RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 LINC00315P59091 139 aa3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 PRR4Q16378 134 aa3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 ASB16-AS1Q495Z4 193 aa3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 DIRC1Q969H9 104 aa3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 CYP4F30PQ9H0H9 118 aa3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 LINC00846Q9NV44 126 aa3.18□□□□□ -1.9
ATPAF1-203ENST00000460928 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 A0A087WVE0 104 aa3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 hDV103S1A0JD37 113 aa3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 H0YGX0 51 aa3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 MGPP08493 103 aa3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 CIRBPQ14011 172 aaKnown RBP3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 HIGD2BQ4VC39 106 aa3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 SPANXN1Q5VSR9 72 aa3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 UBL5Q9BZL1 73 aa3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 C22orf24Q9Y442 160 aa3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 KIF25-AS1Q9Y6Z4 181 aa3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 FAT2Q9NYQ8 4349 aa3.17□□□□□ -1.9
ATPAF1-203ENST00000460928 FUSP35637 526 aaKnown RBP eCLIP3.16□□□□□ -1.9
ATPAF1-203ENST00000460928 KIAA0087Q14695 138 aa3.16□□□□□ -1.9
ATPAF1-203ENST00000460928 NKAPP1Q8N9T2 125 aa3.16□□□□□ -1.9
ATPAF1-203ENST00000460928 RPL39LQ96EH5 51 aaKnown RBP3.16□□□□□ -1.9
ATPAF1-203ENST00000460928 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
ATPAF1-203ENST00000460928 DNAH11Q96DT5 4516 aa3.16□□□□□ -1.9
ATPAF1-203ENST00000460928 TRAV23DV6A0A075B6W5 121 aa3.15□□□□□ -1.91
ATPAF1-203ENST00000460928 A6NN06 94 aa3.15□□□□□ -1.91
ATPAF1-203ENST00000460928 A8MUN3 132 aa3.15□□□□□ -1.91
ATPAF1-203ENST00000460928 H3BQ85 93 aa3.15□□□□□ -1.91
ATPAF1-203ENST00000460928 WFDC10BQ8IUB3 73 aa3.15□□□□□ -1.91
ATPAF1-203ENST00000460928 UBE2DNLQ8IWF7 75 aa3.15□□□□□ -1.91
ATPAF1-203ENST00000460928 TMEM254Q8TBM7 123 aa3.15□□□□□ -1.91
ATPAF1-203ENST00000460928 RMI2Q96E14 147 aa3.15□□□□□ -1.91
ATPAF1-203ENST00000460928 LIMD2Q9BT23 127 aa3.15□□□□□ -1.91
ATPAF1-203ENST00000460928 PRO0255Q9UI72 69 aa3.15□□□□□ -1.91
ATPAF1-203ENST00000460928 PKD1P98161 4303 aa3.14□□□□□ -1.91
ATPAF1-203ENST00000460928 M0QY20 66 aa3.14□□□□□ -1.91
ATPAF1-203ENST00000460928 PDE6GP18545 87 aa3.14□□□□□ -1.91
ATPAF1-203ENST00000460928 SRRM2Q9UQ35 2752 aaKnown RBP3.14□□□□□ -1.91
ATPAF1-203ENST00000460928 TRBV6-5A0A0K0K1A5 114 aa3.13□□□□□ -1.91
ATPAF1-203ENST00000460928 TRBV6-4A0A1B0GX49 114 aa3.13□□□□□ -1.91
ATPAF1-203ENST00000460928 NDUFA1O15239 70 aa3.13□□□□□ -1.91
ATPAF1-203ENST00000460928 IGHV3-30-3P0DP02 117 aa3.13□□□□□ -1.91
ATPAF1-203ENST00000460928 SYCNQ0VAF6 134 aa3.13□□□□□ -1.91
ATPAF1-203ENST00000460928 FAM229BQ4G0N7 80 aa3.13□□□□□ -1.91
ATPAF1-203ENST00000460928 SOSTDC1Q6X4U4 206 aa3.13□□□□□ -1.91
ATPAF1-203ENST00000460928 NTM-AS1Q6ZSK4 140 aa3.13□□□□□ -1.91
ATPAF1-203ENST00000460928 LINC00269Q8N2A0 174 aa3.13□□□□□ -1.91
ATPAF1-203ENST00000460928 CHCHD10Q8WYQ3 142 aaPredicted RBP3.13□□□□□ -1.91
ATPAF1-203ENST00000460928 PKHD1P08F94 4074 aa3.13□□□□□ -1.91
ATPAF1-203ENST00000460928 TRAV22A0A0B4J277 110 aa3.12□□□□□ -1.91
ATPAF1-203ENST00000460928 POLR2KP53803 58 aaKnown RBP3.12□□□□□ -1.91
ATPAF1-203ENST00000460928 NREPQ16612 68 aa3.12□□□□□ -1.91
ATPAF1-203ENST00000460928 ENHOQ6UWT2 76 aa3.12□□□□□ -1.91
ATPAF1-203ENST00000460928 TYMSOSQ8TAI1 123 aa3.12□□□□□ -1.91
ATPAF1-203ENST00000460928 LINC00167Q96N53 147 aa3.12□□□□□ -1.91
ATPAF1-203ENST00000460928 C14orf132Q9NPU4 83 aa3.12□□□□□ -1.91
ATPAF1-203ENST00000460928 ORMDL1Q9P0S3 153 aa3.12□□□□□ -1.91
ATPAF1-203ENST00000460928 NDUFA12Q9UI09 145 aa3.12□□□□□ -1.91
ATPAF1-203ENST00000460928 NBDYA0A0U1RRE5 68 aa3.11□□□□□ -1.91
ATPAF1-203ENST00000460928 H3BNG1 76 aa3.11□□□□□ -1.91
ATPAF1-203ENST00000460928 RTL8CO15255 209 aa3.11□□□□□ -1.91
ATPAF1-203ENST00000460928 CCL18P55774 89 aa3.11□□□□□ -1.91
ATPAF1-203ENST00000460928 ELOF1P60002 83 aaKnown RBP3.11□□□□□ -1.91
ATPAF1-203ENST00000460928 Q6ZR54 194 aa3.11□□□□□ -1.91
ATPAF1-203ENST00000460928 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
ATPAF1-203ENST00000460928 SNURFQ9Y675 71 aa3.11□□□□□ -1.91
ATPAF1-203ENST00000460928 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
ATPAF1-203ENST00000460928 LOC110117498A0A087WWA1 95 aa3.1□□□□□ -1.91
ATPAF1-203ENST00000460928 TRBV6-8A0A0A6YYG3 113 aa3.1□□□□□ -1.91
ATPAF1-203ENST00000460928 IGHV3OR16-9A0A0B4J2B5 98 aa3.1□□□□□ -1.91
ATPAF1-203ENST00000460928 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
ATPAF1-203ENST00000460928 MP68P56378 58 aa3.1□□□□□ -1.91
ATPAF1-203ENST00000460928 LINC01554Q52M75 96 aa3.1□□□□□ -1.91
ATPAF1-203ENST00000460928 CLPSL2Q6UWE3 100 aa3.1□□□□□ -1.91
ATPAF1-203ENST00000460928 LINC00308Q8TCZ7 52 aa3.1□□□□□ -1.91
ATPAF1-203ENST00000460928 CDC42SE1Q9NRR8 79 aa3.1□□□□□ -1.91
ATPAF1-203ENST00000460928 DYNC1H1Q14204 4646 aaKnown RBP3.09□□□□□ -1.91
ATPAF1-203ENST00000460928 TRBV10-1A0A0K0K1A3 114 aa3.09□□□□□ -1.91
ATPAF1-203ENST00000460928 C16orf90A8MZG2 172 aa3.09□□□□□ -1.91
ATPAF1-203ENST00000460928 H0Y9J4 135 aa3.09□□□□□ -1.91
ATPAF1-203ENST00000460928 NDUFB1O75438 58 aa3.09□□□□□ -1.91
ATPAF1-203ENST00000460928 CRPP02741 224 aa3.09□□□□□ -1.91
ATPAF1-203ENST00000460928 RNASE13Q5GAN3 156 aaKnown RBP3.09□□□□□ -1.91
ATPAF1-203ENST00000460928 LELP1Q5T871 98 aa3.09□□□□□ -1.91
ATPAF1-203ENST00000460928 Q5VV11 94 aa3.09□□□□□ -1.91
ATPAF1-203ENST00000460928 ZNF625Q96I27 306 aaPredicted RBP3.09□□□□□ -1.91
ATPAF1-203ENST00000460928 KLK12Q9UKR0 248 aa3.09□□□□□ -1.91
ATPAF1-203ENST00000460928 DNAH5Q8TE73 4624 aa3.08□□□□□ -1.92
ATPAF1-203ENST00000460928 IGLV4-60A0A075B6I1 120 aa3.08□□□□□ -1.92
ATPAF1-203ENST00000460928 IGKV3OR2-268A0A0C4DH90 116 aa3.08□□□□□ -1.92
ATPAF1-203ENST00000460928 LOC101927531A0A1B0GV80 90 aa3.08□□□□□ -1.92
ATPAF1-203ENST00000460928 HCG22E2RYF7 251 aa3.08□□□□□ -1.92
ATPAF1-203ENST00000460928 LECT2O14960 151 aa3.08□□□□□ -1.92
ATPAF1-203ENST00000460928 PSCAO43653 123 aa3.08□□□□□ -1.92
ATPAF1-203ENST00000460928 DNAH10OSP0CZ25 163 aa3.08□□□□□ -1.92
ATPAF1-203ENST00000460928 FAM19A3Q7Z5A8 133 aa3.08□□□□□ -1.92
ATPAF1-203ENST00000460928 CHCHD7Q9BUK0 85 aa3.08□□□□□ -1.92
ATPAF1-203ENST00000460928 IGLV10-54A0A075B6I4 117 aa3.07□□□□□ -1.92
ATPAF1-203ENST00000460928 LINC00313P59037 77 aa3.07□□□□□ -1.92
ATPAF1-203ENST00000460928 RPL39P62891 51 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 236.1 ms