DSCR10P59022 87 aa4.56□□□□□ -1.68
VCL-204ENST00000472585 TRAV13-2A0A0B4J235 113 aa4.55□□□□□ -1.68
VCL-204ENST00000472585 Q6ZVH6 145 aa4.55□□□□□ -1.68
VCL-204ENST00000472585 NOTCH2NLQ7Z3S9 236 aa4.55□□□□□ -1.68
VCL-204ENST00000472585 VAMP8Q9BV40 100 aa4.55□□□□□ -1.68
VCL-204ENST00000472585 ATOH7Q8N100 152 aa4.54□□□□□ -1.68
VCL-204ENST00000472585 SNHG12Q9BXW3 62 aa4.53□□□□□ -1.68
VCL-204ENST00000472585 M0R143 59 aa4.52□□□□□ -1.69
VCL-204ENST00000472585 VAMP3Q15836 100 aa4.52□□□□□ -1.69
VCL-204ENST00000472585 PAM16Q9Y3D7 125 aa4.52□□□□□ -1.69
VCL-204ENST00000472585 SPATA45Q537H7 98 aa4.51□□□□□ -1.69
VCL-204ENST00000472585 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.51□□□□□ -1.69
VCL-204ENST00000472585 COPS9Q8WXC6 57 aa4.51□□□□□ -1.69
VCL-204ENST00000472585 UQCR10Q9UDW1 63 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms