RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 FAM30AQ9NZY2 134 aa11.41□□□□□ -0.58
HPS3-202ENST00000460120 BCE1O60756 84 aa11.4□□□□□ -0.58
HPS3-202ENST00000460120 CNBPP62633 177 aaKnown RBP11.4□□□□□ -0.58
HPS3-202ENST00000460120 SERP1Q9Y6X1 66 aa11.39□□□□□ -0.59
HPS3-202ENST00000460120 PLECQ15149 4684 aaKnown RBP11.38□□□□□ -0.59
HPS3-202ENST00000460120 KLKP1Q107X0 134 aa11.38□□□□□ -0.59
HPS3-202ENST00000460120 IGFL1Q6UW32 110 aa11.38□□□□□ -0.59
HPS3-202ENST00000460120 K7EQZ3 153 aa11.37□□□□□ -0.59
HPS3-202ENST00000460120 C1orf195Q5TG92 126 aa11.37□□□□□ -0.59
HPS3-202ENST00000460120 BRK1Q8WUW1 75 aa11.37□□□□□ -0.59
HPS3-202ENST00000460120 TMEM254Q8TBM7 123 aa11.37□□□□□ -0.59
HPS3-202ENST00000460120 LINC00474Q9P2X8 69 aa11.37□□□□□ -0.59
HPS3-202ENST00000460120 PANO1I0J062 215 aa11.36□□□□□ -0.59
HPS3-202ENST00000460120 UBE2AP49459 152 aa11.36□□□□□ -0.59
HPS3-202ENST00000460120 A0A087WSZ3 146 aa11.34□□□□□ -0.59
HPS3-202ENST00000460120 DSCR10P59022 87 aa11.34□□□□□ -0.59
HPS3-202ENST00000460120 SPRR4Q96PI1 79 aa11.34□□□□□ -0.59
HPS3-202ENST00000460120 OCR1Q9BZK8 76 aa11.33□□□□□ -0.6
HPS3-202ENST00000460120 B9D2Q9BPU9 175 aa11.32□□□□□ -0.6
HPS3-202ENST00000460120 NBDYA0A0U1RRE5 68 aa11.32□□□□□ -0.6
HPS3-202ENST00000460120 SMIM26A0A096LP01 95 aa11.3□□□□□ -0.6
HPS3-202ENST00000460120 RPL37AP61513 92 aaKnown RBP11.3□□□□□ -0.6
HPS3-202ENST00000460120 C14orf177Q52M58 125 aa11.3□□□□□ -0.6
HPS3-202ENST00000460120 LRCOL1A6NCL2 159 aa11.3□□□□□ -0.6
HPS3-202ENST00000460120 C9orf163Q8N9P6 203 aa11.28□□□□□ -0.6
HPS3-202ENST00000460120 WFDC13Q8IUB5 93 aa11.27□□□□□ -0.61
HPS3-202ENST00000460120 STARD9Q9P2P6 4700 aa11.26□□□□□ -0.61
HPS3-202ENST00000460120 A0A1B0GW54 56 aa11.24□□□□□ -0.61
HPS3-202ENST00000460120 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.23□□□□□ -0.61
HPS3-202ENST00000460120 NUPR2A6NF83 97 aa11.22□□□□□ -0.61
HPS3-202ENST00000460120 Q6ZRN7 208 aaPredicted RBP11.22□□□□□ -0.61
HPS3-202ENST00000460120 DYNC2H1Q8NCM8 4307 aaKnown RBP11.21□□□□□ -0.61
HPS3-202ENST00000460120 HCG22E2RYF7 251 aa11.2□□□□□ -0.62
HPS3-202ENST00000460120 MPLKIPQ8TAP9 179 aa11.2□□□□□ -0.62
HPS3-202ENST00000460120 PRKDCP78527 4128 aaKnown RBP11.19□□□□□ -0.62
HPS3-202ENST00000460120 IGLV9-49A0A0B4J1Y8 123 aa11.19□□□□□ -0.62
HPS3-202ENST00000460120 NDUFC1O43677 76 aa11.19□□□□□ -0.62
HPS3-202ENST00000460120 FAM229BQ4G0N7 80 aa11.17□□□□□ -0.62
HPS3-202ENST00000460120 MEGF8Q7Z7M0 2845 aa11.16□□□□□ -0.62
HPS3-202ENST00000460120 IGLV8-61A0A075B6I0 122 aa11.15□□□□□ -0.62
HPS3-202ENST00000460120 KMT2AQ03164 3969 aa11.13□□□□□ -0.63
HPS3-202ENST00000460120 PRR4Q16378 134 aa11.13□□□□□ -0.63
HPS3-202ENST00000460120 A0A087WTM6 91 aa11.12□□□□□ -0.63
HPS3-202ENST00000460120 ANAPC11Q9NYG5 84 aa11.12□□□□□ -0.63
HPS3-202ENST00000460120 SPACA4Q8TDM5 124 aa11.11□□□□□ -0.63
HPS3-202ENST00000460120 H0Y9J4 135 aa11.1□□□□□ -0.63
HPS3-202ENST00000460120 TGP01266 2768 aa11.1□□□□□ -0.63
HPS3-202ENST00000460120 RTL8CO15255 209 aa11.08□□□□□ -0.64
HPS3-202ENST00000460120 SPRR1BP22528 89 aa11.08□□□□□ -0.64
HPS3-202ENST00000460120 FRAS1Q86XX4 4008 aa11.07□□□□□ -0.64
HPS3-202ENST00000460120 KRTAP13-1Q8IUC0 172 aa11.06□□□□□ -0.64
HPS3-202ENST00000460120 PMAIP1Q13794 54 aa11.05□□□□□ -0.64
HPS3-202ENST00000460120 CASC2Q6XLA1 102 aa11.05□□□□□ -0.64
HPS3-202ENST00000460120 VPS13DQ5THJ4 4388 aa11.04□□□□□ -0.64
HPS3-202ENST00000460120 HECTD4Q9Y4D8 3996 aa11.04□□□□□ -0.64
HPS3-202ENST00000460120 ATP5EP56381 51 aaPredicted RBP11.03□□□□□ -0.64
HPS3-202ENST00000460120 PSORS1C2Q9UIG4 136 aa11.03□□□□□ -0.64
HPS3-202ENST00000460120 DNAH2Q9P225 4427 aa11.03□□□□□ -0.64
HPS3-202ENST00000460120 LINC00472Q9H8W2 130 aa11.03□□□□□ -0.64
HPS3-202ENST00000460120 DNHD1Q96M86 4753 aa11.03□□□□□ -0.64
HPS3-202ENST00000460120 PRR15Q8IV56 129 aa11.02□□□□□ -0.65
HPS3-202ENST00000460120 LCE6AA0A183 80 aa11.01□□□□□ -0.65
HPS3-202ENST00000460120 LINC00208Q96KT6 92 aa11.01□□□□□ -0.65
HPS3-202ENST00000460120 A8MWP4 228 aa11□□□□□ -0.65
HPS3-202ENST00000460120 FBN3Q75N90 2809 aa10.99□□□□□ -0.65
HPS3-202ENST00000460120 MOBPQ13875 183 aa10.99□□□□□ -0.65
HPS3-202ENST00000460120 IGLV5-52A0A0A0MRZ9 124 aa10.98□□□□□ -0.65
HPS3-202ENST00000460120 LY6G6CO95867 125 aa10.98□□□□□ -0.65
HPS3-202ENST00000460120 ZCCHC13Q8WW36 166 aaKnown RBP10.98□□□□□ -0.65
HPS3-202ENST00000460120 KRTAP29-1A8MX34 341 aaPredicted RBP10.98□□□□□ -0.65
HPS3-202ENST00000460120 MP68P56378 58 aa10.96□□□□□ -0.65
HPS3-202ENST00000460120 H0Y9P7 68 aa10.95□□□□□ -0.66
HPS3-202ENST00000460120 Q6ZR54 194 aa10.93□□□□□ -0.66
HPS3-202ENST00000460120 C1orf64Q8NEQ6 169 aa10.93□□□□□ -0.66
HPS3-202ENST00000460120 C1orf134Q5TEV5 83 aa10.92□□□□□ -0.66
HPS3-202ENST00000460120 DNAH8Q96JB1 4490 aa10.91□□□□□ -0.66
HPS3-202ENST00000460120 MMP24-AS1A0A0U1RRL7 71 aa10.9□□□□□ -0.66
HPS3-202ENST00000460120 NDUFB1O75438 58 aa10.9□□□□□ -0.66
HPS3-202ENST00000460120 IGHV6-1A0A0B4J1U7 121 aa10.9□□□□□ -0.66
HPS3-202ENST00000460120 WWC2-AS2Q96NR7 200 aa10.9□□□□□ -0.66
HPS3-202ENST00000460120 Q96NJ1 140 aa10.89□□□□□ -0.67
HPS3-202ENST00000460120 hDV103S1A0JD37 113 aa10.88□□□□□ -0.67
HPS3-202ENST00000460120 ZNF861PO60384 105 aa10.88□□□□□ -0.67
HPS3-202ENST00000460120 DNAH17Q9UFH2 4485 aa10.88□□□□□ -0.67
HPS3-202ENST00000460120 TRAV22A0A0B4J277 110 aa10.87□□□□□ -0.67
HPS3-202ENST00000460120 PLAC8Q9NZF1 115 aa10.87□□□□□ -0.67
HPS3-202ENST00000460120 NDUFS5O43920 106 aa10.86□□□□□ -0.67
HPS3-202ENST00000460120 LINC00483Q53H64 154 aa10.86□□□□□ -0.67
HPS3-202ENST00000460120 SPINK6Q6UWN8 80 aa10.86□□□□□ -0.67
HPS3-202ENST00000460120 ZNF706Q9Y5V0 76 aaPredicted RBP10.86□□□□□ -0.67
HPS3-202ENST00000460120 DNAH6Q9C0G6 4158 aa10.86□□□□□ -0.67
HPS3-202ENST00000460120 CIRBP-AS1Q8TBR5 109 aa10.83□□□□□ -0.68
HPS3-202ENST00000460120 CD164Q04900 197 aa10.82□□□□□ -0.68
HPS3-202ENST00000460120 PSPHP1O15172 72 aa10.81□□□□□ -0.68
HPS3-202ENST00000460120 KRTAP10-2P60368 255 aa10.81□□□□□ -0.68
HPS3-202ENST00000460120 CDK2AP2O75956 126 aa10.81□□□□□ -0.68
HPS3-202ENST00000460120 A0A087X002 238 aa10.8□□□□□ -0.68
HPS3-202ENST00000460120 PCOTHQ58A44 107 aa10.8□□□□□ -0.68
HPS3-202ENST00000460120 NOTCH2NLQ7Z3S9 236 aa10.8□□□□□ -0.68
HPS3-202ENST00000460120 A8MU10 97 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms