RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 DYNC2H1Q8NCM8 4307 aaKnown RBP8.98□□□□□ -0.97
SMARCD3-205ENST00000469154 WWC2-AS2Q96NR7 200 aa8.98□□□□□ -0.97
SMARCD3-205ENST00000469154 HIGD2AQ9BW72 106 aa8.98□□□□□ -0.97
SMARCD3-205ENST00000469154 V9GYY9 64 aa8.98□□□□□ -0.97
SMARCD3-205ENST00000469154 STARD9Q9P2P6 4700 aa8.98□□□□□ -0.97
SMARCD3-205ENST00000469154 C16orf90A8MZG2 172 aa8.96□□□□□ -0.97
SMARCD3-205ENST00000469154 FP248Q71RG6 208 aaPredicted RBP8.96□□□□□ -0.98
SMARCD3-205ENST00000469154 A0A096LNI7 61 aa8.95□□□□□ -0.98
SMARCD3-205ENST00000469154 K7EQZ3 153 aa8.95□□□□□ -0.98
SMARCD3-205ENST00000469154 CNBPP62633 177 aaKnown RBP8.95□□□□□ -0.98
SMARCD3-205ENST00000469154 UBE2DNLQ8IWF7 75 aa8.95□□□□□ -0.98
SMARCD3-205ENST00000469154 PLECQ15149 4684 aaKnown RBP8.95□□□□□ -0.98
SMARCD3-205ENST00000469154 IGFL1Q6UW32 110 aa8.94□□□□□ -0.98
SMARCD3-205ENST00000469154 IGLV8-61A0A075B6I0 122 aa8.94□□□□□ -0.98
SMARCD3-205ENST00000469154 PRO0628Q9UI54 55 aa8.94□□□□□ -0.98
SMARCD3-205ENST00000469154 IGKV2-24A0A0C4DH68 120 aa8.93□□□□□ -0.98
SMARCD3-205ENST00000469154 HCG22E2RYF7 251 aa8.92□□□□□ -0.98
SMARCD3-205ENST00000469154 PRLHP81277 87 aa8.92□□□□□ -0.98
SMARCD3-205ENST00000469154 PSCAO43653 123 aa8.92□□□□□ -0.98
SMARCD3-205ENST00000469154 A0A1W2PNN7 141 aa8.91□□□□□ -0.98
SMARCD3-205ENST00000469154 KRTAP1-5Q9BYS1 174 aa8.9□□□□□ -0.98
SMARCD3-205ENST00000469154 C14orf177Q52M58 125 aa8.9□□□□□ -0.99
SMARCD3-205ENST00000469154 LINC00474Q9P2X8 69 aa8.9□□□□□ -0.99
SMARCD3-205ENST00000469154 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
SMARCD3-205ENST00000469154 UBE2AP49459 152 aa8.88□□□□□ -0.99
SMARCD3-205ENST00000469154 A0A0G2JQZ4 141 aa8.88□□□□□ -0.99
SMARCD3-205ENST00000469154 A0A087WSZ3 146 aa8.86□□□□□ -0.99
SMARCD3-205ENST00000469154 FAM229BQ4G0N7 80 aa8.86□□□□□ -0.99
SMARCD3-205ENST00000469154 H0Y9J4 135 aa8.85□□□□□ -0.99
SMARCD3-205ENST00000469154 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.85□□□□□ -0.99
SMARCD3-205ENST00000469154 SPRR1BP22528 89 aa8.85□□□□□ -0.99
SMARCD3-205ENST00000469154 PKIGQ9Y2B9 76 aa8.84□□□□□ -0.99
SMARCD3-205ENST00000469154 LINC00336Q6ZUF6 198 aa8.83□□□□□ -1
SMARCD3-205ENST00000469154 PHF5AQ7RTV0 110 aaKnown RBP8.83□□□□□ -1
SMARCD3-205ENST00000469154 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
SMARCD3-205ENST00000469154 LY6G6CO95867 125 aa8.82□□□□□ -1
SMARCD3-205ENST00000469154 NBDYA0A0U1RRE5 68 aa8.81□□□□□ -1
SMARCD3-205ENST00000469154 hDV103S1A0JD37 113 aa8.81□□□□□ -1
SMARCD3-205ENST00000469154 WFDC13Q8IUB5 93 aa8.81□□□□□ -1
SMARCD3-205ENST00000469154 VPS13DQ5THJ4 4388 aa8.81□□□□□ -1
SMARCD3-205ENST00000469154 CHTF8P0CG12 524 aa8.81□□□□□ -1
SMARCD3-205ENST00000469154 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
SMARCD3-205ENST00000469154 NDUFB1O75438 58 aa8.79□□□□□ -1
SMARCD3-205ENST00000469154 MP68P56378 58 aa8.79□□□□□ -1
SMARCD3-205ENST00000469154 MPLKIPQ8TAP9 179 aa8.79□□□□□ -1
SMARCD3-205ENST00000469154 KMT2AQ03164 3969 aa8.79□□□□□ -1
SMARCD3-205ENST00000469154 KRTAP29-1A8MX34 341 aaPredicted RBP8.78□□□□□ -1
SMARCD3-205ENST00000469154 C9orf163Q8N9P6 203 aa8.78□□□□□ -1
SMARCD3-205ENST00000469154 CYP4F30PQ9H0H9 118 aa8.78□□□□□ -1
SMARCD3-205ENST00000469154 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
SMARCD3-205ENST00000469154 DNAH10Q8IVF4 4471 aa8.76□□□□□ -1.01
SMARCD3-205ENST00000469154 PRR15Q8IV56 129 aa8.76□□□□□ -1.01
SMARCD3-205ENST00000469154 C1orf64Q8NEQ6 169 aa8.76□□□□□ -1.01
SMARCD3-205ENST00000469154 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
SMARCD3-205ENST00000469154 A8MWP4 228 aa8.75□□□□□ -1.01
SMARCD3-205ENST00000469154 CASC2Q6XLA1 102 aa8.75□□□□□ -1.01
SMARCD3-205ENST00000469154 LINC00472Q9H8W2 130 aa8.75□□□□□ -1.01
SMARCD3-205ENST00000469154 LRCOL1A6NCL2 159 aa8.74□□□□□ -1.01
SMARCD3-205ENST00000469154 C1orf195Q5TG92 126 aa8.74□□□□□ -1.01
SMARCD3-205ENST00000469154 TRAV22A0A0B4J277 110 aa8.73□□□□□ -1.01
SMARCD3-205ENST00000469154 H3BPC8 53 aa8.73□□□□□ -1.01
SMARCD3-205ENST00000469154 Q6ZR54 194 aa8.72□□□□□ -1.01
SMARCD3-205ENST00000469154 KRTAP13-1Q8IUC0 172 aa8.71□□□□□ -1.01
SMARCD3-205ENST00000469154 H0Y9P7 68 aa8.71□□□□□ -1.02
SMARCD3-205ENST00000469154 LINC00208Q96KT6 92 aa8.71□□□□□ -1.02
SMARCD3-205ENST00000469154 ALMS1Q8TCU4 4167 aa8.7□□□□□ -1.02
SMARCD3-205ENST00000469154 Q1T7F1 81 aa8.7□□□□□ -1.02
SMARCD3-205ENST00000469154 BRK1Q8WUW1 75 aa8.7□□□□□ -1.02
SMARCD3-205ENST00000469154 Q6ZRN7 208 aaPredicted RBP8.69□□□□□ -1.02
SMARCD3-205ENST00000469154 PRR4Q16378 134 aa8.68□□□□□ -1.02
SMARCD3-205ENST00000469154 SPANXA2-OT1Q8N9U9 137 aa8.67□□□□□ -1.02
SMARCD3-205ENST00000469154 C1orf134Q5TEV5 83 aa8.66□□□□□ -1.02
SMARCD3-205ENST00000469154 PANO1I0J062 215 aa8.66□□□□□ -1.02
SMARCD3-205ENST00000469154 MMP24-AS1A0A0U1RRL7 71 aa8.65□□□□□ -1.02
SMARCD3-205ENST00000469154 SPACA4Q8TDM5 124 aa8.64□□□□□ -1.03
SMARCD3-205ENST00000469154 HYDINQ4G0P3 5121 aa8.64□□□□□ -1.03
SMARCD3-205ENST00000469154 DNAH2Q9P225 4427 aa8.63□□□□□ -1.03
SMARCD3-205ENST00000469154 DNAH6Q9C0G6 4158 aa8.63□□□□□ -1.03
SMARCD3-205ENST00000469154 LINC00483Q53H64 154 aa8.61□□□□□ -1.03
SMARCD3-205ENST00000469154 IGLV9-49A0A0B4J1Y8 123 aa8.61□□□□□ -1.03
SMARCD3-205ENST00000469154 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
SMARCD3-205ENST00000469154 ZNF706Q9Y5V0 76 aaPredicted RBP8.6□□□□□ -1.03
SMARCD3-205ENST00000469154 Q96NJ1 140 aa8.6□□□□□ -1.03
SMARCD3-205ENST00000469154 SACSQ9NZJ4 4579 aa8.6□□□□□ -1.03
SMARCD3-205ENST00000469154 A0A087WTM6 91 aa8.59□□□□□ -1.03
SMARCD3-205ENST00000469154 MOBPQ13875 183 aa8.59□□□□□ -1.03
SMARCD3-205ENST00000469154 RTL8CO15255 209 aa8.58□□□□□ -1.04
SMARCD3-205ENST00000469154 ASB16-AS1Q495Z4 193 aa8.57□□□□□ -1.04
SMARCD3-205ENST00000469154 TP53AIP1Q9HCN2 124 aa8.57□□□□□ -1.04
SMARCD3-205ENST00000469154 CD164Q04900 197 aa8.55□□□□□ -1.04
SMARCD3-205ENST00000469154 SRRM2Q9UQ35 2752 aaKnown RBP8.55□□□□□ -1.04
SMARCD3-205ENST00000469154 C8orf17Q9NRJ1 99 aa8.55□□□□□ -1.04
SMARCD3-205ENST00000469154 KMT2CQ8NEZ4 4911 aaKnown RBP8.55□□□□□ -1.04
SMARCD3-205ENST00000469154 FRAS1Q86XX4 4008 aa8.54□□□□□ -1.04
SMARCD3-205ENST00000469154 PSPHP1O15172 72 aa8.54□□□□□ -1.04
SMARCD3-205ENST00000469154 DNAH17Q9UFH2 4485 aa8.52□□□□□ -1.04
SMARCD3-205ENST00000469154 IGLV5-52A0A0A0MRZ9 124 aa8.52□□□□□ -1.05
SMARCD3-205ENST00000469154 A0A1B0GVX0 72 aa8.52□□□□□ -1.05
SMARCD3-205ENST00000469154 PSORS1C2Q9UIG4 136 aa8.51□□□□□ -1.05
SMARCD3-205ENST00000469154 IGLV7-46A0A075B6I9 117 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms