RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 PANO1I0J062 215 aa11.24□□□□□ -0.61
MCF2L-221ENST00000469415 FAM30AQ9NZY2 134 aa11.24□□□□□ -0.61
MCF2L-221ENST00000469415 H7BZZ5 65 aa11.23□□□□□ -0.61
MCF2L-221ENST00000469415 Q8NBF4 154 aa11.22□□□□□ -0.61
MCF2L-221ENST00000469415 SEC61GP60059 68 aa11.21□□□□□ -0.61
MCF2L-221ENST00000469415 SMIM29Q86T20 159 aa11.21□□□□□ -0.61
MCF2L-221ENST00000469415 A0A087WSZ3 146 aa11.2□□□□□ -0.62
MCF2L-221ENST00000469415 FAM229BQ4G0N7 80 aa11.19□□□□□ -0.62
MCF2L-221ENST00000469415 UBE2AP49459 152 aa11.19□□□□□ -0.62
MCF2L-221ENST00000469415 TNP2Q05952 138 aa11.19□□□□□ -0.62
MCF2L-221ENST00000469415 EPM2AB3EWF7 344 aa11.19□□□□□ -0.62
MCF2L-221ENST00000469415 K7EQZ3 153 aa11.18□□□□□ -0.62
MCF2L-221ENST00000469415 IGFL1Q6UW32 110 aa11.18□□□□□ -0.62
MCF2L-221ENST00000469415 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
MCF2L-221ENST00000469415 NBDYA0A0U1RRE5 68 aa11.16□□□□□ -0.62
MCF2L-221ENST00000469415 C1orf195Q5TG92 126 aa11.16□□□□□ -0.62
MCF2L-221ENST00000469415 CNBPP62633 177 aaKnown RBP11.15□□□□□ -0.62
MCF2L-221ENST00000469415 B9D2Q9BPU9 175 aa11.15□□□□□ -0.62
MCF2L-221ENST00000469415 WFDC13Q8IUB5 93 aa11.14□□□□□ -0.63
MCF2L-221ENST00000469415 TMEM254Q8TBM7 123 aa11.14□□□□□ -0.63
MCF2L-221ENST00000469415 V9GYY9 64 aa11.14□□□□□ -0.63
MCF2L-221ENST00000469415 MEGF8Q7Z7M0 2845 aa11.13□□□□□ -0.63
MCF2L-221ENST00000469415 SERP1Q9Y6X1 66 aa11.13□□□□□ -0.63
MCF2L-221ENST00000469415 DSCR10P59022 87 aa11.12□□□□□ -0.63
MCF2L-221ENST00000469415 PRKDCP78527 4128 aaKnown RBP11.1□□□□□ -0.63
MCF2L-221ENST00000469415 C9orf163Q8N9P6 203 aa11.1□□□□□ -0.63
MCF2L-221ENST00000469415 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-221ENST00000469415 STARD9Q9P2P6 4700 aa11.1□□□□□ -0.63
MCF2L-221ENST00000469415 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
MCF2L-221ENST00000469415 KLKP1Q107X0 134 aa11.08□□□□□ -0.64
MCF2L-221ENST00000469415 IGLV9-49A0A0B4J1Y8 123 aa11.08□□□□□ -0.64
MCF2L-221ENST00000469415 OCR1Q9BZK8 76 aa11.08□□□□□ -0.64
MCF2L-221ENST00000469415 SPRR4Q96PI1 79 aa11.07□□□□□ -0.64
MCF2L-221ENST00000469415 ANAPC11Q9NYG5 84 aa11.06□□□□□ -0.64
MCF2L-221ENST00000469415 SMIM26A0A096LP01 95 aa11.05□□□□□ -0.64
MCF2L-221ENST00000469415 PRR4Q16378 134 aa11.05□□□□□ -0.64
MCF2L-221ENST00000469415 DNHD1Q96M86 4753 aa11.04□□□□□ -0.64
MCF2L-221ENST00000469415 NUPR2A6NF83 97 aa11.03□□□□□ -0.64
MCF2L-221ENST00000469415 BCE1O60756 84 aa11.03□□□□□ -0.64
MCF2L-221ENST00000469415 KMT2AQ03164 3969 aa11.02□□□□□ -0.65
MCF2L-221ENST00000469415 Q6ZRN7 208 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-221ENST00000469415 HCG22E2RYF7 251 aa10.97□□□□□ -0.65
MCF2L-221ENST00000469415 A8MU10 97 aa10.97□□□□□ -0.65
MCF2L-221ENST00000469415 H0Y9J4 135 aa10.96□□□□□ -0.65
MCF2L-221ENST00000469415 PSPHP1O15172 72 aa10.96□□□□□ -0.65
MCF2L-221ENST00000469415 A0A087WTM6 91 aa10.96□□□□□ -0.66
MCF2L-221ENST00000469415 FBN3Q75N90 2809 aa10.94□□□□□ -0.66
MCF2L-221ENST00000469415 LY6G6CO95867 125 aa10.94□□□□□ -0.66
MCF2L-221ENST00000469415 RTL8CO15255 209 aa10.93□□□□□ -0.66
MCF2L-221ENST00000469415 A0A1B0GW54 56 aa10.9□□□□□ -0.66
MCF2L-221ENST00000469415 FRAS1Q86XX4 4008 aa10.89□□□□□ -0.67
MCF2L-221ENST00000469415 SPACA4Q8TDM5 124 aa10.89□□□□□ -0.67
MCF2L-221ENST00000469415 PSORS1C2Q9UIG4 136 aa10.89□□□□□ -0.67
MCF2L-221ENST00000469415 NDUFC1O43677 76 aa10.87□□□□□ -0.67
MCF2L-221ENST00000469415 IGLV8-61A0A075B6I0 122 aa10.86□□□□□ -0.67
MCF2L-221ENST00000469415 LINC00208Q96KT6 92 aa10.86□□□□□ -0.67
MCF2L-221ENST00000469415 MOBPQ13875 183 aa10.85□□□□□ -0.67
MCF2L-221ENST00000469415 CASC2Q6XLA1 102 aa10.85□□□□□ -0.67
MCF2L-221ENST00000469415 IGLV5-52A0A0A0MRZ9 124 aa10.85□□□□□ -0.67
MCF2L-221ENST00000469415 DNAH2Q9P225 4427 aa10.83□□□□□ -0.68
MCF2L-221ENST00000469415 VPS13DQ5THJ4 4388 aa10.82□□□□□ -0.68
MCF2L-221ENST00000469415 DYNC2H1Q8NCM8 4307 aaKnown RBP10.82□□□□□ -0.68
MCF2L-221ENST00000469415 PMAIP1Q13794 54 aa10.81□□□□□ -0.68
MCF2L-221ENST00000469415 SPINK6Q6UWN8 80 aa10.81□□□□□ -0.68
MCF2L-221ENST00000469415 KRTAP13-1Q8IUC0 172 aa10.81□□□□□ -0.68
MCF2L-221ENST00000469415 SPRR1BP22528 89 aa10.8□□□□□ -0.68
MCF2L-221ENST00000469415 PRR15Q8IV56 129 aa10.8□□□□□ -0.68
MCF2L-221ENST00000469415 C1orf134Q5TEV5 83 aa10.8□□□□□ -0.68
MCF2L-221ENST00000469415 LINC00472Q9H8W2 130 aa10.8□□□□□ -0.68
MCF2L-221ENST00000469415 A8MWP4 228 aa10.77□□□□□ -0.69
MCF2L-221ENST00000469415 IGHV6-1A0A0B4J1U7 121 aa10.76□□□□□ -0.69
MCF2L-221ENST00000469415 HECTD4Q9Y4D8 3996 aa10.76□□□□□ -0.69
MCF2L-221ENST00000469415 NDUFS5O43920 106 aa10.76□□□□□ -0.69
MCF2L-221ENST00000469415 MP68P56378 58 aa10.76□□□□□ -0.69
MCF2L-221ENST00000469415 H0Y9P7 68 aa10.74□□□□□ -0.69
MCF2L-221ENST00000469415 Q6ZR54 194 aa10.74□□□□□ -0.69
MCF2L-221ENST00000469415 NDUFB1O75438 58 aa10.73□□□□□ -0.69
MCF2L-221ENST00000469415 CIRBP-AS1Q8TBR5 109 aa10.73□□□□□ -0.69
MCF2L-221ENST00000469415 KRTAP29-1A8MX34 341 aaPredicted RBP10.72□□□□□ -0.69
MCF2L-221ENST00000469415 DNAH8Q96JB1 4490 aa10.72□□□□□ -0.69
MCF2L-221ENST00000469415 DNAH6Q9C0G6 4158 aa10.71□□□□□ -0.69
MCF2L-221ENST00000469415 KRTAP10-2P60368 255 aa10.71□□□□□ -0.69
MCF2L-221ENST00000469415 C1orf64Q8NEQ6 169 aa10.71□□□□□ -0.69
MCF2L-221ENST00000469415 DNAH17Q9UFH2 4485 aa10.71□□□□□ -0.7
MCF2L-221ENST00000469415 ZNF861PO60384 105 aa10.7□□□□□ -0.7
MCF2L-221ENST00000469415 WWC2-AS2Q96NR7 200 aa10.7□□□□□ -0.7
MCF2L-221ENST00000469415 SPTSSBQ8NFR3 76 aa10.69□□□□□ -0.7
MCF2L-221ENST00000469415 hDV103S1A0JD37 113 aa10.69□□□□□ -0.7
MCF2L-221ENST00000469415 PCOTHQ58A44 107 aa10.69□□□□□ -0.7
MCF2L-221ENST00000469415 ZCCHC13Q8WW36 166 aaKnown RBP10.69□□□□□ -0.7
MCF2L-221ENST00000469415 A8MUN3 132 aa10.68□□□□□ -0.7
MCF2L-221ENST00000469415 ATP5EP56381 51 aaPredicted RBP10.68□□□□□ -0.7
MCF2L-221ENST00000469415 DNAH11Q96DT5 4516 aa10.68□□□□□ -0.7
MCF2L-221ENST00000469415 A0A087X002 238 aa10.68□□□□□ -0.7
MCF2L-221ENST00000469415 NOTCH2NLQ7Z3S9 236 aa10.68□□□□□ -0.7
MCF2L-221ENST00000469415 MMP24-AS1A0A0U1RRL7 71 aa10.67□□□□□ -0.7
MCF2L-221ENST00000469415 LCE6AA0A183 80 aa10.67□□□□□ -0.7
MCF2L-221ENST00000469415 CDK2AP2O75956 126 aa10.66□□□□□ -0.7
MCF2L-221ENST00000469415 PLAC8Q9NZF1 115 aa10.66□□□□□ -0.7
MCF2L-221ENST00000469415 Q96NJ1 140 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms