RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 HRCT1Q6UXD1 115 aa6□□□□□ -1.45
COL4A3-204ENST00000469504 KRTAP4-11Q9BYQ6 195 aa6□□□□□ -1.45
COL4A3-204ENST00000469504 IGLV5-48A0A075B6I7 105 aa5.99□□□□□ -1.45
COL4A3-204ENST00000469504 KRTDAPP60985 99 aa5.99□□□□□ -1.45
COL4A3-204ENST00000469504 TTTY13Q9BZ97 58 aa5.99□□□□□ -1.45
COL4A3-204ENST00000469504 TRAV13-2A0A0B4J235 113 aa5.98□□□□□ -1.45
COL4A3-204ENST00000469504 A6NDN8 102 aa5.98□□□□□ -1.45
COL4A3-204ENST00000469504 Q1RN00 199 aa5.98□□□□□ -1.45
COL4A3-204ENST00000469504 DEFB105AQ8NG35 78 aa5.98□□□□□ -1.45
COL4A3-204ENST00000469504 SNRPEP62304 92 aaKnown RBP5.97□□□□□ -1.45
COL4A3-204ENST00000469504 SMIM29Q86T20 159 aa5.97□□□□□ -1.45
COL4A3-204ENST00000469504 IGLV8-61A0A075B6I0 122 aa5.95□□□□□ -1.46
COL4A3-204ENST00000469504 C9orf92A6NGG3 77 aa5.95□□□□□ -1.46
COL4A3-204ENST00000469504 PCOTHQ58A44 107 aa5.95□□□□□ -1.46
COL4A3-204ENST00000469504 MUSTN1Q8IVN3 82 aa5.95□□□□□ -1.46
COL4A3-204ENST00000469504 TCL1BO95988 128 aa5.94□□□□□ -1.46
COL4A3-204ENST00000469504 CFC1BP0CG36 223 aa5.94□□□□□ -1.46
COL4A3-204ENST00000469504 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
COL4A3-204ENST00000469504 VAMP3Q15836 100 aa5.93□□□□□ -1.46
COL4A3-204ENST00000469504 C1orf195Q5TG92 126 aa5.93□□□□□ -1.46
COL4A3-204ENST00000469504 F8WEM9 126 aa5.92□□□□□ -1.46
COL4A3-204ENST00000469504 SMIM11BQ8TCY0 68 aa5.92□□□□□ -1.46
COL4A3-204ENST00000469504 KRTAP19-2Q3LHN2 52 aa5.91□□□□□ -1.46
COL4A3-204ENST00000469504 PCP2Q8IVA1 136 aa5.91□□□□□ -1.46
COL4A3-204ENST00000469504 RPL37P61927 97 aaKnown RBP5.9□□□□□ -1.46
COL4A3-204ENST00000469504 Q6JHZ5 121 aa5.9□□□□□ -1.46
COL4A3-204ENST00000469504 ATOH7Q8N100 152 aa5.9□□□□□ -1.46
COL4A3-204ENST00000469504 MT1HP80294 61 aa5.89□□□□□ -1.47
COL4A3-204ENST00000469504 HSBP1L1C9JCN9 74 aa5.88□□□□□ -1.47
COL4A3-204ENST00000469504 LINC00575Q6W349 94 aa5.88□□□□□ -1.47
COL4A3-204ENST00000469504 hADV29S1A0JD25 119 aa5.87□□□□□ -1.47
COL4A3-204ENST00000469504 PPDPFLQ8WWR9 84 aa5.87□□□□□ -1.47
COL4A3-204ENST00000469504 CLEC2BQ92478 149 aa5.86□□□□□ -1.47
COL4A3-204ENST00000469504 SCGB1D1O95968 90 aa5.85□□□□□ -1.47
COL4A3-204ENST00000469504 S100A2P29034 98 aa5.85□□□□□ -1.47
COL4A3-204ENST00000469504 BVES-AS1Q5T3Y7 98 aa5.85□□□□□ -1.47
COL4A3-204ENST00000469504 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.85□□□□□ -1.47
COL4A3-204ENST00000469504 Q6ZQY7 126 aa5.85□□□□□ -1.47
COL4A3-204ENST00000469504 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
COL4A3-204ENST00000469504 A0A0G2JQZ4 141 aa5.84□□□□□ -1.47
COL4A3-204ENST00000469504 TRBV7-7A0A0K0K1E9 115 aa5.84□□□□□ -1.47
COL4A3-204ENST00000469504 OCIAD2Q56VL3 154 aa5.83□□□□□ -1.48
COL4A3-204ENST00000469504 CRCT1Q9UGL9 99 aa5.83□□□□□ -1.48
COL4A3-204ENST00000469504 COX6B2Q6YFQ2 88 aa5.82□□□□□ -1.48
COL4A3-204ENST00000469504 HIST3H2BBQ8N257 126 aa5.82□□□□□ -1.48
COL4A3-204ENST00000469504 HIST1H2BLQ99880 126 aa5.82□□□□□ -1.48
COL4A3-204ENST00000469504 SNCGO76070 127 aa5.81□□□□□ -1.48
COL4A3-204ENST00000469504 IGFL1Q6UW32 110 aa5.81□□□□□ -1.48
COL4A3-204ENST00000469504 M0R2T5 61 aa5.8□□□□□ -1.48
COL4A3-204ENST00000469504 KRTAP10-6P60371 365 aaPredicted RBP5.8□□□□□ -1.48
COL4A3-204ENST00000469504 Q75L30 129 aa5.8□□□□□ -1.48
COL4A3-204ENST00000469504 SNHG12Q9BXW3 62 aa5.8□□□□□ -1.48
COL4A3-204ENST00000469504 FSIP2Q5CZC0 6907 aa5.79□□□□□ -1.48
COL4A3-204ENST00000469504 S100A6P06703 90 aa5.79□□□□□ -1.48
COL4A3-204ENST00000469504 ATP11AUNQ6ZP68 121 aa5.79□□□□□ -1.48
COL4A3-204ENST00000469504 HIST1H4GQ99525 98 aa5.79□□□□□ -1.48
COL4A3-204ENST00000469504 SS18L2Q9UHA2 77 aa5.79□□□□□ -1.48
COL4A3-204ENST00000469504 LST1O00453 97 aa5.78□□□□□ -1.48
COL4A3-204ENST00000469504 Q6Q795 121 aa5.78□□□□□ -1.48
COL4A3-204ENST00000469504 DLEU1O43261 78 aa5.77□□□□□ -1.49
COL4A3-204ENST00000469504 C12orf57Q99622 126 aa5.77□□□□□ -1.49
COL4A3-204ENST00000469504 COX8AP10176 69 aa5.76□□□□□ -1.49
COL4A3-204ENST00000469504 H0YGX0 51 aa5.75□□□□□ -1.49
COL4A3-204ENST00000469504 OBSCN-AS1Q96MR7 158 aa5.75□□□□□ -1.49
COL4A3-204ENST00000469504 FLGP20930 4061 aaPredicted RBP5.74□□□□□ -1.49
COL4A3-204ENST00000469504 A0A1B0GX51 115 aa5.73□□□□□ -1.49
COL4A3-204ENST00000469504 TEN1Q86WV5 123 aa5.73□□□□□ -1.49
COL4A3-204ENST00000469504 RAB37Q96AX2 223 aa5.73□□□□□ -1.49
COL4A3-204ENST00000469504 A0A0B4J2C4 111 aa5.72□□□□□ -1.49
COL4A3-204ENST00000469504 H3BUT2 72 aa5.72□□□□□ -1.49
COL4A3-204ENST00000469504 HIGD1BQ9P298 99 aa5.72□□□□□ -1.49
COL4A3-204ENST00000469504 CFC1P0CG37 223 aa5.71□□□□□ -1.5
COL4A3-204ENST00000469504 Q96NJ1 140 aa5.71□□□□□ -1.5
COL4A3-204ENST00000469504 C20orf166-AS1Q96NR2 134 aa5.71□□□□□ -1.5
COL4A3-204ENST00000469504 NDUFV3P56181 108 aaKnown RBP5.7□□□□□ -1.5
COL4A3-204ENST00000469504 A8MUU9 505 aa5.68□□□□□ -1.5
COL4A3-204ENST00000469504 TRBV20-1A0A075B6N2 111 aa5.67□□□□□ -1.5
COL4A3-204ENST00000469504 A0A087WSZ3 146 aa5.67□□□□□ -1.5
COL4A3-204ENST00000469504 H3BMG7 143 aa5.67□□□□□ -1.5
COL4A3-204ENST00000469504 H3BQ85 93 aa5.67□□□□□ -1.5
COL4A3-204ENST00000469504 LOC105371267A0A1B0GV96 52 aa5.66□□□□□ -1.5
COL4A3-204ENST00000469504 FAM218AQ96MZ4 157 aa5.66□□□□□ -1.5
COL4A3-204ENST00000469504 SPATA45Q537H7 98 aa5.65□□□□□ -1.5
COL4A3-204ENST00000469504 CEND1Q8N111 149 aa5.65□□□□□ -1.5
COL4A3-204ENST00000469504 C14orf144Q96I85 54 aa5.65□□□□□ -1.5
COL4A3-204ENST00000469504 PRO1854Q9UHT4 67 aa5.65□□□□□ -1.5
COL4A3-204ENST00000469504 FABP2P12104 132 aa5.64□□□□□ -1.51
COL4A3-204ENST00000469504 VAMP8Q9BV40 100 aa5.64□□□□□ -1.51
COL4A3-204ENST00000469504 PAM16Q9Y3D7 125 aa5.64□□□□□ -1.51
COL4A3-204ENST00000469504 TRBV7-4A0A0J9YYF1 115 aa5.62□□□□□ -1.51
COL4A3-204ENST00000469504 DNAL4O96015 105 aa5.62□□□□□ -1.51
COL4A3-204ENST00000469504 C2orf91Q6ZV80 131 aa5.62□□□□□ -1.51
COL4A3-204ENST00000469504 SIGMAR1Q99720 223 aa5.61□□□□□ -1.51
COL4A3-204ENST00000469504 A0A1W2PNM2 257 aa5.6□□□□□ -1.51
COL4A3-204ENST00000469504 TMEM256-PLSCR3K7ERE1 68 aa5.6□□□□□ -1.51
COL4A3-204ENST00000469504 LINC00313P59037 77 aa5.6□□□□□ -1.51
COL4A3-204ENST00000469504 ANKRD29Q8N6D5 301 aa5.6□□□□□ -1.51
COL4A3-204ENST00000469504 ORMDL1Q9P0S3 153 aa5.6□□□□□ -1.51
COL4A3-204ENST00000469504 TRIAP1O43715 76 aa5.59□□□□□ -1.51
COL4A3-204ENST00000469504 COX6CP09669 75 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms