RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 KRTAP7-1Q8IUC3 87 aa5.64□□□□□ -1.51
VPS50-207ENST00000458530 VPS13BQ7Z7G8 4022 aa5.63□□□□□ -1.51
VPS50-207ENST00000458530 EPM2AB3EWF7 344 aa5.62□□□□□ -1.51
VPS50-207ENST00000458530 B5MCH6 92 aa5.62□□□□□ -1.51
VPS50-207ENST00000458530 Q6ZQY7 126 aa5.62□□□□□ -1.51
VPS50-207ENST00000458530 PHF5AQ7RTV0 110 aaKnown RBP5.62□□□□□ -1.51
VPS50-207ENST00000458530 PLAC8Q9NZF1 115 aa5.62□□□□□ -1.51
VPS50-207ENST00000458530 KRTAP4-16G5E9R7 235 aaPredicted RBP5.61□□□□□ -1.51
VPS50-207ENST00000458530 JMJD7-PLA2G4BH0Y9G9 81 aa5.61□□□□□ -1.51
VPS50-207ENST00000458530 FAT1Q14517 4588 aa5.61□□□□□ -1.51
VPS50-207ENST00000458530 C21orf62-AS1Q17RA5 79 aa5.61□□□□□ -1.51
VPS50-207ENST00000458530 FAM19A1Q7Z5A9 133 aa5.61□□□□□ -1.51
VPS50-207ENST00000458530 H0Y9J4 135 aa5.6□□□□□ -1.51
VPS50-207ENST00000458530 BCE1O60756 84 aa5.59□□□□□ -1.51
VPS50-207ENST00000458530 UBE2AP49459 152 aa5.59□□□□□ -1.51
VPS50-207ENST00000458530 TEX49A0A1B0GTD5 131 aa5.58□□□□□ -1.52
VPS50-207ENST00000458530 PANO1I0J062 215 aa5.58□□□□□ -1.52
VPS50-207ENST00000458530 LAMTOR3Q9UHA4 124 aa5.58□□□□□ -1.52
VPS50-207ENST00000458530 FUSP35637 526 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS50-207ENST00000458530 PDE6GP18545 87 aa5.56□□□□□ -1.52
VPS50-207ENST00000458530 XGP55808 180 aa5.56□□□□□ -1.52
VPS50-207ENST00000458530 Q6ZSA8 131 aa5.56□□□□□ -1.52
VPS50-207ENST00000458530 Q9BRP9 147 aa5.56□□□□□ -1.52
VPS50-207ENST00000458530 FAM240AA0A1B0GVK7 77 aa5.55□□□□□ -1.52
VPS50-207ENST00000458530 ACYP1P07311 99 aa5.55□□□□□ -1.52
VPS50-207ENST00000458530 PRLHP81277 87 aa5.55□□□□□ -1.52
VPS50-207ENST00000458530 RBM3P98179 157 aaKnown RBP5.55□□□□□ -1.52
VPS50-207ENST00000458530 OBSCN-AS1Q96MR7 158 aa5.55□□□□□ -1.52
VPS50-207ENST00000458530 HIGD2AQ9BW72 106 aa5.55□□□□□ -1.52
VPS50-207ENST00000458530 IGLV5-48A0A075B6I7 105 aa5.54□□□□□ -1.52
VPS50-207ENST00000458530 SMCR5Q8TEV8 140 aa5.54□□□□□ -1.52
VPS50-207ENST00000458530 DSCR8Q96T75 97 aa5.54□□□□□ -1.52
VPS50-207ENST00000458530 ZNF706Q9Y5V0 76 aaPredicted RBP5.54□□□□□ -1.52
VPS50-207ENST00000458530 F8WEM9 126 aa5.53□□□□□ -1.52
VPS50-207ENST00000458530 NDUFV3P56181 108 aaKnown RBP5.53□□□□□ -1.52
VPS50-207ENST00000458530 KRTAP10-1P60331 282 aa5.53□□□□□ -1.52
VPS50-207ENST00000458530 Q5VSD8 79 aa5.53□□□□□ -1.52
VPS50-207ENST00000458530 C14orf132Q9NPU4 83 aa5.53□□□□□ -1.52
VPS50-207ENST00000458530 HMCN2Q8NDA2 5059 aa5.53□□□□□ -1.52
VPS50-207ENST00000458530 LOC110117498A0A087WWA1 95 aa5.52□□□□□ -1.53
VPS50-207ENST00000458530 C1orf137Q5JT78 98 aa5.52□□□□□ -1.53
VPS50-207ENST00000458530 SCXQ7RTU7 201 aa5.52□□□□□ -1.53
VPS50-207ENST00000458530 DEFB105AQ8NG35 78 aa5.52□□□□□ -1.53
VPS50-207ENST00000458530 CIRBP-AS1Q8TBR5 109 aa5.52□□□□□ -1.53
VPS50-207ENST00000458530 VPS25Q9BRG1 176 aa5.52□□□□□ -1.53
VPS50-207ENST00000458530 PSORS1C2Q9UIG4 136 aa5.52□□□□□ -1.53
VPS50-207ENST00000458530 GAGE2AQ6NT46 116 aa5.51□□□□□ -1.53
VPS50-207ENST00000458530 KRTAP13-1Q8IUC0 172 aa5.51□□□□□ -1.53
VPS50-207ENST00000458530 KRTAP11-1Q8IUC1 163 aa5.51□□□□□ -1.53
VPS50-207ENST00000458530 Q8N377 158 aa5.51□□□□□ -1.53
VPS50-207ENST00000458530 ERC2-IT1O76042 136 aa5.5□□□□□ -1.53
VPS50-207ENST00000458530 CCKP06307 115 aa5.5□□□□□ -1.53
VPS50-207ENST00000458530 CDIP1Q9H305 208 aa5.5□□□□□ -1.53
VPS50-207ENST00000458530 FAM30AQ9NZY2 134 aa5.5□□□□□ -1.53
VPS50-207ENST00000458530 A0A1B0GV72 72 aa5.49□□□□□ -1.53
VPS50-207ENST00000458530 ZNF861PO60384 105 aa5.49□□□□□ -1.53
VPS50-207ENST00000458530 SPRR1BP22528 89 aa5.49□□□□□ -1.53
VPS50-207ENST00000458530 LINC01547P58512 204 aaPredicted RBP5.49□□□□□ -1.53
VPS50-207ENST00000458530 ST20-AS1Q8NBB2 130 aa5.49□□□□□ -1.53
VPS50-207ENST00000458530 TRBV7-4A0A0J9YYF1 115 aa5.48□□□□□ -1.53
VPS50-207ENST00000458530 IGLV7-43P04211 117 aa5.48□□□□□ -1.53
VPS50-207ENST00000458530 Q6ZQT0 140 aa5.48□□□□□ -1.53
VPS50-207ENST00000458530 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
VPS50-207ENST00000458530 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
VPS50-207ENST00000458530 A0A1B0GW54 56 aa5.46□□□□□ -1.54
VPS50-207ENST00000458530 Q6JHZ5 121 aa5.46□□□□□ -1.54
VPS50-207ENST00000458530 SPRR4Q96PI1 79 aa5.45□□□□□ -1.54
VPS50-207ENST00000458530 IGLV8-61A0A075B6I0 122 aa5.44□□□□□ -1.54
VPS50-207ENST00000458530 RPL37AP61513 92 aaKnown RBP5.44□□□□□ -1.54
VPS50-207ENST00000458530 LINC00483Q53H64 154 aa5.44□□□□□ -1.54
VPS50-207ENST00000458530 C3orf22Q8N5N4 141 aa5.44□□□□□ -1.54
VPS50-207ENST00000458530 UBL5Q9BZL1 73 aa5.44□□□□□ -1.54
VPS50-207ENST00000458530 SMIM29Q86T20 159 aa5.43□□□□□ -1.54
VPS50-207ENST00000458530 LINC00643Q86TS7 51 aa5.43□□□□□ -1.54
VPS50-207ENST00000458530 SMR3BP02814 79 aaPredicted RBP5.42□□□□□ -1.54
VPS50-207ENST00000458530 ATP5EP2Q5VTU8 51 aa5.42□□□□□ -1.54
VPS50-207ENST00000458530 SIGMAR1Q99720 223 aa5.42□□□□□ -1.54
VPS50-207ENST00000458530 LRP1Q07954 4544 aaKnown RBP5.42□□□□□ -1.54
VPS50-207ENST00000458530 HAMPP81172 84 aa5.41□□□□□ -1.54
VPS50-207ENST00000458530 C9orf153Q5TBE3 101 aa5.41□□□□□ -1.54
VPS50-207ENST00000458530 Q8NBF4 154 aa5.41□□□□□ -1.54
VPS50-207ENST00000458530 LINC00846Q9NV44 126 aa5.4□□□□□ -1.54
VPS50-207ENST00000458530 IGFL1Q6UW32 110 aa5.39□□□□□ -1.55
VPS50-207ENST00000458530 CRYGAP11844 174 aa5.38□□□□□ -1.55
VPS50-207ENST00000458530 FAM229BQ4G0N7 80 aa5.38□□□□□ -1.55
VPS50-207ENST00000458530 DNAH8Q96JB1 4490 aa5.37□□□□□ -1.55
VPS50-207ENST00000458530 IGLV9-49A0A0B4J1Y8 123 aa5.37□□□□□ -1.55
VPS50-207ENST00000458530 Q6Q795 121 aa5.37□□□□□ -1.55
VPS50-207ENST00000458530 SPINK6Q6UWN8 80 aa5.37□□□□□ -1.55
VPS50-207ENST00000458530 A0A1W2PNM2 257 aa5.36□□□□□ -1.55
VPS50-207ENST00000458530 KRTAP10-4P60372 401 aaPredicted RBP5.36□□□□□ -1.55
VPS50-207ENST00000458530 NREPQ16612 68 aa5.36□□□□□ -1.55
VPS50-207ENST00000458530 Q6ZVQ6 151 aa5.36□□□□□ -1.55
VPS50-207ENST00000458530 IMUPQ9GZP8 106 aa5.36□□□□□ -1.55
VPS50-207ENST00000458530 TRBV7-7A0A0K0K1E9 115 aa5.35□□□□□ -1.55
VPS50-207ENST00000458530 MT-ATP8P03928 68 aa5.35□□□□□ -1.55
VPS50-207ENST00000458530 MOBPQ13875 183 aa5.35□□□□□ -1.55
VPS50-207ENST00000458530 FAT3Q8TDW7 4589 aa5.35□□□□□ -1.55
VPS50-207ENST00000458530 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
VPS50-207ENST00000458530 OXTP01178 125 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms