RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 IGLV9-49A0A0B4J1Y8 123 aa5.9□□□□□ -1.46
NUDCD3-203ENST00000460110 DEFB116Q30KQ4 102 aa5.9□□□□□ -1.46
NUDCD3-203ENST00000460110 KRTAP11-1Q8IUC1 163 aa5.9□□□□□ -1.46
NUDCD3-203ENST00000460110 LINC00476Q8WZB0 136 aa5.9□□□□□ -1.46
NUDCD3-203ENST00000460110 Q8N9L7 120 aa5.9□□□□□ -1.47
NUDCD3-203ENST00000460110 TRBV7-6A0A0J9YX20 115 aa5.89□□□□□ -1.47
NUDCD3-203ENST00000460110 Q6ZRN7 208 aaPredicted RBP5.89□□□□□ -1.47
NUDCD3-203ENST00000460110 PLA2G2DQ9UNK4 145 aa5.88□□□□□ -1.47
NUDCD3-203ENST00000460110 ANAPC11Q9NYG5 84 aa5.88□□□□□ -1.47
NUDCD3-203ENST00000460110 Q6ZVQ6 151 aa5.88□□□□□ -1.47
NUDCD3-203ENST00000460110 STARD9Q9P2P6 4700 aa5.87□□□□□ -1.47
NUDCD3-203ENST00000460110 PDE6GP18545 87 aa5.87□□□□□ -1.47
NUDCD3-203ENST00000460110 H3BQ85 93 aa5.86□□□□□ -1.47
NUDCD3-203ENST00000460110 OBSCN-AS1Q96MR7 158 aa5.86□□□□□ -1.47
NUDCD3-203ENST00000460110 IGLV5-37A0A075B6J1 123 aa5.86□□□□□ -1.47
NUDCD3-203ENST00000460110 DNAH7Q8WXX0 4024 aa5.85□□□□□ -1.47
NUDCD3-203ENST00000460110 H7BZZ5 65 aa5.85□□□□□ -1.47
NUDCD3-203ENST00000460110 KRTAP10-2P60368 255 aa5.85□□□□□ -1.47
NUDCD3-203ENST00000460110 Q6ZR54 194 aa5.85□□□□□ -1.47
NUDCD3-203ENST00000460110 ATP5EP2Q5VTU8 51 aa5.85□□□□□ -1.47
NUDCD3-203ENST00000460110 TRAV7A0A075B6U4 112 aa5.84□□□□□ -1.47
NUDCD3-203ENST00000460110 BPY2O14599 106 aa5.84□□□□□ -1.47
NUDCD3-203ENST00000460110 A0A087WSZ3 146 aa5.84□□□□□ -1.48
NUDCD3-203ENST00000460110 LINC01547P58512 204 aaPredicted RBP5.84□□□□□ -1.48
NUDCD3-203ENST00000460110 KRTAP4-16G5E9R7 235 aaPredicted RBP5.83□□□□□ -1.48
NUDCD3-203ENST00000460110 SPRR1AP35321 89 aa5.83□□□□□ -1.48
NUDCD3-203ENST00000460110 TRBV7-4A0A0J9YYF1 115 aa5.83□□□□□ -1.48
NUDCD3-203ENST00000460110 PSORS1C2Q9UIG4 136 aa5.83□□□□□ -1.48
NUDCD3-203ENST00000460110 LOC110117498A0A087WWA1 95 aa5.82□□□□□ -1.48
NUDCD3-203ENST00000460110 FP248Q71RG6 208 aaPredicted RBP5.82□□□□□ -1.48
NUDCD3-203ENST00000460110 BCE1O60756 84 aa5.81□□□□□ -1.48
NUDCD3-203ENST00000460110 SPACA4Q8TDM5 124 aa5.81□□□□□ -1.48
NUDCD3-203ENST00000460110 FAM30AQ9NZY2 134 aa5.81□□□□□ -1.48
NUDCD3-203ENST00000460110 A0A1W2PNM2 257 aa5.8□□□□□ -1.48
NUDCD3-203ENST00000460110 KMT2AQ03164 3969 aa5.8□□□□□ -1.48
NUDCD3-203ENST00000460110 IGFL1Q6UW32 110 aa5.79□□□□□ -1.48
NUDCD3-203ENST00000460110 Q8NBF4 154 aa5.78□□□□□ -1.48
NUDCD3-203ENST00000460110 CIRBP-AS1Q8TBR5 109 aa5.78□□□□□ -1.48
NUDCD3-203ENST00000460110 NDUFC1O43677 76 aa5.77□□□□□ -1.49
NUDCD3-203ENST00000460110 MOBPQ13875 183 aa5.77□□□□□ -1.49
NUDCD3-203ENST00000460110 SMR3BP02814 79 aaPredicted RBP5.77□□□□□ -1.49
NUDCD3-203ENST00000460110 KLKP1Q107X0 134 aa5.77□□□□□ -1.49
NUDCD3-203ENST00000460110 SPINK6Q6UWN8 80 aa5.77□□□□□ -1.49
NUDCD3-203ENST00000460110 IGLV5-48A0A075B6I7 105 aa5.76□□□□□ -1.49
NUDCD3-203ENST00000460110 H0Y9J4 135 aa5.76□□□□□ -1.49
NUDCD3-203ENST00000460110 RPL37AP61513 92 aaKnown RBP5.76□□□□□ -1.49
NUDCD3-203ENST00000460110 SMIM29Q86T20 159 aa5.76□□□□□ -1.49
NUDCD3-203ENST00000460110 WFDC13Q8IUB5 93 aa5.76□□□□□ -1.49
NUDCD3-203ENST00000460110 DNAH1Q9P2D7 4330 aa5.75□□□□□ -1.49
NUDCD3-203ENST00000460110 KRTAP10-1P60331 282 aa5.75□□□□□ -1.49
NUDCD3-203ENST00000460110 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
NUDCD3-203ENST00000460110 KRTAP21-3Q3LHN1 58 aa5.75□□□□□ -1.49
NUDCD3-203ENST00000460110 TMEM254Q8TBM7 123 aa5.75□□□□□ -1.49
NUDCD3-203ENST00000460110 ATP5EP56381 51 aaPredicted RBP5.73□□□□□ -1.49
NUDCD3-203ENST00000460110 ZNF861PO60384 105 aa5.73□□□□□ -1.49
NUDCD3-203ENST00000460110 PSPHP1O15172 72 aa5.72□□□□□ -1.49
NUDCD3-203ENST00000460110 FAM229BQ4G0N7 80 aa5.72□□□□□ -1.49
NUDCD3-203ENST00000460110 VPS13DQ5THJ4 4388 aa5.72□□□□□ -1.49
NUDCD3-203ENST00000460110 PLAC8Q9NZF1 115 aa5.72□□□□□ -1.49
NUDCD3-203ENST00000460110 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
NUDCD3-203ENST00000460110 CDK2AP2O75956 126 aa5.7□□□□□ -1.5
NUDCD3-203ENST00000460110 ZNF706Q9Y5V0 76 aaPredicted RBP5.7□□□□□ -1.5
NUDCD3-203ENST00000460110 K7EQZ3 153 aa5.7□□□□□ -1.5
NUDCD3-203ENST00000460110 IGLV7-43P04211 117 aa5.7□□□□□ -1.5
NUDCD3-203ENST00000460110 CXCL6P80162 114 aa5.69□□□□□ -1.5
NUDCD3-203ENST00000460110 FLG2Q5D862 2391 aaPredicted RBP5.69□□□□□ -1.5
NUDCD3-203ENST00000460110 PRR4Q16378 134 aa5.69□□□□□ -1.5
NUDCD3-203ENST00000460110 IGKV4-1P06312 121 aa5.68□□□□□ -1.5
NUDCD3-203ENST00000460110 NDUFS5O43920 106 aa5.68□□□□□ -1.5
NUDCD3-203ENST00000460110 DNAH11Q96DT5 4516 aa5.67□□□□□ -1.5
NUDCD3-203ENST00000460110 NDUFB1O75438 58 aa5.66□□□□□ -1.5
NUDCD3-203ENST00000460110 DMBT1Q9UGM3 2413 aaPredicted RBP5.65□□□□□ -1.5
NUDCD3-203ENST00000460110 SPTSSBQ8NFR3 76 aa5.65□□□□□ -1.5
NUDCD3-203ENST00000460110 IGHV6-1A0A0B4J1U7 121 aa5.65□□□□□ -1.51
NUDCD3-203ENST00000460110 DNAH2Q9P225 4427 aa5.64□□□□□ -1.51
NUDCD3-203ENST00000460110 LCE6AA0A183 80 aa5.63□□□□□ -1.51
NUDCD3-203ENST00000460110 DSCR10P59022 87 aa5.63□□□□□ -1.51
NUDCD3-203ENST00000460110 C4orf48Q5BLP8 95 aa5.63□□□□□ -1.51
NUDCD3-203ENST00000460110 KRTAP13-1Q8IUC0 172 aa5.63□□□□□ -1.51
NUDCD3-203ENST00000460110 PLA2G1BP04054 148 aaKnown RBP5.62□□□□□ -1.51
NUDCD3-203ENST00000460110 HCG22E2RYF7 251 aa5.61□□□□□ -1.51
NUDCD3-203ENST00000460110 DYNC2H1Q8NCM8 4307 aaKnown RBP5.61□□□□□ -1.51
NUDCD3-203ENST00000460110 SPRR1BP22528 89 aa5.6□□□□□ -1.51
NUDCD3-203ENST00000460110 PRR15Q8IV56 129 aa5.6□□□□□ -1.51
NUDCD3-203ENST00000460110 HYDINQ4G0P3 5121 aa5.6□□□□□ -1.51
NUDCD3-203ENST00000460110 CASC2Q6XLA1 102 aa5.6□□□□□ -1.51
NUDCD3-203ENST00000460110 A0A087X002 238 aa5.59□□□□□ -1.51
NUDCD3-203ENST00000460110 DNAH6Q9C0G6 4158 aa5.58□□□□□ -1.52
NUDCD3-203ENST00000460110 CD164Q04900 197 aa5.58□□□□□ -1.52
NUDCD3-203ENST00000460110 C1orf64Q8NEQ6 169 aa5.58□□□□□ -1.52
NUDCD3-203ENST00000460110 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
NUDCD3-203ENST00000460110 IGLV8-61A0A075B6I0 122 aa5.57□□□□□ -1.52
NUDCD3-203ENST00000460110 A0A1B0GW54 56 aa5.57□□□□□ -1.52
NUDCD3-203ENST00000460110 A8MUN3 132 aa5.57□□□□□ -1.52
NUDCD3-203ENST00000460110 RETNLBQ9BQ08 111 aa5.57□□□□□ -1.52
NUDCD3-203ENST00000460110 TRAV22A0A0B4J277 110 aa5.56□□□□□ -1.52
NUDCD3-203ENST00000460110 TYMSOSQ8TAI1 123 aa5.56□□□□□ -1.52
NUDCD3-203ENST00000460110 hDV103S1A0JD37 113 aa5.55□□□□□ -1.52
NUDCD3-203ENST00000460110 A8MWP4 228 aa5.55□□□□□ -1.52
NUDCD3-203ENST00000460110 PRR26Q8N8Z3 221 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms