RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 RPL37AP8A6NKH3 93 aa11.7□□□□□ -0.54
CAPN3-209ENST00000466222 FAM30AQ9NZY2 134 aa11.7□□□□□ -0.54
CAPN3-209ENST00000466222 A0A1B0GW54 56 aa11.69□□□□□ -0.54
CAPN3-209ENST00000466222 LINC00336Q6ZUF6 198 aa11.69□□□□□ -0.54
CAPN3-209ENST00000466222 KRTAP10-1P60331 282 aa11.68□□□□□ -0.54
CAPN3-209ENST00000466222 LRP1BQ9NZR2 4599 aa11.67□□□□□ -0.54
CAPN3-209ENST00000466222 A0A1B0GVY2 172 aa11.66□□□□□ -0.54
CAPN3-209ENST00000466222 SPRR1AP35321 89 aa11.66□□□□□ -0.54
CAPN3-209ENST00000466222 Q6ZRX8 168 aa11.66□□□□□ -0.54
CAPN3-209ENST00000466222 PHF5AQ7RTV0 110 aaKnown RBP11.66□□□□□ -0.54
CAPN3-209ENST00000466222 MRPL55Q7Z7F7 128 aaKnown RBP11.66□□□□□ -0.54
CAPN3-209ENST00000466222 LINC00474Q9P2X8 69 aa11.66□□□□□ -0.54
CAPN3-209ENST00000466222 IGLV1-50A0A075B6I6 118 aa11.66□□□□□ -0.54
CAPN3-209ENST00000466222 IGLV5-48A0A075B6I7 105 aa11.66□□□□□ -0.54
CAPN3-209ENST00000466222 KRTAP11-1Q8IUC1 163 aa11.65□□□□□ -0.54
CAPN3-209ENST00000466222 DYNC1H1Q14204 4646 aaKnown RBP11.65□□□□□ -0.54
CAPN3-209ENST00000466222 KRTAP4-16G5E9R7 235 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-209ENST00000466222 Q8N377 158 aa11.64□□□□□ -0.55
CAPN3-209ENST00000466222 PKIGQ9Y2B9 76 aa11.64□□□□□ -0.55
CAPN3-209ENST00000466222 C20orf197Q8N268 126 aa11.64□□□□□ -0.55
CAPN3-209ENST00000466222 ETDCA0A1B0GVM5 59 aa11.63□□□□□ -0.55
CAPN3-209ENST00000466222 NREPQ16612 68 aa11.62□□□□□ -0.55
CAPN3-209ENST00000466222 KLKP1Q107X0 134 aa11.61□□□□□ -0.55
CAPN3-209ENST00000466222 SCXQ7RTU7 201 aa11.59□□□□□ -0.55
CAPN3-209ENST00000466222 DEFB105AQ8NG35 78 aa11.59□□□□□ -0.55
CAPN3-209ENST00000466222 EPM2AB3EWF7 344 aa11.58□□□□□ -0.56
CAPN3-209ENST00000466222 Q9BRP9 147 aa11.58□□□□□ -0.56
CAPN3-209ENST00000466222 CIRBP-AS1Q8TBR5 109 aa11.57□□□□□ -0.56
CAPN3-209ENST00000466222 PLAC8Q9NZF1 115 aa11.57□□□□□ -0.56
CAPN3-209ENST00000466222 Q6ZSA8 131 aa11.56□□□□□ -0.56
CAPN3-209ENST00000466222 BPY2O14599 106 aa11.55□□□□□ -0.56
CAPN3-209ENST00000466222 ERC2-IT1O76042 136 aa11.55□□□□□ -0.56
CAPN3-209ENST00000466222 IGKV4-1P06312 121 aa11.55□□□□□ -0.56
CAPN3-209ENST00000466222 UBE2BP63146 152 aa11.55□□□□□ -0.56
CAPN3-209ENST00000466222 FAM236DA0A1B0GTK5 79 aa11.54□□□□□ -0.56
CAPN3-209ENST00000466222 NDUFC1O43677 76 aa11.54□□□□□ -0.56
CAPN3-209ENST00000466222 FAM236CP0DP71 79 aa11.54□□□□□ -0.56
CAPN3-209ENST00000466222 H7BZZ5 65 aa11.53□□□□□ -0.56
CAPN3-209ENST00000466222 C1orf137Q5JT78 98 aa11.52□□□□□ -0.57
CAPN3-209ENST00000466222 REG3GQ6UW15 175 aa11.51□□□□□ -0.57
CAPN3-209ENST00000466222 Q8NBF4 154 aa11.51□□□□□ -0.57
CAPN3-209ENST00000466222 A0A1W2PNM2 257 aa11.49□□□□□ -0.57
CAPN3-209ENST00000466222 SPRR4Q96PI1 79 aa11.49□□□□□ -0.57
CAPN3-209ENST00000466222 APOBP04114 4563 aaKnown RBP11.49□□□□□ -0.57
CAPN3-209ENST00000466222 EPPK1P58107 5090 aaKnown RBP11.48□□□□□ -0.57
CAPN3-209ENST00000466222 SRRM2Q9UQ35 2752 aaKnown RBP11.48□□□□□ -0.57
CAPN3-209ENST00000466222 ST20-AS1Q8NBB2 130 aa11.47□□□□□ -0.57
CAPN3-209ENST00000466222 ATP5EP56381 51 aaPredicted RBP11.46□□□□□ -0.58
CAPN3-209ENST00000466222 PRLHP81277 87 aa11.46□□□□□ -0.58
CAPN3-209ENST00000466222 SERP1Q9Y6X1 66 aa11.46□□□□□ -0.58
CAPN3-209ENST00000466222 Q8N9L7 120 aa11.45□□□□□ -0.58
CAPN3-209ENST00000466222 PSORS1C2Q9UIG4 136 aa11.45□□□□□ -0.58
CAPN3-209ENST00000466222 OCR1Q9BZK8 76 aa11.44□□□□□ -0.58
CAPN3-209ENST00000466222 SNURFQ9Y675 71 aa11.44□□□□□ -0.58
CAPN3-209ENST00000466222 OXTP01178 125 aa11.43□□□□□ -0.58
CAPN3-209ENST00000466222 F8WEM9 126 aa11.43□□□□□ -0.58
CAPN3-209ENST00000466222 TMEM254Q8TBM7 123 aa11.43□□□□□ -0.58
CAPN3-209ENST00000466222 SMIM29Q86T20 159 aa11.41□□□□□ -0.58
CAPN3-209ENST00000466222 VPS13BQ7Z7G8 4022 aa11.41□□□□□ -0.58
CAPN3-209ENST00000466222 FAT1Q14517 4588 aa11.39□□□□□ -0.59
CAPN3-209ENST00000466222 IGLV8-61A0A075B6I0 122 aa11.37□□□□□ -0.59
CAPN3-209ENST00000466222 SMR3BP02814 79 aaPredicted RBP11.37□□□□□ -0.59
CAPN3-209ENST00000466222 A0A0U1RQV1 116 aa11.36□□□□□ -0.59
CAPN3-209ENST00000466222 HIGD2AQ9BW72 106 aa11.36□□□□□ -0.59
CAPN3-209ENST00000466222 UBE2AP49459 152 aa11.35□□□□□ -0.59
CAPN3-209ENST00000466222 KRTAP13-1Q8IUC0 172 aa11.34□□□□□ -0.59
CAPN3-209ENST00000466222 H0Y9J4 135 aa11.33□□□□□ -0.6
CAPN3-209ENST00000466222 DSCR10P59022 87 aa11.33□□□□□ -0.6
CAPN3-209ENST00000466222 C5orf47Q569G3 176 aa11.33□□□□□ -0.6
CAPN3-209ENST00000466222 Q5XG85 94 aa11.31□□□□□ -0.6
CAPN3-209ENST00000466222 IGFL1Q6UW32 110 aa11.31□□□□□ -0.6
CAPN3-209ENST00000466222 HSPG2P98160 4391 aa11.3□□□□□ -0.6
CAPN3-209ENST00000466222 SPRR1BP22528 89 aa11.29□□□□□ -0.6
CAPN3-209ENST00000466222 KIAA1109Q2LD37 5005 aa11.27□□□□□ -0.6
CAPN3-209ENST00000466222 IGLV7-43P04211 117 aa11.27□□□□□ -0.6
CAPN3-209ENST00000466222 SMIM26A0A096LP01 95 aa11.26□□□□□ -0.61
CAPN3-209ENST00000466222 K7EQZ3 153 aa11.26□□□□□ -0.61
CAPN3-209ENST00000466222 ZNF861PO60384 105 aa11.26□□□□□ -0.61
CAPN3-209ENST00000466222 RYR1P21817 5038 aa11.25□□□□□ -0.61
CAPN3-209ENST00000466222 HCG22E2RYF7 251 aa11.24□□□□□ -0.61
CAPN3-209ENST00000466222 C4orf26Q17RF5 130 aa11.21□□□□□ -0.62
CAPN3-209ENST00000466222 A0A087WSZ3 146 aa11.2□□□□□ -0.62
CAPN3-209ENST00000466222 RPL37AP61513 92 aaKnown RBP11.2□□□□□ -0.62
CAPN3-209ENST00000466222 ANAPC11Q9NYG5 84 aa11.19□□□□□ -0.62
CAPN3-209ENST00000466222 KRTAP17-1Q9BYP8 105 aa11.19□□□□□ -0.62
CAPN3-209ENST00000466222 ZCCHC13Q8WW36 166 aaKnown RBP11.17□□□□□ -0.62
CAPN3-209ENST00000466222 KRTAP10-4P60372 401 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-209ENST00000466222 CDK2AP2O75956 126 aa11.15□□□□□ -0.62
CAPN3-209ENST00000466222 HRCT1Q6UXD1 115 aa11.15□□□□□ -0.62
CAPN3-209ENST00000466222 A0A0G2JQZ4 141 aa11.15□□□□□ -0.62
CAPN3-209ENST00000466222 FP248Q71RG6 208 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-209ENST00000466222 KRTAP29-1A8MX34 341 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-209ENST00000466222 A8MWP4 228 aa11.07□□□□□ -0.64
CAPN3-209ENST00000466222 NDUFB1O75438 58 aa11.07□□□□□ -0.64
CAPN3-209ENST00000466222 DEFB116Q30KQ4 102 aa11.07□□□□□ -0.64
CAPN3-209ENST00000466222 PRR15Q8IV56 129 aa11.07□□□□□ -0.64
CAPN3-209ENST00000466222 LINC00472Q9H8W2 130 aa11.07□□□□□ -0.64
CAPN3-209ENST00000466222 MP68P56378 58 aa11.07□□□□□ -0.64
CAPN3-209ENST00000466222 LINC00483Q53H64 154 aa11.06□□□□□ -0.64
CAPN3-209ENST00000466222 WFDC13Q8IUB5 93 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms