RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PLAC8Q9NZF1 115 aa2.19□□□□□ -2.06
COL9A1-206ENST00000470652 FLG2Q5D862 2391 aaPredicted RBP2.18□□□□□ -2.06
COL9A1-206ENST00000470652 TRBV10-3A0A0K0K1G6 114 aa2.18□□□□□ -2.06
COL9A1-206ENST00000470652 H7C2G1 150 aa2.18□□□□□ -2.06
COL9A1-206ENST00000470652 HINT1P49773 126 aaPredicted RBP2.18□□□□□ -2.06
COL9A1-206ENST00000470652 PRLHP81277 87 aa2.18□□□□□ -2.06
COL9A1-206ENST00000470652 MIEN1Q9BRT3 115 aa2.18□□□□□ -2.06
COL9A1-206ENST00000470652 SPANXDQ9BXN6 97 aa2.18□□□□□ -2.06
COL9A1-206ENST00000470652 SPANXCQ9NY87 97 aa2.18□□□□□ -2.06
COL9A1-206ENST00000470652 PSORS1C2Q9UIG4 136 aa2.18□□□□□ -2.06
COL9A1-206ENST00000470652 LINC00587B1AMM8 73 aa2.17□□□□□ -2.06
COL9A1-206ENST00000470652 M0R378 163 aa2.17□□□□□ -2.06
COL9A1-206ENST00000470652 DLEU1O43261 78 aa2.17□□□□□ -2.06
COL9A1-206ENST00000470652 TIMM17BO60830 172 aa2.17□□□□□ -2.06
COL9A1-206ENST00000470652 ERC2-IT1O76042 136 aa2.17□□□□□ -2.06
COL9A1-206ENST00000470652 S100A12P80511 92 aa2.17□□□□□ -2.06
COL9A1-206ENST00000470652 BATFQ16520 125 aa2.17□□□□□ -2.06
COL9A1-206ENST00000470652 Q5VSD8 79 aa2.17□□□□□ -2.06
COL9A1-206ENST00000470652 MRPL55Q7Z7F7 128 aaKnown RBP2.17□□□□□ -2.06
COL9A1-206ENST00000470652 SPANXB1Q9NS25 103 aaPredicted RBP2.17□□□□□ -2.06
COL9A1-206ENST00000470652 UQCR10Q9UDW1 63 aa2.17□□□□□ -2.06
COL9A1-206ENST00000470652 HERC1Q15751 4861 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 IGLV1-50A0A075B6I6 118 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 A6NDN8 102 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 DDTP30046 118 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 RPL13AP40429 203 aaKnown RBP2.16□□□□□ -2.06
COL9A1-206ENST00000470652 UBE2AP49459 152 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 RPL37AP61513 92 aaKnown RBP2.16□□□□□ -2.06
COL9A1-206ENST00000470652 UBE2BP63146 152 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 COX17Q14061 63 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 C1orf137Q5JT78 98 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 BVES-AS1Q5T3Y7 98 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 OR13C6PQ8NH95 151 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 RAB37Q96AX2 223 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 NHP2Q9NX24 153 aaKnown RBP2.16□□□□□ -2.06
COL9A1-206ENST00000470652 HIGD1BQ9P298 99 aa2.16□□□□□ -2.06
COL9A1-206ENST00000470652 LOC107984156A0A0G2JMH3 177 aa2.15□□□□□ -2.07
COL9A1-206ENST00000470652 IGLV6-57P01721 117 aa2.15□□□□□ -2.07
COL9A1-206ENST00000470652 HSD52Q0P140 79 aa2.15□□□□□ -2.07
COL9A1-206ENST00000470652 ARL17AQ8IVW1 177 aa2.15□□□□□ -2.07
COL9A1-206ENST00000470652 ST20-AS1Q8NBB2 130 aa2.15□□□□□ -2.07
COL9A1-206ENST00000470652 SMIM11BQ8TCY0 68 aa2.15□□□□□ -2.07
COL9A1-206ENST00000470652 Q9BRP9 147 aa2.15□□□□□ -2.07
COL9A1-206ENST00000470652 SNHG12Q9BXW3 62 aa2.15□□□□□ -2.07
COL9A1-206ENST00000470652 TMEM126AQ9H061 195 aa2.15□□□□□ -2.07
COL9A1-206ENST00000470652 TRAV23DV6A0A075B6W5 121 aa2.14□□□□□ -2.07
COL9A1-206ENST00000470652 A0A0G2JQZ4 141 aa2.14□□□□□ -2.07
COL9A1-206ENST00000470652 TSTD3H0UI37 97 aa2.14□□□□□ -2.07
COL9A1-206ENST00000470652 TSPAN13O95857 204 aa2.14□□□□□ -2.07
COL9A1-206ENST00000470652 C6orf99Q4VX62 202 aa2.14□□□□□ -2.07
COL9A1-206ENST00000470652 S100A7L2Q5SY68 101 aa2.14□□□□□ -2.07
COL9A1-206ENST00000470652 FAM19A1Q7Z5A9 133 aa2.14□□□□□ -2.07
COL9A1-206ENST00000470652 KRTAP13-1Q8IUC0 172 aa2.14□□□□□ -2.07
COL9A1-206ENST00000470652 SMCR5Q8TEV8 140 aa2.14□□□□□ -2.07
COL9A1-206ENST00000470652 CLEC2BQ92478 149 aa2.14□□□□□ -2.07
COL9A1-206ENST00000470652 A0A1B0GV72 72 aa2.13□□□□□ -2.07
COL9A1-206ENST00000470652 BCE1O60756 84 aa2.13□□□□□ -2.07
COL9A1-206ENST00000470652 NDUFC2O95298 119 aa2.13□□□□□ -2.07
COL9A1-206ENST00000470652 IGLV7-43P04211 117 aa2.13□□□□□ -2.07
COL9A1-206ENST00000470652 IFITM1P13164 125 aa2.13□□□□□ -2.07
COL9A1-206ENST00000470652 SPRR1AP35321 89 aa2.13□□□□□ -2.07
COL9A1-206ENST00000470652 HIGD2AQ9BW72 106 aa2.13□□□□□ -2.07
COL9A1-206ENST00000470652 KCNQ1DNQ9H478 68 aa2.13□□□□□ -2.07
COL9A1-206ENST00000470652 LINC00474Q9P2X8 69 aa2.13□□□□□ -2.07
COL9A1-206ENST00000470652 LPAP08519 4548 aa2.12□□□□□ -2.07
COL9A1-206ENST00000470652 A0A0B4J2C4 111 aa2.12□□□□□ -2.07
COL9A1-206ENST00000470652 TRBV10-2A0A0K0K1G8 114 aa2.12□□□□□ -2.07
COL9A1-206ENST00000470652 TAX1BP3O14907 124 aa2.12□□□□□ -2.07
COL9A1-206ENST00000470652 ZNF73O43830 326 aaPredicted RBP2.12□□□□□ -2.07
COL9A1-206ENST00000470652 TAL2Q16559 108 aa2.12□□□□□ -2.07
COL9A1-206ENST00000470652 C3orf22Q8N5N4 141 aa2.12□□□□□ -2.07
COL9A1-206ENST00000470652 PRO1854Q9UHT4 67 aa2.12□□□□□ -2.07
COL9A1-206ENST00000470652 HMCN2Q8NDA2 5059 aa2.12□□□□□ -2.07
COL9A1-206ENST00000470652 ETDCA0A1B0GVM5 59 aa2.11□□□□□ -2.07
COL9A1-206ENST00000470652 H3BUT2 72 aa2.11□□□□□ -2.07
COL9A1-206ENST00000470652 COX7BP24311 80 aa2.11□□□□□ -2.07
COL9A1-206ENST00000470652 Q6ZRX8 168 aa2.11□□□□□ -2.07
COL9A1-206ENST00000470652 DEFB105AQ8NG35 78 aa2.11□□□□□ -2.07
COL9A1-206ENST00000470652 DIRC1Q969H9 104 aa2.11□□□□□ -2.07
COL9A1-206ENST00000470652 TRAV13-2A0A0B4J235 113 aa2.1□□□□□ -2.07
COL9A1-206ENST00000470652 TCL1BO95988 128 aa2.1□□□□□ -2.07
COL9A1-206ENST00000470652 MT1HL1P0DM35 61 aa2.1□□□□□ -2.07
COL9A1-206ENST00000470652 INAFM2P0DMQ5 153 aa2.1□□□□□ -2.07
COL9A1-206ENST00000470652 PSMB2P49721 201 aa2.1□□□□□ -2.07
COL9A1-206ENST00000470652 ELOF1P60002 83 aaKnown RBP2.1□□□□□ -2.07
COL9A1-206ENST00000470652 KRTAP13-2Q52LG2 175 aa2.1□□□□□ -2.07
COL9A1-206ENST00000470652 PKIGQ9Y2B9 76 aa2.1□□□□□ -2.07
COL9A1-206ENST00000470652 M0R143 59 aa2.09□□□□□ -2.07
COL9A1-206ENST00000470652 RPL28P46779 137 aaKnown RBP2.09□□□□□ -2.07
COL9A1-206ENST00000470652 LINC00575Q6W349 94 aa2.09□□□□□ -2.07
COL9A1-206ENST00000470652 SPRR4Q96PI1 79 aa2.09□□□□□ -2.07
COL9A1-206ENST00000470652 A0A1B0GV90 55 aa2.08□□□□□ -2.08
COL9A1-206ENST00000470652 Q5W150 140 aa2.08□□□□□ -2.08
COL9A1-206ENST00000470652 SPINK6Q6UWN8 80 aa2.08□□□□□ -2.08
COL9A1-206ENST00000470652 HRCT1Q6UXD1 115 aa2.08□□□□□ -2.08
COL9A1-206ENST00000470652 Q6ZQY7 126 aa2.08□□□□□ -2.08
COL9A1-206ENST00000470652 A0A1W2PPM0 123 aa2.07□□□□□ -2.08
COL9A1-206ENST00000470652 hADV29S1A0JD25 119 aa2.07□□□□□ -2.08
COL9A1-206ENST00000470652 SCGB1C2P0DMR2 95 aa2.07□□□□□ -2.08
COL9A1-206ENST00000470652 COPS9Q8WXC6 57 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms