RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 ZCCHC13Q8WW36 166 aaKnown RBP5.61□□□□□ -1.51
HDAC9-219ENST00000461159 B9D2Q9BPU9 175 aa5.6□□□□□ -1.51
HDAC9-219ENST00000461159 ANGP03950 147 aaKnown RBP5.59□□□□□ -1.51
HDAC9-219ENST00000461159 CASC2Q6XLA1 102 aa5.59□□□□□ -1.51
HDAC9-219ENST00000461159 FAM30AQ9NZY2 134 aa5.59□□□□□ -1.51
HDAC9-219ENST00000461159 IGLV10-54A0A075B6I4 117 aa5.59□□□□□ -1.52
HDAC9-219ENST00000461159 REG3AQ06141 175 aa5.59□□□□□ -1.52
HDAC9-219ENST00000461159 PRAC1Q96KF2 57 aa5.59□□□□□ -1.52
HDAC9-219ENST00000461159 NDUFB1O75438 58 aa5.58□□□□□ -1.52
HDAC9-219ENST00000461159 Q8NDZ9 215 aa5.58□□□□□ -1.52
HDAC9-219ENST00000461159 KMT2AQ03164 3969 aa5.57□□□□□ -1.52
HDAC9-219ENST00000461159 H3BNG1 76 aa5.57□□□□□ -1.52
HDAC9-219ENST00000461159 IGLV6-57P01721 117 aa5.57□□□□□ -1.52
HDAC9-219ENST00000461159 SPAG11BQ08648 103 aa5.57□□□□□ -1.52
HDAC9-219ENST00000461159 Q6ZQY7 126 aa5.57□□□□□ -1.52
HDAC9-219ENST00000461159 RETNLBQ9BQ08 111 aa5.57□□□□□ -1.52
HDAC9-219ENST00000461159 Q9BRP9 147 aa5.57□□□□□ -1.52
HDAC9-219ENST00000461159 DNAH1Q9P2D7 4330 aa5.57□□□□□ -1.52
HDAC9-219ENST00000461159 KRTAP21-3Q3LHN1 58 aa5.57□□□□□ -1.52
HDAC9-219ENST00000461159 WFDC10BQ8IUB3 73 aa5.57□□□□□ -1.52
HDAC9-219ENST00000461159 NOTCH2NLQ7Z3S9 236 aa5.56□□□□□ -1.52
HDAC9-219ENST00000461159 M0R2N4 97 aa5.56□□□□□ -1.52
HDAC9-219ENST00000461159 UNQ6190/PRO20217Q6UXQ8 127 aa5.56□□□□□ -1.52
HDAC9-219ENST00000461159 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.56□□□□□ -1.52
HDAC9-219ENST00000461159 C10orf25Q5T742 122 aa5.55□□□□□ -1.52
HDAC9-219ENST00000461159 LELP1Q5T871 98 aa5.55□□□□□ -1.52
HDAC9-219ENST00000461159 KLK12Q9UKR0 248 aa5.54□□□□□ -1.52
HDAC9-219ENST00000461159 DYNC2H1Q8NCM8 4307 aaKnown RBP5.54□□□□□ -1.52
HDAC9-219ENST00000461159 COX7BP24311 80 aa5.53□□□□□ -1.52
HDAC9-219ENST00000461159 GVQW2A0A096LPI5 108 aaPredicted RBP5.53□□□□□ -1.52
HDAC9-219ENST00000461159 LINC00476Q8WZB0 136 aa5.53□□□□□ -1.52
HDAC9-219ENST00000461159 IGKV4-1P06312 121 aa5.52□□□□□ -1.53
HDAC9-219ENST00000461159 LINC00208Q96KT6 92 aa5.52□□□□□ -1.53
HDAC9-219ENST00000461159 SPANXA2-OT1Q8N9U9 137 aa5.51□□□□□ -1.53
HDAC9-219ENST00000461159 XAGE1AQ9HD64 81 aa5.5□□□□□ -1.53
HDAC9-219ENST00000461159 VPS13DQ5THJ4 4388 aa5.49□□□□□ -1.53
HDAC9-219ENST00000461159 PRR34Q9NV39 138 aa5.49□□□□□ -1.53
HDAC9-219ENST00000461159 C6orf48Q9UBA6 75 aa5.49□□□□□ -1.53
HDAC9-219ENST00000461159 DNAH2Q9P225 4427 aa5.48□□□□□ -1.53
HDAC9-219ENST00000461159 PLAC8Q9NZF1 115 aa5.48□□□□□ -1.53
HDAC9-219ENST00000461159 ADM2Q7Z4H4 148 aa5.47□□□□□ -1.53
HDAC9-219ENST00000461159 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
HDAC9-219ENST00000461159 HYDINQ4G0P3 5121 aa5.46□□□□□ -1.53
HDAC9-219ENST00000461159 APLNQ9ULZ1 77 aa5.46□□□□□ -1.54
HDAC9-219ENST00000461159 UBE2DNLQ8IWF7 75 aa5.46□□□□□ -1.54
HDAC9-219ENST00000461159 CAMK2N2Q96S95 79 aa5.46□□□□□ -1.54
HDAC9-219ENST00000461159 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.45□□□□□ -1.54
HDAC9-219ENST00000461159 PLA2G2DQ9UNK4 145 aa5.45□□□□□ -1.54
HDAC9-219ENST00000461159 IGKV2D-24A0A075B6R9 120 aa5.45□□□□□ -1.54
HDAC9-219ENST00000461159 ETDCA0A1B0GVM5 59 aa5.45□□□□□ -1.54
HDAC9-219ENST00000461159 A0A1B0GW54 56 aa5.45□□□□□ -1.54
HDAC9-219ENST00000461159 RTL8CO15255 209 aa5.45□□□□□ -1.54
HDAC9-219ENST00000461159 PRR4Q16378 134 aa5.45□□□□□ -1.54
HDAC9-219ENST00000461159 KRTAP1-5Q9BYS1 174 aa5.45□□□□□ -1.54
HDAC9-219ENST00000461159 CNBPP62633 177 aaKnown RBP5.44□□□□□ -1.54
HDAC9-219ENST00000461159 HIGD2BQ4VC39 106 aa5.44□□□□□ -1.54
HDAC9-219ENST00000461159 LINC01556Q5JQF7 62 aa5.44□□□□□ -1.54
HDAC9-219ENST00000461159 CASC10Q5T4H9 136 aa5.44□□□□□ -1.54
HDAC9-219ENST00000461159 C1orf134Q5TEV5 83 aa5.44□□□□□ -1.54
HDAC9-219ENST00000461159 Q8N9L7 120 aa5.43□□□□□ -1.54
HDAC9-219ENST00000461159 NUPR2A6NF83 97 aa5.42□□□□□ -1.54
HDAC9-219ENST00000461159 DNAH10OSP0CZ25 163 aa5.42□□□□□ -1.54
HDAC9-219ENST00000461159 KRTAP26-1Q6PEX3 210 aa5.42□□□□□ -1.54
HDAC9-219ENST00000461159 SMIM29Q86T20 159 aa5.42□□□□□ -1.54
HDAC9-219ENST00000461159 ROMO1P60602 79 aa5.42□□□□□ -1.54
HDAC9-219ENST00000461159 A0A1W2PNM2 257 aa5.41□□□□□ -1.54
HDAC9-219ENST00000461159 SPINK7P58062 85 aa5.4□□□□□ -1.54
HDAC9-219ENST00000461159 FRAS1Q86XX4 4008 aa5.4□□□□□ -1.54
HDAC9-219ENST00000461159 KCNQ1DNQ9H478 68 aa5.4□□□□□ -1.55
HDAC9-219ENST00000461159 KMT2CQ8NEZ4 4911 aaKnown RBP5.39□□□□□ -1.55
HDAC9-219ENST00000461159 SACSQ9NZJ4 4579 aa5.38□□□□□ -1.55
HDAC9-219ENST00000461159 DEFB105AQ8NG35 78 aa5.38□□□□□ -1.55
HDAC9-219ENST00000461159 IGLV5-48A0A075B6I7 105 aa5.38□□□□□ -1.55
HDAC9-219ENST00000461159 C15orf56Q8N910 161 aa5.38□□□□□ -1.55
HDAC9-219ENST00000461159 H3BPC8 53 aa5.37□□□□□ -1.55
HDAC9-219ENST00000461159 LY6G6CO95867 125 aa5.37□□□□□ -1.55
HDAC9-219ENST00000461159 CSAG1Q6PB30 78 aa5.37□□□□□ -1.55
HDAC9-219ENST00000461159 Q8N377 158 aa5.37□□□□□ -1.55
HDAC9-219ENST00000461159 WWC2-AS2Q96NR7 200 aa5.37□□□□□ -1.55
HDAC9-219ENST00000461159 DHRS4-AS1Q9P1J3 65 aa5.37□□□□□ -1.55
HDAC9-219ENST00000461159 COA5Q86WW8 74 aa5.36□□□□□ -1.55
HDAC9-219ENST00000461159 Q6ZR54 194 aa5.35□□□□□ -1.55
HDAC9-219ENST00000461159 ST20-AS1Q8NBB2 130 aa5.35□□□□□ -1.55
HDAC9-219ENST00000461159 C7orf33Q8WU49 177 aa5.35□□□□□ -1.55
HDAC9-219ENST00000461159 DNAH6Q9C0G6 4158 aa5.35□□□□□ -1.55
HDAC9-219ENST00000461159 NBDYA0A0U1RRE5 68 aa5.34□□□□□ -1.55
HDAC9-219ENST00000461159 HECTD4Q9Y4D8 3996 aa5.34□□□□□ -1.55
HDAC9-219ENST00000461159 C1orf137Q5JT78 98 aa5.34□□□□□ -1.55
HDAC9-219ENST00000461159 SPAG11AQ6PDA7 123 aa5.34□□□□□ -1.55
HDAC9-219ENST00000461159 Q6ZRX8 168 aa5.33□□□□□ -1.56
HDAC9-219ENST00000461159 Q8NBF4 154 aa5.33□□□□□ -1.56
HDAC9-219ENST00000461159 H0Y9P7 68 aa5.32□□□□□ -1.56
HDAC9-219ENST00000461159 DNAH17Q9UFH2 4485 aa5.31□□□□□ -1.56
HDAC9-219ENST00000461159 SPRR4Q96PI1 79 aa5.31□□□□□ -1.56
HDAC9-219ENST00000461159 KRTAP16-1A8MUX0 517 aa5.3□□□□□ -1.56
HDAC9-219ENST00000461159 TLX1NBP0CAT3 122 aa5.3□□□□□ -1.56
HDAC9-219ENST00000461159 DNAH11Q96DT5 4516 aa5.3□□□□□ -1.56
HDAC9-219ENST00000461159 FAT2Q9NYQ8 4349 aa5.3□□□□□ -1.56
HDAC9-219ENST00000461159 IGLV5-37A0A075B6J1 123 aa5.29□□□□□ -1.56
HDAC9-219ENST00000461159 RPL37AP8A6NKH3 93 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms