RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 KRTAP6-3Q3LI67 103 aa9.26□□□□□ -0.93
LINC00888-201ENST00000468380 Q6JHZ5 121 aa9.26□□□□□ -0.93
LINC00888-201ENST00000468380 CLEC2BQ92478 149 aa9.26□□□□□ -0.93
LINC00888-201ENST00000468380 LINC00846Q9NV44 126 aa9.25□□□□□ -0.93
LINC00888-201ENST00000468380 NHP2Q9NX24 153 aaKnown RBP9.25□□□□□ -0.93
LINC00888-201ENST00000468380 SMIM11BQ8TCY0 68 aa9.24□□□□□ -0.93
LINC00888-201ENST00000468380 FAM236DA0A1B0GTK5 79 aa9.22□□□□□ -0.93
LINC00888-201ENST00000468380 SYS1-DBNDD2H3BUS1 97 aa9.22□□□□□ -0.93
LINC00888-201ENST00000468380 LST1O00453 97 aa9.22□□□□□ -0.93
LINC00888-201ENST00000468380 FAM236CP0DP71 79 aa9.22□□□□□ -0.93
LINC00888-201ENST00000468380 OCIAD2Q56VL3 154 aa9.22□□□□□ -0.93
LINC00888-201ENST00000468380 A6NJY4 79 aa9.21□□□□□ -0.94
LINC00888-201ENST00000468380 NDUFA5Q16718 116 aa9.2□□□□□ -0.94
LINC00888-201ENST00000468380 MPLKIPQ8TAP9 179 aa9.2□□□□□ -0.94
LINC00888-201ENST00000468380 SLC7A5P1Q8MH63 180 aa9.19□□□□□ -0.94
LINC00888-201ENST00000468380 LINC01545Q5VT33 79 aa9.18□□□□□ -0.94
LINC00888-201ENST00000468380 LINC00575Q6W349 94 aa9.18□□□□□ -0.94
LINC00888-201ENST00000468380 Q6ZQY7 126 aa9.18□□□□□ -0.94
LINC00888-201ENST00000468380 MUSTN1Q8IVN3 82 aa9.18□□□□□ -0.94
LINC00888-201ENST00000468380 TRAV13-2A0A0B4J235 113 aa9.17□□□□□ -0.94
LINC00888-201ENST00000468380 IFITM1P13164 125 aa9.17□□□□□ -0.94
LINC00888-201ENST00000468380 HRES1P13985 223 aa9.17□□□□□ -0.94
LINC00888-201ENST00000468380 SCGB1D4Q6XE38 83 aa9.15□□□□□ -0.94
LINC00888-201ENST00000468380 hADV29S1A0JD25 119 aa9.13□□□□□ -0.95
LINC00888-201ENST00000468380 COPS9Q8WXC6 57 aa9.13□□□□□ -0.95
LINC00888-201ENST00000468380 H3BUT2 72 aa9.12□□□□□ -0.95
LINC00888-201ENST00000468380 DSCR10P59022 87 aa9.12□□□□□ -0.95
LINC00888-201ENST00000468380 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
LINC00888-201ENST00000468380 VAMP3Q15836 100 aa9.1□□□□□ -0.95
LINC00888-201ENST00000468380 PET117Q6UWS5 81 aa9.1□□□□□ -0.95
LINC00888-201ENST00000468380 Q6ZVH6 145 aa9.1□□□□□ -0.95
LINC00888-201ENST00000468380 NOTCH2NLQ7Z3S9 236 aa9.09□□□□□ -0.95
LINC00888-201ENST00000468380 ANKRD39Q53RE8 183 aa9.06□□□□□ -0.96
LINC00888-201ENST00000468380 SS18L2Q9UHA2 77 aa9.05□□□□□ -0.96
LINC00888-201ENST00000468380 NEBP20929 6669 aa9.04□□□□□ -0.96
LINC00888-201ENST00000468380 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.04□□□□□ -0.96
LINC00888-201ENST00000468380 SNHG12Q9BXW3 62 aa9.04□□□□□ -0.96
LINC00888-201ENST00000468380 COLCA2A8K830 154 aa9.03□□□□□ -0.96
LINC00888-201ENST00000468380 C3orf79P0CE67 100 aa9.03□□□□□ -0.96
LINC00888-201ENST00000468380 A0A087WSZ3 146 aa9□□□□□ -0.97
LINC00888-201ENST00000468380 PPDPFLQ8WWR9 84 aa9□□□□□ -0.97
LINC00888-201ENST00000468380 TEN1Q86WV5 123 aa8.99□□□□□ -0.97
LINC00888-201ENST00000468380 SCGB1D1O95968 90 aa8.98□□□□□ -0.97
LINC00888-201ENST00000468380 LINC00313P59037 77 aa8.98□□□□□ -0.97
LINC00888-201ENST00000468380 HIST1H2BKO60814 126 aa8.96□□□□□ -0.98
LINC00888-201ENST00000468380 HIST1H2BJP06899 126 aa8.96□□□□□ -0.98
LINC00888-201ENST00000468380 HIST1H2BOP23527 126 aa8.96□□□□□ -0.98
LINC00888-201ENST00000468380 HIST1H2BBP33778 126 aa8.96□□□□□ -0.98
LINC00888-201ENST00000468380 HIST1H2BDP58876 126 aa8.96□□□□□ -0.98
LINC00888-201ENST00000468380 HIST1H2BCP62807 126 aa8.96□□□□□ -0.98
LINC00888-201ENST00000468380 HIST2H2BEQ16778 126 aa8.96□□□□□ -0.98
LINC00888-201ENST00000468380 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.96□□□□□ -0.98
LINC00888-201ENST00000468380 HIST1H2BHQ93079 126 aa8.96□□□□□ -0.98
LINC00888-201ENST00000468380 HIST1H2BNQ99877 126 aa8.96□□□□□ -0.98
LINC00888-201ENST00000468380 HIST1H2BMQ99879 126 aa8.96□□□□□ -0.98
LINC00888-201ENST00000468380 ATOH7Q8N100 152 aa8.95□□□□□ -0.98
LINC00888-201ENST00000468380 KRTDAPP60985 99 aa8.94□□□□□ -0.98
LINC00888-201ENST00000468380 Q8N9P0 234 aaPredicted RBP8.94□□□□□ -0.98
LINC00888-201ENST00000468380 SIGMAR1Q99720 223 aa8.92□□□□□ -0.98
LINC00888-201ENST00000468380 MUC12Q9UKN1 5478 aa8.89□□□□□ -0.99
LINC00888-201ENST00000468380 A8MWP4 228 aa8.89□□□□□ -0.99
LINC00888-201ENST00000468380 MTURNQ8N3F0 131 aa8.89□□□□□ -0.99
LINC00888-201ENST00000468380 NDUFV3P56181 108 aaKnown RBP8.88□□□□□ -0.99
LINC00888-201ENST00000468380 BVES-AS1Q5T3Y7 98 aa8.87□□□□□ -0.99
LINC00888-201ENST00000468380 A0A1W2PNM2 257 aa8.86□□□□□ -0.99
LINC00888-201ENST00000468380 IGKV4-1P06312 121 aa8.86□□□□□ -0.99
LINC00888-201ENST00000468380 KRTAP20-1Q3LI63 56 aa8.85□□□□□ -0.99
LINC00888-201ENST00000468380 C12orf57Q99622 126 aa8.83□□□□□ -1
LINC00888-201ENST00000468380 H3BMG7 143 aa8.82□□□□□ -1
LINC00888-201ENST00000468380 SPINK7P58062 85 aa8.81□□□□□ -1
LINC00888-201ENST00000468380 DEFB116Q30KQ4 102 aa8.81□□□□□ -1
LINC00888-201ENST00000468380 FAM218AQ96MZ4 157 aa8.8□□□□□ -1
LINC00888-201ENST00000468380 IGHV6-1A0A0B4J1U7 121 aa8.78□□□□□ -1
LINC00888-201ENST00000468380 COA6Q5JTJ3 125 aaKnown RBP8.77□□□□□ -1.01
LINC00888-201ENST00000468380 LINC00472Q9H8W2 130 aa8.77□□□□□ -1.01
LINC00888-201ENST00000468380 SMCPP49901 116 aaPredicted RBP8.76□□□□□ -1.01
LINC00888-201ENST00000468380 ZCCHC13Q8WW36 166 aaKnown RBP8.74□□□□□ -1.01
LINC00888-201ENST00000468380 SNRPEP62304 92 aaKnown RBP8.73□□□□□ -1.01
LINC00888-201ENST00000468380 FABP2P12104 132 aa8.71□□□□□ -1.02
LINC00888-201ENST00000468380 TRBV7-4A0A0J9YYF1 115 aa8.69□□□□□ -1.02
LINC00888-201ENST00000468380 H0YGX0 51 aa8.69□□□□□ -1.02
LINC00888-201ENST00000468380 SNCGO76070 127 aa8.69□□□□□ -1.02
LINC00888-201ENST00000468380 WFDC13Q8IUB5 93 aa8.68□□□□□ -1.02
LINC00888-201ENST00000468380 ANKRD29Q8N6D5 301 aa8.67□□□□□ -1.02
LINC00888-201ENST00000468380 HIST1H4GQ99525 98 aa8.66□□□□□ -1.02
LINC00888-201ENST00000468380 A0A1B0GVX0 72 aa8.64□□□□□ -1.03
LINC00888-201ENST00000468380 C8orf87E5RJ46 101 aa8.64□□□□□ -1.03
LINC00888-201ENST00000468380 A0A1B0GV72 72 aa8.63□□□□□ -1.03
LINC00888-201ENST00000468380 RAB37Q96AX2 223 aa8.63□□□□□ -1.03
LINC00888-201ENST00000468380 A6NN06 94 aa8.62□□□□□ -1.03
LINC00888-201ENST00000468380 GHRHP01286 108 aa8.59□□□□□ -1.03
LINC00888-201ENST00000468380 A0A1B0GX51 115 aa8.58□□□□□ -1.04
LINC00888-201ENST00000468380 HSBP1L1C9JCN9 74 aa8.58□□□□□ -1.04
LINC00888-201ENST00000468380 KRTAP5-9P26371 169 aa8.58□□□□□ -1.04
LINC00888-201ENST00000468380 CCKP06307 115 aa8.57□□□□□ -1.04
LINC00888-201ENST00000468380 TMEM238LA0A1B0GVL6 79 aa8.56□□□□□ -1.04
LINC00888-201ENST00000468380 KMT2DO14686 5537 aa8.56□□□□□ -1.04
LINC00888-201ENST00000468380 TRACP01848 142 aa8.55□□□□□ -1.04
LINC00888-201ENST00000468380 MT1BP07438 61 aa8.55□□□□□ -1.04
LINC00888-201ENST00000468380 A0A0B4J2C4 111 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms