RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 A4D1N5 150 aa5.19□□□□□ -1.58
GPNMB-206ENST00000465673 SCGB1D4Q6XE38 83 aa5.19□□□□□ -1.58
GPNMB-206ENST00000465673 CLEC2BQ92478 149 aa5.18□□□□□ -1.58
GPNMB-206ENST00000465673 NHP2Q9NX24 153 aaKnown RBP5.18□□□□□ -1.58
GPNMB-206ENST00000465673 COLCA2A8K830 154 aa5.17□□□□□ -1.58
GPNMB-206ENST00000465673 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
GPNMB-206ENST00000465673 ANKRD39Q53RE8 183 aa5.17□□□□□ -1.58
GPNMB-206ENST00000465673 OCIAD2Q56VL3 154 aa5.17□□□□□ -1.58
GPNMB-206ENST00000465673 Q6JHZ5 121 aa5.17□□□□□ -1.58
GPNMB-206ENST00000465673 Q6ZQY7 126 aa5.17□□□□□ -1.58
GPNMB-206ENST00000465673 SLC7A5P1Q8MH63 180 aa5.17□□□□□ -1.58
GPNMB-206ENST00000465673 TRBV20-1A0A075B6N2 111 aa5.16□□□□□ -1.58
GPNMB-206ENST00000465673 A8MUU9 505 aa5.16□□□□□ -1.58
GPNMB-206ENST00000465673 KRTAP16-1A8MUX0 517 aa5.16□□□□□ -1.58
GPNMB-206ENST00000465673 IFITM1P13164 125 aa5.16□□□□□ -1.58
GPNMB-206ENST00000465673 PET117Q6UWS5 81 aa5.16□□□□□ -1.58
GPNMB-206ENST00000465673 LINC00575Q6W349 94 aa5.16□□□□□ -1.58
GPNMB-206ENST00000465673 C20orf166-AS1Q96NR2 134 aa5.16□□□□□ -1.58
GPNMB-206ENST00000465673 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
GPNMB-206ENST00000465673 H3BUT2 72 aa5.15□□□□□ -1.59
GPNMB-206ENST00000465673 LST1O00453 97 aa5.15□□□□□ -1.59
GPNMB-206ENST00000465673 C3orf79P0CE67 100 aa5.15□□□□□ -1.59
GPNMB-206ENST00000465673 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.59
GPNMB-206ENST00000465673 TRAV13-2A0A0B4J235 113 aa5.14□□□□□ -1.59
GPNMB-206ENST00000465673 FAM236DA0A1B0GTK5 79 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 hADV29S1A0JD25 119 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 HIST1H2BKO60814 126 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 HIST1H2BJP06899 126 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 FAM236CP0DP71 79 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 HIST1H2BOP23527 126 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 HIST1H2BBP33778 126 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 HIST1H2BDP58876 126 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 HIST1H2BCP62807 126 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 HIST2H2BEQ16778 126 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.13□□□□□ -1.59
GPNMB-206ENST00000465673 ATOH7Q8N100 152 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 COPS9Q8WXC6 57 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 HIST1H2BHQ93079 126 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 HIST1H2BNQ99877 126 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 HIST1H2BMQ99879 126 aa5.13□□□□□ -1.59
GPNMB-206ENST00000465673 DSCR10P59022 87 aa5.12□□□□□ -1.59
GPNMB-206ENST00000465673 KRTDAPP60985 99 aa5.12□□□□□ -1.59
GPNMB-206ENST00000465673 VAMP3Q15836 100 aa5.11□□□□□ -1.59
GPNMB-206ENST00000465673 Q6ZVH6 145 aa5.11□□□□□ -1.59
GPNMB-206ENST00000465673 SNHG12Q9BXW3 62 aa5.09□□□□□ -1.59
GPNMB-206ENST00000465673 HRES1P13985 223 aa5.08□□□□□ -1.6
GPNMB-206ENST00000465673 KRTAP19-6Q3LI70 58 aa5.08□□□□□ -1.6
GPNMB-206ENST00000465673 MPLKIPQ8TAP9 179 aa5.08□□□□□ -1.6
GPNMB-206ENST00000465673 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.07□□□□□ -1.6
GPNMB-206ENST00000465673 A0A087WSZ3 146 aa5.06□□□□□ -1.6
GPNMB-206ENST00000465673 C12orf57Q99622 126 aa5.05□□□□□ -1.6
GPNMB-206ENST00000465673 SS18L2Q9UHA2 77 aa5.05□□□□□ -1.6
GPNMB-206ENST00000465673 NOTCH2NLQ7Z3S9 236 aa5.04□□□□□ -1.6
GPNMB-206ENST00000465673 RBM12B-AS1Q9P1G2 102 aa5.04□□□□□ -1.6
GPNMB-206ENST00000465673 TEN1Q86WV5 123 aa5.03□□□□□ -1.6
GPNMB-206ENST00000465673 PPDPFLQ8WWR9 84 aa5.03□□□□□ -1.6
GPNMB-206ENST00000465673 SCGB1D1O95968 90 aa5.02□□□□□ -1.61
GPNMB-206ENST00000465673 LINC00313P59037 77 aa5.02□□□□□ -1.61
GPNMB-206ENST00000465673 SIGMAR1Q99720 223 aa5.02□□□□□ -1.61
GPNMB-206ENST00000465673 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
GPNMB-206ENST00000465673 LINC00846Q9NV44 126 aa5.01□□□□□ -1.61
GPNMB-206ENST00000465673 NDUFV3P56181 108 aaKnown RBP5□□□□□ -1.61
GPNMB-206ENST00000465673 COA6Q5JTJ3 125 aaKnown RBP5□□□□□ -1.61
GPNMB-206ENST00000465673 A0A1W2PNM2 257 aa4.99□□□□□ -1.61
GPNMB-206ENST00000465673 DEFB116Q30KQ4 102 aa4.99□□□□□ -1.61
GPNMB-206ENST00000465673 BVES-AS1Q5T3Y7 98 aa4.99□□□□□ -1.61
GPNMB-206ENST00000465673 FAM218AQ96MZ4 157 aa4.99□□□□□ -1.61
GPNMB-206ENST00000465673 IGKV4-1P06312 121 aa4.98□□□□□ -1.61
GPNMB-206ENST00000465673 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
GPNMB-206ENST00000465673 H3BMG7 143 aa4.97□□□□□ -1.61
GPNMB-206ENST00000465673 NEBP20929 6669 aa4.96□□□□□ -1.62
GPNMB-206ENST00000465673 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.62
GPNMB-206ENST00000465673 A0A1B0GV72 72 aa4.94□□□□□ -1.62
GPNMB-206ENST00000465673 FABP2P12104 132 aa4.94□□□□□ -1.62
GPNMB-206ENST00000465673 SNRPEP62304 92 aaKnown RBP4.94□□□□□ -1.62
GPNMB-206ENST00000465673 HIST1H4GQ99525 98 aa4.94□□□□□ -1.62
GPNMB-206ENST00000465673 IGHV6-1A0A0B4J1U7 121 aa4.93□□□□□ -1.62
GPNMB-206ENST00000465673 SPINK7P58062 85 aa4.91□□□□□ -1.62
GPNMB-206ENST00000465673 MTURNQ8N3F0 131 aa4.91□□□□□ -1.62
GPNMB-206ENST00000465673 LINC00472Q9H8W2 130 aa4.91□□□□□ -1.62
GPNMB-206ENST00000465673 HSBP1L1C9JCN9 74 aa4.9□□□□□ -1.63
GPNMB-206ENST00000465673 H0YGX0 51 aa4.9□□□□□ -1.63
GPNMB-206ENST00000465673 A8MWP4 228 aa4.89□□□□□ -1.63
GPNMB-206ENST00000465673 SNCGO76070 127 aa4.88□□□□□ -1.63
GPNMB-206ENST00000465673 ANKRD29Q8N6D5 301 aa4.88□□□□□ -1.63
GPNMB-206ENST00000465673 ZCCHC13Q8WW36 166 aaKnown RBP4.88□□□□□ -1.63
GPNMB-206ENST00000465673 RAB37Q96AX2 223 aa4.88□□□□□ -1.63
GPNMB-206ENST00000465673 HIST1H2BLQ99880 126 aa4.88□□□□□ -1.63
GPNMB-206ENST00000465673 TRBV7-4A0A0J9YYF1 115 aa4.87□□□□□ -1.63
GPNMB-206ENST00000465673 WFDC13Q8IUB5 93 aa4.86□□□□□ -1.63
GPNMB-206ENST00000465673 HIST3H2BBQ8N257 126 aa4.86□□□□□ -1.63
GPNMB-206ENST00000465673 A0A1B0GVX0 72 aa4.85□□□□□ -1.63
GPNMB-206ENST00000465673 COX8AP10176 69 aa4.85□□□□□ -1.63
GPNMB-206ENST00000465673 A0A0B4J2C4 111 aa4.84□□□□□ -1.63
GPNMB-206ENST00000465673 CCKP06307 115 aa4.84□□□□□ -1.63
GPNMB-206ENST00000465673 A0A1B0GX51 115 aa4.83□□□□□ -1.64
GPNMB-206ENST00000465673 C8orf87E5RJ46 101 aa4.83□□□□□ -1.64
GPNMB-206ENST00000465673 TRACP01848 142 aa4.83□□□□□ -1.64
GPNMB-206ENST00000465673 S100A2P29034 98 aa4.83□□□□□ -1.64
GPNMB-206ENST00000465673 C14orf144Q96I85 54 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms