RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 LAMTOR3Q9UHA4 124 aa3.16□□□□□ -1.9
GPNMB-208ENST00000470994 HSPB8Q9UJY1 196 aa3.16□□□□□ -1.9
GPNMB-208ENST00000470994 SERF1AO75920 110 aa3.15□□□□□ -1.91
GPNMB-208ENST00000470994 TRGC2P03986 189 aa3.15□□□□□ -1.91
GPNMB-208ENST00000470994 ADAMTSL4-AS1Q5T5F5 129 aa3.15□□□□□ -1.91
GPNMB-208ENST00000470994 SLC25A34Q6PIV7 304 aa3.15□□□□□ -1.91
GPNMB-208ENST00000470994 SOSTDC1Q6X4U4 206 aa3.15□□□□□ -1.91
GPNMB-208ENST00000470994 LIMD2Q9BT23 127 aa3.15□□□□□ -1.91
GPNMB-208ENST00000470994 CBY1Q9Y3M2 126 aa3.15□□□□□ -1.91
GPNMB-208ENST00000470994 A0A0J9YXY3 114 aa3.14□□□□□ -1.91
GPNMB-208ENST00000470994 H7C2G1 150 aa3.14□□□□□ -1.91
GPNMB-208ENST00000470994 M0R2T5 61 aa3.14□□□□□ -1.91
GPNMB-208ENST00000470994 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
GPNMB-208ENST00000470994 Q1RN00 199 aa3.14□□□□□ -1.91
GPNMB-208ENST00000470994 DHRS4-AS1Q9P1J3 65 aa3.14□□□□□ -1.91
GPNMB-208ENST00000470994 C5orf52A6NGY3 159 aa3.13□□□□□ -1.91
GPNMB-208ENST00000470994 COX7BP24311 80 aa3.13□□□□□ -1.91
GPNMB-208ENST00000470994 COX6B2Q6YFQ2 88 aa3.13□□□□□ -1.91
GPNMB-208ENST00000470994 LINC00308Q8TCZ7 52 aa3.13□□□□□ -1.91
GPNMB-208ENST00000470994 YPEL4Q96NS1 127 aa3.13□□□□□ -1.91
GPNMB-208ENST00000470994 MT1HP80294 61 aa3.12□□□□□ -1.91
GPNMB-208ENST00000470994 SVIPQ8NHG7 77 aa3.12□□□□□ -1.91
GPNMB-208ENST00000470994 PRO1933Q9H354 126 aa3.12□□□□□ -1.91
GPNMB-208ENST00000470994 SPANXCQ9NY87 97 aa3.12□□□□□ -1.91
GPNMB-208ENST00000470994 A0A0G2JQZ4 141 aa3.11□□□□□ -1.91
GPNMB-208ENST00000470994 E9PLD3 99 aa3.11□□□□□ -1.91
GPNMB-208ENST00000470994 SPRR1BP22528 89 aa3.11□□□□□ -1.91
GPNMB-208ENST00000470994 AKR1D1P51857 326 aa3.11□□□□□ -1.91
GPNMB-208ENST00000470994 C6orf99Q4VX62 202 aa3.11□□□□□ -1.91
GPNMB-208ENST00000470994 LINC00518Q8N0U6 118 aa3.11□□□□□ -1.91
GPNMB-208ENST00000470994 SPANXDQ9BXN6 97 aa3.11□□□□□ -1.91
GPNMB-208ENST00000470994 TEX49A0A1B0GTD5 131 aa3.1□□□□□ -1.91
GPNMB-208ENST00000470994 A6NDN8 102 aa3.1□□□□□ -1.91
GPNMB-208ENST00000470994 ZNF815PA8K554 130 aa3.1□□□□□ -1.91
GPNMB-208ENST00000470994 SYS1-DBNDD2H3BUS1 97 aa3.09□□□□□ -1.91
GPNMB-208ENST00000470994 TIMM17BO60830 172 aa3.09□□□□□ -1.91
GPNMB-208ENST00000470994 ELOF1P60002 83 aaKnown RBP3.09□□□□□ -1.91
GPNMB-208ENST00000470994 CD164Q04900 197 aa3.09□□□□□ -1.91
GPNMB-208ENST00000470994 KRTAP19-2Q3LHN2 52 aa3.09□□□□□ -1.91
GPNMB-208ENST00000470994 C1orf195Q5TG92 126 aa3.09□□□□□ -1.91
GPNMB-208ENST00000470994 Q6Q795 121 aa3.09□□□□□ -1.91
GPNMB-208ENST00000470994 SCGB1D4Q6XE38 83 aa3.09□□□□□ -1.91
GPNMB-208ENST00000470994 TTTY13Q9BZ97 58 aa3.09□□□□□ -1.91
GPNMB-208ENST00000470994 A0A1B0GWB2 263 aa3.07□□□□□ -1.92
GPNMB-208ENST00000470994 COLCA2A8K830 154 aa3.07□□□□□ -1.92
GPNMB-208ENST00000470994 TCL1BO95988 128 aa3.07□□□□□ -1.92
GPNMB-208ENST00000470994 RPL37P61927 97 aaKnown RBP3.07□□□□□ -1.92
GPNMB-208ENST00000470994 PET117Q6UWS5 81 aa3.07□□□□□ -1.92
GPNMB-208ENST00000470994 PCP2Q8IVA1 136 aa3.07□□□□□ -1.92
GPNMB-208ENST00000470994 F8WEM9 126 aa3.06□□□□□ -1.92
GPNMB-208ENST00000470994 KRTDAPP60985 99 aa3.06□□□□□ -1.92
GPNMB-208ENST00000470994 COPS9Q8WXC6 57 aa3.06□□□□□ -1.92
GPNMB-208ENST00000470994 TRBV7-6A0A0J9YX20 115 aa3.05□□□□□ -1.92
GPNMB-208ENST00000470994 LINC01545Q5VT33 79 aa3.05□□□□□ -1.92
GPNMB-208ENST00000470994 Q5XG85 94 aa3.05□□□□□ -1.92
GPNMB-208ENST00000470994 MUSTN1Q8IVN3 82 aa3.05□□□□□ -1.92
GPNMB-208ENST00000470994 SLC7A5P1Q8MH63 180 aa3.05□□□□□ -1.92
GPNMB-208ENST00000470994 NHP2Q9NX24 153 aaKnown RBP3.05□□□□□ -1.92
GPNMB-208ENST00000470994 A4D1N5 150 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 HIST1H2BKO60814 126 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 HIST1H2BJP06899 126 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 C3orf79P0CE67 100 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 IFITM1P13164 125 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 HIST1H2BOP23527 126 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 HIST1H2BBP33778 126 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 HIST1H2BDP58876 126 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 HIST1H2BCP62807 126 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 VAMP3Q15836 100 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 HIST2H2BEQ16778 126 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.04□□□□□ -1.92
GPNMB-208ENST00000470994 ATP11AUNQ6ZP68 121 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 ATOH7Q8N100 152 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 HIST1H2BHQ93079 126 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 HIST1H2BNQ99877 126 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 HIST1H2BMQ99879 126 aa3.04□□□□□ -1.92
GPNMB-208ENST00000470994 IGLV5-48A0A075B6I7 105 aa3.03□□□□□ -1.92
GPNMB-208ENST00000470994 TRAV13-2A0A0B4J235 113 aa3.03□□□□□ -1.92
GPNMB-208ENST00000470994 C20orf202A1L168 122 aa3.03□□□□□ -1.92
GPNMB-208ENST00000470994 SMIM11BQ8TCY0 68 aa3.03□□□□□ -1.92
GPNMB-208ENST00000470994 OBSCN-AS1Q96MR7 158 aa3.03□□□□□ -1.92
GPNMB-208ENST00000470994 Q6ZVH6 145 aa3.02□□□□□ -1.93
GPNMB-208ENST00000470994 hADV29S1A0JD25 119 aa3.01□□□□□ -1.93
GPNMB-208ENST00000470994 OCIAD2Q56VL3 154 aa3.01□□□□□ -1.93
GPNMB-208ENST00000470994 Q6JHZ5 121 aa3.01□□□□□ -1.93
GPNMB-208ENST00000470994 Q96NJ1 140 aa3.01□□□□□ -1.93
GPNMB-208ENST00000470994 SNHG12Q9BXW3 62 aa3.01□□□□□ -1.93
GPNMB-208ENST00000470994 TRBV7-7A0A0K0K1E9 115 aa3□□□□□ -1.93
GPNMB-208ENST00000470994 LST1O00453 97 aa3□□□□□ -1.93
GPNMB-208ENST00000470994 IGFL1Q6UW32 110 aa3□□□□□ -1.93
GPNMB-208ENST00000470994 LINC00575Q6W349 94 aa3□□□□□ -1.93
GPNMB-208ENST00000470994 Q6ZQY7 126 aa3□□□□□ -1.93
GPNMB-208ENST00000470994 H3BUT2 72 aa2.99□□□□□ -1.93
GPNMB-208ENST00000470994 CLEC2BQ92478 149 aa2.99□□□□□ -1.93
GPNMB-208ENST00000470994 TRBV20-1A0A075B6N2 111 aa2.98□□□□□ -1.93
GPNMB-208ENST00000470994 Q75L30 129 aa2.98□□□□□ -1.93
GPNMB-208ENST00000470994 HSBP1L1C9JCN9 74 aa2.97□□□□□ -1.93
GPNMB-208ENST00000470994 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.97□□□□□ -1.93
GPNMB-208ENST00000470994 C12orf57Q99622 126 aa2.97□□□□□ -1.93
GPNMB-208ENST00000470994 FAM236DA0A1B0GTK5 79 aa2.96□□□□□ -1.94
GPNMB-208ENST00000470994 SNCGO76070 127 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms