RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 TRBV7-6A0A0J9YX20 115 aa3.69□□□□□ -1.82
PTCD3-208ENST00000469585 F8WEM9 126 aa3.69□□□□□ -1.82
PTCD3-208ENST00000469585 TAL2Q16559 108 aa3.69□□□□□ -1.82
PTCD3-208ENST00000469585 BVES-AS1Q5T3Y7 98 aa3.69□□□□□ -1.82
PTCD3-208ENST00000469585 C9orf153Q5TBE3 101 aa3.69□□□□□ -1.82
PTCD3-208ENST00000469585 KRTAP11-1Q8IUC1 163 aa3.69□□□□□ -1.82
PTCD3-208ENST00000469585 SMCR5Q8TEV8 140 aa3.69□□□□□ -1.82
PTCD3-208ENST00000469585 C14orf144Q96I85 54 aa3.69□□□□□ -1.82
PTCD3-208ENST00000469585 LAMTOR3Q9UHA4 124 aa3.69□□□□□ -1.82
PTCD3-208ENST00000469585 SPRR1AP35321 89 aa3.68□□□□□ -1.82
PTCD3-208ENST00000469585 C6orf99Q4VX62 202 aa3.68□□□□□ -1.82
PTCD3-208ENST00000469585 SPAG11AQ6PDA7 123 aa3.68□□□□□ -1.82
PTCD3-208ENST00000469585 SOSTDC1Q6X4U4 206 aa3.68□□□□□ -1.82
PTCD3-208ENST00000469585 HIGD1BQ9P298 99 aa3.68□□□□□ -1.82
PTCD3-208ENST00000469585 KIAA1109Q2LD37 5005 aa3.68□□□□□ -1.82
PTCD3-208ENST00000469585 COX6CP09669 75 aa3.67□□□□□ -1.82
PTCD3-208ENST00000469585 CTAG1AP78358 180 aa3.67□□□□□ -1.82
PTCD3-208ENST00000469585 LINC00304Q8N9R0 145 aa3.67□□□□□ -1.82
PTCD3-208ENST00000469585 Q8NDZ9 215 aa3.67□□□□□ -1.82
PTCD3-208ENST00000469585 SPRR4Q96PI1 79 aa3.67□□□□□ -1.82
PTCD3-208ENST00000469585 C12orf57Q99622 126 aa3.67□□□□□ -1.82
PTCD3-208ENST00000469585 ANAPC11Q9NYG5 84 aa3.67□□□□□ -1.82
PTCD3-208ENST00000469585 UQCR10Q9UDW1 63 aa3.67□□□□□ -1.82
PTCD3-208ENST00000469585 LRP1BQ9NZR2 4599 aa3.67□□□□□ -1.82
PTCD3-208ENST00000469585 H7C2G1 150 aa3.66□□□□□ -1.82
PTCD3-208ENST00000469585 ELOF1P60002 83 aaKnown RBP3.66□□□□□ -1.82
PTCD3-208ENST00000469585 KRTAP13-1Q8IUC0 172 aa3.66□□□□□ -1.82
PTCD3-208ENST00000469585 DEFB105AQ8NG35 78 aa3.66□□□□□ -1.82
PTCD3-208ENST00000469585 HSPG2P98160 4391 aa3.65□□□□□ -1.82
PTCD3-208ENST00000469585 TSPAN13O95857 204 aa3.65□□□□□ -1.83
PTCD3-208ENST00000469585 KRTAP10-8P60410 259 aa3.65□□□□□ -1.83
PTCD3-208ENST00000469585 DNAH5Q8TE73 4624 aa3.65□□□□□ -1.83
PTCD3-208ENST00000469585 A0A0B4J2C4 111 aa3.64□□□□□ -1.83
PTCD3-208ENST00000469585 TEX49A0A1B0GTD5 131 aa3.64□□□□□ -1.83
PTCD3-208ENST00000469585 hADV29S1A0JD25 119 aa3.64□□□□□ -1.83
PTCD3-208ENST00000469585 TSTD3H0UI37 97 aa3.64□□□□□ -1.83
PTCD3-208ENST00000469585 H0YGX0 51 aa3.64□□□□□ -1.83
PTCD3-208ENST00000469585 DNAL4O96015 105 aa3.64□□□□□ -1.83
PTCD3-208ENST00000469585 PSMB2P49721 201 aa3.64□□□□□ -1.83
PTCD3-208ENST00000469585 HSD52Q0P140 79 aa3.64□□□□□ -1.83
PTCD3-208ENST00000469585 MOBPQ13875 183 aa3.64□□□□□ -1.83
PTCD3-208ENST00000469585 SSBP3-AS1Q7Z2R9 100 aa3.64□□□□□ -1.83
PTCD3-208ENST00000469585 SMIM11BQ8TCY0 68 aa3.64□□□□□ -1.83
PTCD3-208ENST00000469585 DYNC1H1Q14204 4646 aaKnown RBP3.64□□□□□ -1.83
PTCD3-208ENST00000469585 KRTAP4-16G5E9R7 235 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-208ENST00000469585 H3BQ85 93 aa3.63□□□□□ -1.83
PTCD3-208ENST00000469585 M0R143 59 aa3.63□□□□□ -1.83
PTCD3-208ENST00000469585 SPINK1P00995 79 aa3.63□□□□□ -1.83
PTCD3-208ENST00000469585 SMIM6P0DI80 62 aa3.63□□□□□ -1.83
PTCD3-208ENST00000469585 MT1HL1P0DM35 61 aa3.63□□□□□ -1.83
PTCD3-208ENST00000469585 OCIAD2Q56VL3 154 aa3.63□□□□□ -1.83
PTCD3-208ENST00000469585 PYY3Q5JQD4 70 aa3.63□□□□□ -1.83
PTCD3-208ENST00000469585 Q9BRP9 147 aa3.63□□□□□ -1.83
PTCD3-208ENST00000469585 LIMD2Q9BT23 127 aa3.63□□□□□ -1.83
PTCD3-208ENST00000469585 SNHG12Q9BXW3 62 aa3.63□□□□□ -1.83
PTCD3-208ENST00000469585 PRO1854Q9UHT4 67 aa3.63□□□□□ -1.83
PTCD3-208ENST00000469585 LINC00483Q53H64 154 aa3.62□□□□□ -1.83
PTCD3-208ENST00000469585 RYR1P21817 5038 aa3.61□□□□□ -1.83
PTCD3-208ENST00000469585 HERC2O95714 4834 aa3.61□□□□□ -1.83
PTCD3-208ENST00000469585 SCGB1C2P0DMR2 95 aa3.61□□□□□ -1.83
PTCD3-208ENST00000469585 LYRM7Q5U5X0 104 aa3.61□□□□□ -1.83
PTCD3-208ENST00000469585 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-208ENST00000469585 PPDPFLQ8WWR9 84 aa3.61□□□□□ -1.83
PTCD3-208ENST00000469585 PRO1933Q9H354 126 aa3.61□□□□□ -1.83
PTCD3-208ENST00000469585 APOBP04114 4563 aaKnown RBP3.61□□□□□ -1.83
PTCD3-208ENST00000469585 A0A1B0GX51 115 aa3.6□□□□□ -1.83
PTCD3-208ENST00000469585 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
PTCD3-208ENST00000469585 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
PTCD3-208ENST00000469585 LINC00575Q6W349 94 aa3.6□□□□□ -1.83
PTCD3-208ENST00000469585 C3orf22Q8N5N4 141 aa3.6□□□□□ -1.83
PTCD3-208ENST00000469585 RPS29P62273 56 aaKnown RBP3.59□□□□□ -1.83
PTCD3-208ENST00000469585 Q6JHZ5 121 aa3.59□□□□□ -1.83
PTCD3-208ENST00000469585 Q6ZQY7 126 aa3.59□□□□□ -1.83
PTCD3-208ENST00000469585 ST20-AS1Q8NBB2 130 aa3.59□□□□□ -1.83
PTCD3-208ENST00000469585 TCL1BO95988 128 aa3.58□□□□□ -1.84
PTCD3-208ENST00000469585 FABP2P12104 132 aa3.58□□□□□ -1.84
PTCD3-208ENST00000469585 SPRR1BP22528 89 aa3.58□□□□□ -1.84
PTCD3-208ENST00000469585 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
PTCD3-208ENST00000469585 KRTAP13-2Q52LG2 175 aa3.58□□□□□ -1.84
PTCD3-208ENST00000469585 C2orf91Q6ZV80 131 aa3.58□□□□□ -1.84
PTCD3-208ENST00000469585 FP248Q71RG6 208 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-208ENST00000469585 MTURNQ8N3F0 131 aa3.58□□□□□ -1.84
PTCD3-208ENST00000469585 VPS13BQ7Z7G8 4022 aa3.58□□□□□ -1.84
PTCD3-208ENST00000469585 FXYD2P54710 66 aa3.57□□□□□ -1.84
PTCD3-208ENST00000469585 CD164Q04900 197 aa3.57□□□□□ -1.84
PTCD3-208ENST00000469585 HRCT1Q6UXD1 115 aa3.57□□□□□ -1.84
PTCD3-208ENST00000469585 ORMDL1Q9P0S3 153 aa3.57□□□□□ -1.84
PTCD3-208ENST00000469585 IGLV5-48A0A075B6I7 105 aa3.56□□□□□ -1.84
PTCD3-208ENST00000469585 LOC105371267A0A1B0GV96 52 aa3.56□□□□□ -1.84
PTCD3-208ENST00000469585 TMEM256-PLSCR3K7ERE1 68 aa3.56□□□□□ -1.84
PTCD3-208ENST00000469585 BATFQ16520 125 aa3.55□□□□□ -1.84
PTCD3-208ENST00000469585 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
PTCD3-208ENST00000469585 SS18L2Q9UHA2 77 aa3.55□□□□□ -1.84
PTCD3-208ENST00000469585 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
PTCD3-208ENST00000469585 RETNLBQ9BQ08 111 aa3.54□□□□□ -1.84
PTCD3-208ENST00000469585 A0A0U1RQV1 116 aa3.53□□□□□ -1.84
PTCD3-208ENST00000469585 H3BMG7 143 aa3.53□□□□□ -1.84
PTCD3-208ENST00000469585 K7ERJ3 54 aa3.53□□□□□ -1.84
PTCD3-208ENST00000469585 ATXN8Q156A1 80 aa3.53□□□□□ -1.84
PTCD3-208ENST00000469585 FAT1Q14517 4588 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms