RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 IGLV7-43P04211 117 aa12.54□□□□□ -0.4
TMEM53-207ENST00000468117 TRBV7-4A0A0J9YYF1 115 aa12.53□□□□□ -0.4
TMEM53-207ENST00000468117 VPS13BQ7Z7G8 4022 aa12.51□□□□□ -0.41
TMEM53-207ENST00000468117 ACYP1P07311 99 aa12.5□□□□□ -0.41
TMEM53-207ENST00000468117 SPRR1BP22528 89 aa12.49□□□□□ -0.41
TMEM53-207ENST00000468117 PDE6GP18545 87 aa12.48□□□□□ -0.41
TMEM53-207ENST00000468117 XGP55808 180 aa12.47□□□□□ -0.41
TMEM53-207ENST00000468117 SPRR4Q96PI1 79 aa12.47□□□□□ -0.41
TMEM53-207ENST00000468117 APOBP04114 4563 aaKnown RBP12.47□□□□□ -0.41
TMEM53-207ENST00000468117 F8WEM9 126 aa12.47□□□□□ -0.41
TMEM53-207ENST00000468117 LINC00846Q9NV44 126 aa12.44□□□□□ -0.42
TMEM53-207ENST00000468117 ZNF706Q9Y5V0 76 aaPredicted RBP12.43□□□□□ -0.42
TMEM53-207ENST00000468117 A0A0G2JQZ4 141 aa12.4□□□□□ -0.42
TMEM53-207ENST00000468117 LINC00483Q53H64 154 aa12.4□□□□□ -0.42
TMEM53-207ENST00000468117 SMR3BP02814 79 aaPredicted RBP12.39□□□□□ -0.43
TMEM53-207ENST00000468117 ANAPC11Q9NYG5 84 aa12.39□□□□□ -0.43
TMEM53-207ENST00000468117 IGLV8-61A0A075B6I0 122 aa12.38□□□□□ -0.43
TMEM53-207ENST00000468117 IGFL1Q6UW32 110 aa12.37□□□□□ -0.43
TMEM53-207ENST00000468117 A0A1W2PNM2 257 aa12.37□□□□□ -0.43
TMEM53-207ENST00000468117 MT-ATP8P03928 68 aa12.36□□□□□ -0.43
TMEM53-207ENST00000468117 IGLV9-49A0A0B4J1Y8 123 aa12.35□□□□□ -0.43
TMEM53-207ENST00000468117 SIGMAR1Q99720 223 aa12.35□□□□□ -0.43
TMEM53-207ENST00000468117 RPL37AP61513 92 aaKnown RBP12.33□□□□□ -0.43
TMEM53-207ENST00000468117 C21orf62-AS1Q17RA5 79 aa12.33□□□□□ -0.43
TMEM53-207ENST00000468117 FAT1Q14517 4588 aa12.33□□□□□ -0.44
TMEM53-207ENST00000468117 Q8NBF4 154 aa12.33□□□□□ -0.44
TMEM53-207ENST00000468117 C9orf153Q5TBE3 101 aa12.31□□□□□ -0.44
TMEM53-207ENST00000468117 LINC00643Q86TS7 51 aa12.31□□□□□ -0.44
TMEM53-207ENST00000468117 Q6JHZ5 121 aa12.3□□□□□ -0.44
TMEM53-207ENST00000468117 UBL5Q9BZL1 73 aa12.3□□□□□ -0.44
TMEM53-207ENST00000468117 MOBPQ13875 183 aa12.27□□□□□ -0.45
TMEM53-207ENST00000468117 Q6ZVQ6 151 aa12.27□□□□□ -0.45
TMEM53-207ENST00000468117 CRYGAP11844 174 aa12.26□□□□□ -0.45
TMEM53-207ENST00000468117 A0A1B0GW54 56 aa12.23□□□□□ -0.45
TMEM53-207ENST00000468117 IGKV3D-7A0A0C4DH55 119 aa12.22□□□□□ -0.45
TMEM53-207ENST00000468117 KRTAP1-4P0C5Y4 121 aa12.2□□□□□ -0.46
TMEM53-207ENST00000468117 KRTAP10-4P60372 401 aaPredicted RBP12.2□□□□□ -0.46
TMEM53-207ENST00000468117 A0A087X002 238 aa12.2□□□□□ -0.46
TMEM53-207ENST00000468117 SPINK6Q6UWN8 80 aa12.2□□□□□ -0.46
TMEM53-207ENST00000468117 EPPK1P58107 5090 aaKnown RBP12.2□□□□□ -0.46
TMEM53-207ENST00000468117 HSPG2P98160 4391 aa12.19□□□□□ -0.46
TMEM53-207ENST00000468117 A0A087WSZ3 146 aa12.19□□□□□ -0.46
TMEM53-207ENST00000468117 NREPQ16612 68 aa12.19□□□□□ -0.46
TMEM53-207ENST00000468117 Q6Q795 121 aa12.18□□□□□ -0.46
TMEM53-207ENST00000468117 TRBV7-7A0A0K0K1E9 115 aa12.16□□□□□ -0.46
TMEM53-207ENST00000468117 CDK2AP2O75956 126 aa12.16□□□□□ -0.46
TMEM53-207ENST00000468117 HRCT1Q6UXD1 115 aa12.16□□□□□ -0.46
TMEM53-207ENST00000468117 FAM229BQ4G0N7 80 aa12.15□□□□□ -0.46
TMEM53-207ENST00000468117 KRTAP13-2Q52LG2 175 aa12.15□□□□□ -0.47
TMEM53-207ENST00000468117 PLA2G1BP04054 148 aaKnown RBP12.13□□□□□ -0.47
TMEM53-207ENST00000468117 ATP5EP2Q5VTU8 51 aa12.13□□□□□ -0.47
TMEM53-207ENST00000468117 RYR1P21817 5038 aa12.13□□□□□ -0.47
TMEM53-207ENST00000468117 SSBP3-AS1Q7Z2R9 100 aa12.1□□□□□ -0.47
TMEM53-207ENST00000468117 IMUPQ9GZP8 106 aa12.1□□□□□ -0.47
TMEM53-207ENST00000468117 FAM229AH3BQW9 127 aa12.1□□□□□ -0.47
TMEM53-207ENST00000468117 KIAA1109Q2LD37 5005 aa12.09□□□□□ -0.47
TMEM53-207ENST00000468117 CXCL6P80162 114 aa12.09□□□□□ -0.47
TMEM53-207ENST00000468117 BPY2O14599 106 aa12.07□□□□□ -0.48
TMEM53-207ENST00000468117 HIST1H4AP62805 103 aaKnown RBP12.07□□□□□ -0.48
TMEM53-207ENST00000468117 A0A087WVE0 104 aa12.04□□□□□ -0.48
TMEM53-207ENST00000468117 DEFB116Q30KQ4 102 aa12.04□□□□□ -0.48
TMEM53-207ENST00000468117 Q5VSD8 79 aa12.04□□□□□ -0.48
TMEM53-207ENST00000468117 SCGB1A1P11684 91 aa12.02□□□□□ -0.49
TMEM53-207ENST00000468117 Q8N9L7 120 aa12.02□□□□□ -0.49
TMEM53-207ENST00000468117 PRR26Q8N8Z3 221 aa12.01□□□□□ -0.49
TMEM53-207ENST00000468117 PKHD1L1Q86WI1 4243 aa12.01□□□□□ -0.49
TMEM53-207ENST00000468117 KRTAP17-1Q9BYP8 105 aa12.01□□□□□ -0.49
TMEM53-207ENST00000468117 TYMSOSQ8TAI1 123 aa12□□□□□ -0.49
TMEM53-207ENST00000468117 CD164Q04900 197 aa11.99□□□□□ -0.49
TMEM53-207ENST00000468117 LINC00472Q9H8W2 130 aa11.99□□□□□ -0.49
TMEM53-207ENST00000468117 DSCR10P59022 87 aa11.98□□□□□ -0.49
TMEM53-207ENST00000468117 SS18L2Q9UHA2 77 aa11.98□□□□□ -0.49
TMEM53-207ENST00000468117 FAM236AA0A1B0GUQ0 79 aa11.97□□□□□ -0.49
TMEM53-207ENST00000468117 FAM236BA0A1B0GV22 79 aa11.97□□□□□ -0.49
TMEM53-207ENST00000468117 IGKV4-1P06312 121 aa11.94□□□□□ -0.5
TMEM53-207ENST00000468117 Q96NJ1 140 aa11.94□□□□□ -0.5
TMEM53-207ENST00000468117 K7EQZ3 153 aa11.92□□□□□ -0.5
TMEM53-207ENST00000468117 Q8N1X5 172 aa11.89□□□□□ -0.51
TMEM53-207ENST00000468117 PCP4P48539 62 aa11.87□□□□□ -0.51
TMEM53-207ENST00000468117 C4orf48Q5BLP8 95 aa11.87□□□□□ -0.51
TMEM53-207ENST00000468117 LRP1Q07954 4544 aaKnown RBP11.87□□□□□ -0.51
TMEM53-207ENST00000468117 LINC00304Q8N9R0 145 aa11.86□□□□□ -0.51
TMEM53-207ENST00000468117 J3KT08 172 aa11.85□□□□□ -0.51
TMEM53-207ENST00000468117 A8MWP4 228 aa11.84□□□□□ -0.51
TMEM53-207ENST00000468117 FLG2Q5D862 2391 aaPredicted RBP11.83□□□□□ -0.52
TMEM53-207ENST00000468117 SPINK1P00995 79 aa11.82□□□□□ -0.52
TMEM53-207ENST00000468117 ASB16-AS1Q495Z4 193 aa11.82□□□□□ -0.52
TMEM53-207ENST00000468117 Q5XG85 94 aa11.82□□□□□ -0.52
TMEM53-207ENST00000468117 PRR15Q8IV56 129 aa11.81□□□□□ -0.52
TMEM53-207ENST00000468117 LIMD2Q9BT23 127 aa11.81□□□□□ -0.52
TMEM53-207ENST00000468117 ANAPC13Q9BS18 74 aa11.8□□□□□ -0.52
TMEM53-207ENST00000468117 NDUFB1O75438 58 aa11.77□□□□□ -0.52
TMEM53-207ENST00000468117 SPAG11AQ6PDA7 123 aa11.77□□□□□ -0.52
TMEM53-207ENST00000468117 ATOX1O00244 68 aa11.77□□□□□ -0.53
TMEM53-207ENST00000468117 TNXBP22105 4242 aa11.77□□□□□ -0.53
TMEM53-207ENST00000468117 C1orf195Q5TG92 126 aa11.76□□□□□ -0.53
TMEM53-207ENST00000468117 FAT3Q8TDW7 4589 aa11.75□□□□□ -0.53
TMEM53-207ENST00000468117 MYCBP2O75592 4640 aa11.75□□□□□ -0.53
TMEM53-207ENST00000468117 HCG22E2RYF7 251 aa11.74□□□□□ -0.53
TMEM53-207ENST00000468117 RPS29P62273 56 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms