RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 DYNC2H1Q8NCM8 4307 aaKnown RBP12.91□□□□□ -0.34
CRAT-207ENST00000458362 IGLV8-61A0A075B6I0 122 aa12.9□□□□□ -0.35
CRAT-207ENST00000458362 DEFB116Q30KQ4 102 aa12.88□□□□□ -0.35
CRAT-207ENST00000458362 C5orf47Q569G3 176 aa12.87□□□□□ -0.35
CRAT-207ENST00000458362 HRCT1Q6UXD1 115 aa12.87□□□□□ -0.35
CRAT-207ENST00000458362 ATP5EP56381 51 aaPredicted RBP12.86□□□□□ -0.35
CRAT-207ENST00000458362 C14orf177Q52M58 125 aa12.86□□□□□ -0.35
CRAT-207ENST00000458362 UBE2AP49459 152 aa12.86□□□□□ -0.35
CRAT-207ENST00000458362 LCE6AA0A183 80 aa12.85□□□□□ -0.35
CRAT-207ENST00000458362 A0A087WSZ3 146 aa12.85□□□□□ -0.35
CRAT-207ENST00000458362 TENM2Q9NT68 2774 aa12.84□□□□□ -0.35
CRAT-207ENST00000458362 LRCOL1A6NCL2 159 aa12.83□□□□□ -0.35
CRAT-207ENST00000458362 CSMD3Q7Z407 3707 aa12.83□□□□□ -0.36
CRAT-207ENST00000458362 DNAH7Q8WXX0 4024 aa12.83□□□□□ -0.36
CRAT-207ENST00000458362 SRRM2Q9UQ35 2752 aaKnown RBP12.83□□□□□ -0.36
CRAT-207ENST00000458362 C9orf163Q8N9P6 203 aa12.82□□□□□ -0.36
CRAT-207ENST00000458362 HCG22E2RYF7 251 aa12.81□□□□□ -0.36
CRAT-207ENST00000458362 FP248Q71RG6 208 aaPredicted RBP12.81□□□□□ -0.36
CRAT-207ENST00000458362 B9D2Q9BPU9 175 aa12.81□□□□□ -0.36
CRAT-207ENST00000458362 PANO1I0J062 215 aa12.79□□□□□ -0.36
CRAT-207ENST00000458362 H0Y9J4 135 aa12.79□□□□□ -0.36
CRAT-207ENST00000458362 SPRR1BP22528 89 aa12.79□□□□□ -0.36
CRAT-207ENST00000458362 SMIM26A0A096LP01 95 aa12.78□□□□□ -0.36
CRAT-207ENST00000458362 NBDYA0A0U1RRE5 68 aa12.77□□□□□ -0.36
CRAT-207ENST00000458362 RPL37AP61513 92 aaKnown RBP12.77□□□□□ -0.36
CRAT-207ENST00000458362 LINC00474Q9P2X8 69 aa12.77□□□□□ -0.37
CRAT-207ENST00000458362 ZCCHC13Q8WW36 166 aaKnown RBP12.76□□□□□ -0.37
CRAT-207ENST00000458362 Q6ZRN7 208 aaPredicted RBP12.75□□□□□ -0.37
CRAT-207ENST00000458362 PLECQ15149 4684 aaKnown RBP12.75□□□□□ -0.37
CRAT-207ENST00000458362 WFDC13Q8IUB5 93 aa12.74□□□□□ -0.37
CRAT-207ENST00000458362 FAM229BQ4G0N7 80 aa12.73□□□□□ -0.37
CRAT-207ENST00000458362 MDFIQ99750 246 aa12.72□□□□□ -0.37
CRAT-207ENST00000458362 PKIGQ9Y2B9 76 aa12.71□□□□□ -0.37
CRAT-207ENST00000458362 KRTAP13-1Q8IUC0 172 aa12.69□□□□□ -0.38
CRAT-207ENST00000458362 NUPR2A6NF83 97 aa12.68□□□□□ -0.38
CRAT-207ENST00000458362 KRTAP29-1A8MX34 341 aaPredicted RBP12.67□□□□□ -0.38
CRAT-207ENST00000458362 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.66□□□□□ -0.38
CRAT-207ENST00000458362 LINC00472Q9H8W2 130 aa12.65□□□□□ -0.38
CRAT-207ENST00000458362 PRR15Q8IV56 129 aa12.63□□□□□ -0.39
CRAT-207ENST00000458362 SPACA4Q8TDM5 124 aa12.63□□□□□ -0.39
CRAT-207ENST00000458362 A8MWP4 228 aa12.6□□□□□ -0.39
CRAT-207ENST00000458362 CASC2Q6XLA1 102 aa12.6□□□□□ -0.39
CRAT-207ENST00000458362 VPS13DQ5THJ4 4388 aa12.58□□□□□ -0.39
CRAT-207ENST00000458362 hDV103S1A0JD37 113 aa12.58□□□□□ -0.4
CRAT-207ENST00000458362 LINC00336Q6ZUF6 198 aa12.57□□□□□ -0.4
CRAT-207ENST00000458362 MPLKIPQ8TAP9 179 aa12.57□□□□□ -0.4
CRAT-207ENST00000458362 STARD9Q9P2P6 4700 aa12.56□□□□□ -0.4
CRAT-207ENST00000458362 A0A087WTM6 91 aa12.55□□□□□ -0.4
CRAT-207ENST00000458362 IGLV9-49A0A0B4J1Y8 123 aa12.55□□□□□ -0.4
CRAT-207ENST00000458362 C1orf64Q8NEQ6 169 aa12.55□□□□□ -0.4
CRAT-207ENST00000458362 PRR4Q16378 134 aa12.54□□□□□ -0.4
CRAT-207ENST00000458362 MP68P56378 58 aa12.53□□□□□ -0.4
CRAT-207ENST00000458362 LINC00208Q96KT6 92 aa12.53□□□□□ -0.4
CRAT-207ENST00000458362 PRKDCP78527 4128 aaKnown RBP12.51□□□□□ -0.41
CRAT-207ENST00000458362 TRAV22A0A0B4J277 110 aa12.51□□□□□ -0.41
CRAT-207ENST00000458362 MMP24-AS1A0A0U1RRL7 71 aa12.5□□□□□ -0.41
CRAT-207ENST00000458362 H0Y9P7 68 aa12.5□□□□□ -0.41
CRAT-207ENST00000458362 Q96NJ1 140 aa12.49□□□□□ -0.41
CRAT-207ENST00000458362 LINC00483Q53H64 154 aa12.49□□□□□ -0.41
CRAT-207ENST00000458362 CYP4F30PQ9H0H9 118 aa12.49□□□□□ -0.41
CRAT-207ENST00000458362 HECTD4Q9Y4D8 3996 aa12.48□□□□□ -0.41
CRAT-207ENST00000458362 RTL8CO15255 209 aa12.47□□□□□ -0.41
CRAT-207ENST00000458362 NDUFB1O75438 58 aa12.46□□□□□ -0.41
CRAT-207ENST00000458362 PSORS1C2Q9UIG4 136 aa12.46□□□□□ -0.42
CRAT-207ENST00000458362 MOBPQ13875 183 aa12.44□□□□□ -0.42
CRAT-207ENST00000458362 IGLV5-52A0A0A0MRZ9 124 aa12.42□□□□□ -0.42
CRAT-207ENST00000458362 ANAPC11Q9NYG5 84 aa12.42□□□□□ -0.42
CRAT-207ENST00000458362 WWC2-AS2Q96NR7 200 aa12.42□□□□□ -0.42
CRAT-207ENST00000458362 Q6ZR54 194 aa12.41□□□□□ -0.42
CRAT-207ENST00000458362 KMT2AQ03164 3969 aa12.41□□□□□ -0.42
CRAT-207ENST00000458362 DNAH17Q9UFH2 4485 aa12.41□□□□□ -0.42
CRAT-207ENST00000458362 H3BPC8 53 aa12.4□□□□□ -0.42
CRAT-207ENST00000458362 PRO0628Q9UI54 55 aa12.4□□□□□ -0.42
CRAT-207ENST00000458362 PLAC8Q9NZF1 115 aa12.4□□□□□ -0.42
CRAT-207ENST00000458362 ZNF706Q9Y5V0 76 aaPredicted RBP12.39□□□□□ -0.43
CRAT-207ENST00000458362 DNAH8Q96JB1 4490 aa12.38□□□□□ -0.43
CRAT-207ENST00000458362 DNAH2Q9P225 4427 aa12.37□□□□□ -0.43
CRAT-207ENST00000458362 ASB16-AS1Q495Z4 193 aa12.36□□□□□ -0.43
CRAT-207ENST00000458362 FBN3Q75N90 2809 aa12.36□□□□□ -0.43
CRAT-207ENST00000458362 ZNF861PO60384 105 aa12.35□□□□□ -0.43
CRAT-207ENST00000458362 Q1T7F1 81 aa12.34□□□□□ -0.43
CRAT-207ENST00000458362 C8orf17Q9NRJ1 99 aa12.34□□□□□ -0.43
CRAT-207ENST00000458362 MEGF8Q7Z7M0 2845 aa12.33□□□□□ -0.44
CRAT-207ENST00000458362 SPANXA2-OT1Q8N9U9 137 aa12.33□□□□□ -0.44
CRAT-207ENST00000458362 BRK1Q8WUW1 75 aa12.33□□□□□ -0.44
CRAT-207ENST00000458362 FRAS1Q86XX4 4008 aa12.3□□□□□ -0.44
CRAT-207ENST00000458362 IGHV6-1A0A0B4J1U7 121 aa12.3□□□□□ -0.44
CRAT-207ENST00000458362 A0A1B0GVX0 72 aa12.29□□□□□ -0.44
CRAT-207ENST00000458362 TGP01266 2768 aa12.28□□□□□ -0.44
CRAT-207ENST00000458362 C1orf134Q5TEV5 83 aa12.26□□□□□ -0.45
CRAT-207ENST00000458362 A0A087X002 238 aa12.25□□□□□ -0.45
CRAT-207ENST00000458362 NOTCH2NLQ7Z3S9 236 aa12.25□□□□□ -0.45
CRAT-207ENST00000458362 TP53AIP1Q9HCN2 124 aa12.24□□□□□ -0.45
CRAT-207ENST00000458362 PSPHP1O15172 72 aa12.22□□□□□ -0.45
CRAT-207ENST00000458362 IGLV7-43P04211 117 aa12.22□□□□□ -0.45
CRAT-207ENST00000458362 CDK2AP2O75956 126 aa12.22□□□□□ -0.45
CRAT-207ENST00000458362 NDUFS5O43920 106 aa12.21□□□□□ -0.46
CRAT-207ENST00000458362 PCOTHQ58A44 107 aa12.21□□□□□ -0.46
CRAT-207ENST00000458362 CD164Q04900 197 aa12.19□□□□□ -0.46
CRAT-207ENST00000458362 IGLV7-46A0A075B6I9 117 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms